RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 GTSE1Q9NYZ3 720 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 MTF2Q9Y483 593 aaPredicted RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 VGLL3A8MV65 326 aa19.52■□□□□ 0.72
CDH5-204ENST00000563425 PRRG1O14668 218 aa19.52■□□□□ 0.72
CDH5-204ENST00000563425 LATS1O95835 1130 aa19.52■□□□□ 0.72
CDH5-204ENST00000563425 THRAP10827 490 aa19.52■□□□□ 0.72
CDH5-204ENST00000563425 PPARGP37231 505 aaPredicted RBP19.52■□□□□ 0.72
CDH5-204ENST00000563425 KCNC1P48547 511 aa19.52■□□□□ 0.72
CDH5-204ENST00000563425 ARF5P84085 180 aa19.52■□□□□ 0.72
CDH5-204ENST00000563425 GALNT1Q10472 559 aaPredicted RBP19.52■□□□□ 0.72
CDH5-204ENST00000563425 FAR2Q96K12 515 aa19.52■□□□□ 0.72
CDH5-204ENST00000563425 AARSD1Q9BTE6 412 aaKnown RBP19.52■□□□□ 0.72
CDH5-204ENST00000563425 RGSL1A5PLK6 1076 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 SDHDO14521 159 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 ZMPSTE24O75844 475 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 CD160O95971 181 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 IMPDH1P20839 514 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 PMLP29590 882 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 VHLP40337 213 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 PEX6Q13608 980 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 TAF11Q15544 211 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 GLT6D1Q7Z4J2 308 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 TCEAL8Q8IYN2 117 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 DEFB107AQ8IZN7 70 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 MDGA1Q8NFP4 955 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 OR4K2Q8NGD2 314 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 L3HYPDHQ96EM0 354 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 RC3H2Q9HBD1 1191 aaKnown RBP19.51■□□□□ 0.71
CDH5-204ENST00000563425 SMPD4Q9NXE4 827 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 C1RP00736 705 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 PDHA1P08559 390 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 MBL2P11226 248 aaPredicted RBP19.51■□□□□ 0.71
CDH5-204ENST00000563425 CD1DP15813 335 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 PLK1P53350 603 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 SESN3P58005 492 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 SMAD3P84022 425 aaKnown RBP19.51■□□□□ 0.71
CDH5-204ENST00000563425 NFKB2Q00653 900 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 SATB1Q01826 763 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 NXNQ6DKJ4 435 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 AFTPHQ6ULP2 937 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 GIMAP7Q8NHV1 300 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 SHKBP1Q8TBC3 707 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 DTX3LQ8TDB6 740 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 NRG4Q8WWG1 115 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 PTERQ96BW5 349 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 PHF21BQ96EK2 531 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 CATSPER2Q96P56 530 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 GSTO2Q9H4Y5 243 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 POLR3BQ9NW08 1133 aaPredicted RBP19.51■□□□□ 0.71
CDH5-204ENST00000563425 CDH22Q9UJ99 828 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 RAI2Q9Y5P3 530 aa19.51■□□□□ 0.71
CDH5-204ENST00000563425 C2orf81A6NN90 581 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 URODP06132 367 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 PRSS56P0CW18 603 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 CD1EP15812 388 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 ZNF37AP17032 561 aaPredicted RBP19.5■□□□□ 0.71
CDH5-204ENST00000563425 ELF1P32519 619 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 EPHB3P54753 998 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 CMPK2Q5EBM0 449 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 C1orf53Q5VUE5 145 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 TMEM198Q66K66 360 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 LRRC74BQ6ZQY2 392 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 TMCO2Q7Z6W1 182 aaPredicted RBP19.5■□□□□ 0.71
CDH5-204ENST00000563425 DDX53Q86TM3 631 aaKnown RBP19.5■□□□□ 0.71
CDH5-204ENST00000563425 SNX32Q86XE0 403 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 AFAP1L2Q8N4X5 818 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 RP9Q8TA86 221 aaKnown RBP19.5■□□□□ 0.71
CDH5-204ENST00000563425 CYP2S1Q96SQ9 504 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 LBHD1Q9BQE6 289 aaPredicted RBP19.5■□□□□ 0.71
CDH5-204ENST00000563425 TRMOQ9BU70 441 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 TRPC7Q9HCX4 862 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 G3BP2Q9UN86 482 aaKnown RBP19.5■□□□□ 0.71
CDH5-204ENST00000563425 PCDHGC4Q9Y5F7 938 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 INSL5Q9Y5Q6 135 aa19.5■□□□□ 0.71
CDH5-204ENST00000563425 SNAP91O60641 907 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 TBL1XO60907 577 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 TMCC1O94876 653 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 RFC2P35250 354 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 HERC3Q15034 1050 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 FAM117BQ6P1L5 589 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 RPS27LQ71UM5 84 aaKnown RBP19.49■□□□□ 0.71
CDH5-204ENST00000563425 CUZD1Q86UP6 607 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 LPCAT1Q8NF37 534 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 CEP70Q8NHQ1 597 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 LPGAT1Q92604 370 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 SLC22A12Q96S37 553 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 TCF12Q99081 682 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 ADGRE3Q9BY15 652 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 TNFRSF12AQ9NP84 129 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 SPG21Q9NZD8 308 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 WASF2Q9Y6W5 498 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 ABHD14A-ACY1A0A1B0GW23 586 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 ANKRD66B4E2M5 251 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 H0Y626 953 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 LAG3P18627 525 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 LPOP22079 712 aaPredicted RBP19.49■□□□□ 0.71
CDH5-204ENST00000563425 CDC25CP30307 473 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 EPHB1P54762 984 aa19.49■□□□□ 0.71
CDH5-204ENST00000563425 TBL3Q12788 808 aaKnown RBP19.49■□□□□ 0.71
CDH5-204ENST00000563425 ZNF678Q5SXM1 525 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 450 ms