RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 TSR3Q9UJK0 312 aaKnown RBP10.07□□□□□ -0.8
RFX3-210ENST00000457373 BTBD3Q9Y2F9 522 aa10.07□□□□□ -0.8
RFX3-210ENST00000457373 AAR2Q9Y312 384 aaKnown RBP10.07□□□□□ -0.8
RFX3-210ENST00000457373 ZNF711Q9Y462 761 aa10.07□□□□□ -0.8
RFX3-210ENST00000457373 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.07□□□□□ -0.8
RFX3-210ENST00000457373 K7ESM1 405 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 CACNB4O00305 520 aaPredicted RBP10.06□□□□□ -0.8
RFX3-210ENST00000457373 TOR1BO14657 336 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 SCAMP1O15126 338 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 YKT6O15498 198 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 FLRT2O43155 660 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 PCDHGA12O60330 932 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 GCATO75600 419 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 METTL18O95568 372 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 IFNB1P01574 187 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 ATXN1LP0C7T5 689 aaKnown RBP10.06□□□□□ -0.8
RFX3-210ENST00000457373 CSRP1P21291 193 aaKnown RBP10.06□□□□□ -0.8
RFX3-210ENST00000457373 HTR1BP28222 390 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 STIP1P31948 543 aaKnown RBP10.06□□□□□ -0.8
RFX3-210ENST00000457373 STC1P52823 247 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 EIF2B5Q13144 721 aaKnown RBP10.06□□□□□ -0.8
RFX3-210ENST00000457373 OLIG2Q13516 323 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 SPARCL1Q14515 664 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 NFATC4Q14934 902 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 CCNG2Q16589 344 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 PARP6Q2NL67 630 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 SIRPB2Q5JXA9 342 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 FAXCQ5TGI0 409 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 PSAPL1Q6NUJ1 521 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 ESRP1Q6NXG1 681 aaKnown RBP10.06□□□□□ -0.8
RFX3-210ENST00000457373 NYAP1Q6ZVC0 841 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 RD3Q7Z3Z2 195 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 PIP4P1Q86T03 277 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 PRUNE1Q86TP1 453 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 PARGQ86W56 976 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 EID2Q8N6I1 236 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 SAP25Q8TEE9 199 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 SCAMP4Q969E2 229 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 TSACCQ96A04 125 aaPredicted RBP10.06□□□□□ -0.8
RFX3-210ENST00000457373 FUBP1Q96AE4 644 aaKnown RBP10.06□□□□□ -0.8
RFX3-210ENST00000457373 MS4A14Q96JA4 679 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 AGAP2Q99490 1192 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 ARHGAP9Q9BRR9 750 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 RIOK2Q9BVS4 552 aaKnown RBP10.06□□□□□ -0.8
RFX3-210ENST00000457373 FSD1LQ9BXM9 530 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 ZFYVE1Q9HBF4 777 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 MAGEE1Q9HCI5 957 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 GPR27Q9NS67 375 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 PKD2L2Q9NZM6 624 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 PCDHGB2Q9Y5G2 931 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 SPO11Q9Y5K1 396 aa10.06□□□□□ -0.8
RFX3-210ENST00000457373 SPAARA0A1B0GVQ0 90 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 H3BM21 787 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 AURKAO14965 403 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 PIAS2O75928 621 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 EPOP01588 193 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 CSF2P04141 144 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 ETS1P14921 441 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 TSHRP16473 764 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 HLA-DPA1P20036 260 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 ACTN2P35609 894 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 KCNJ1P48048 391 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 SPINT3P49223 89 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 GNG11P61952 73 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 HNRNPKP61978 463 aaKnown RBP eCLIP10.05□□□□□ -0.8
RFX3-210ENST00000457373 PPARDQ03181 441 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 C1orf61Q13536 156 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 OASLQ15646 514 aaKnown RBP10.05□□□□□ -0.8
RFX3-210ENST00000457373 SLC1A5Q15758 541 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 P3H1Q32P28 736 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 ALS2CLQ60I27 953 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 MACC1Q6ZN28 852 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 DBX2Q6ZNG2 339 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 TMC3Q7Z5M5 1100 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 HEATR4Q86WZ0 1026 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 HID1Q8IV36 788 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 PHACTR4Q8IZ21 702 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 NRSN1Q8IZ57 195 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 RBFAQ8N0V3 343 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 RASGEF1CQ8N431 466 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 BLOC1S5Q8TDH9 187 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 LMX1AQ8TE12 382 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 LRRC45Q96CN5 670 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 EID2BQ96D98 161 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 WDR92Q96MX6 357 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 WDR24Q96S15 920 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 OSBPL9Q96SU4 736 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 LGR4Q9BXB1 951 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 TCEAL2Q9H3H9 227 aaPredicted RBP10.05□□□□□ -0.8
RFX3-210ENST00000457373 FAM83DQ9H4H8 585 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 WDR26Q9H7D7 661 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 BPIFA1Q9NP55 256 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 PHPT1Q9NRX4 125 aaPredicted RBP10.05□□□□□ -0.8
RFX3-210ENST00000457373 UCKL1Q9NWZ5 548 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 SMARCAL1Q9NZC9 954 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 KLQ9UEF7 1012 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 KLF15Q9UIH9 416 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 PCOLCE2Q9UKZ9 415 aa10.05□□□□□ -0.8
RFX3-210ENST00000457373 PNMA8BQ9ULN7 279 aaPredicted RBP10.05□□□□□ -0.8
RFX3-210ENST00000457373 LRP4O75096 1905 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms