RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CAPN8A6NHC0 703 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 TRPC5OSA6NMA1 111 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 F5H5T6 163 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 TRIM38O00635 465 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 ZBTB14O43829 449 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 ACSL4O60488 711 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 TACR2P21452 398 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 ADRA1AP35348 466 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 NUDT2P50583 147 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 TRAP1Q12931 704 aaKnown RBP18.36■□□□□ 0.53
SDC2-202ENST00000518385 VEPH1Q14D04 833 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 LRRC36Q1X8D7 754 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 TBC1D25Q3MII6 688 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 MARC1Q5VT66 337 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 RAP1GAP2Q684P5 730 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 LILRA6Q6PI73 481 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 RBM44Q6ZP01 1051 aaKnown RBP18.36■□□□□ 0.53
SDC2-202ENST00000518385 DCLK2Q8N568 766 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 USP33Q8TEY7 942 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 POF1BQ8WVV4 589 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 ZNF669Q96BR6 464 aaPredicted RBP18.36■□□□□ 0.53
SDC2-202ENST00000518385 ZNF512Q96ME7 567 aaPredicted RBP18.36■□□□□ 0.53
SDC2-202ENST00000518385 ZNF599Q96NL3 588 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 RPRD1AQ96P16 312 aaPredicted RBP18.36■□□□□ 0.53
SDC2-202ENST00000518385 TCF25Q9BQ70 676 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 OSBPL11Q9BXB4 747 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 CCSER2Q9H7U1 834 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 ARNT2Q9HBZ2 717 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 C8orf4Q9NR00 106 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 CHCHD3Q9NX63 227 aaKnown RBP18.36■□□□□ 0.53
SDC2-202ENST00000518385 SUCOQ9UBS9 1254 aaKnown RBP18.36■□□□□ 0.53
SDC2-202ENST00000518385 MAGED2Q9UNF1 606 aaPredicted RBP18.36■□□□□ 0.53
SDC2-202ENST00000518385 CDYLQ9Y232 598 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.35■□□□□ 0.53
SDC2-202ENST00000518385 RAMP2O60895 175 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 USP12O75317 370 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 PEX11BO96011 259 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 HLA-DQB2P05538 268 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 TXNL4AP83876 142 aaKnown RBP18.35■□□□□ 0.53
SDC2-202ENST00000518385 SULT2A1Q06520 285 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 ILF2Q12905 390 aaKnown RBP18.35■□□□□ 0.53
SDC2-202ENST00000518385 UGP2Q16851 508 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 CERCAMQ5T4B2 595 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 AFAP1L2Q8N4X5 818 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 ZNF781Q8N8C0 355 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 MRPL43Q8N983 215 aaKnown RBP18.35■□□□□ 0.53
SDC2-202ENST00000518385 IGSF8Q969P0 613 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 SAMD11Q96NU1 681 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 BIRC8Q96P09 236 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 FCRL3Q96P31 734 aaPredicted RBP18.35■□□□□ 0.53
SDC2-202ENST00000518385 EMILIN2Q9BXX0 1053 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 PRKD2Q9BZL6 878 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 SP110Q9HB58 689 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 TUBA8Q9NY65 449 aaPredicted RBP18.35■□□□□ 0.53
SDC2-202ENST00000518385 UXTQ9UBK9 157 aaPredicted RBP18.35■□□□□ 0.53
SDC2-202ENST00000518385 YIPF1Q9Y548 306 aa18.35■□□□□ 0.53
SDC2-202ENST00000518385 A0A096LPK6 155 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 LOC100653049A0A140TA62 436 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 ZNF701M0R085 212 aaPredicted RBP18.34■□□□□ 0.53
SDC2-202ENST00000518385 PRRG1O14668 218 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 TGM5O43548 720 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 NPHS1O60500 1241 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 KRT34O76011 436 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 ADH1AP07327 375 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 CA3P07451 260 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 HMGA1P17096 107 aaKnown RBP18.34■□□□□ 0.53
SDC2-202ENST00000518385 CA8P35219 290 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 CSRP3P50461 194 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 HPCAP84074 193 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 ART3Q13508 389 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 DCTN2Q13561 401 aaKnown RBP18.34■□□□□ 0.53
SDC2-202ENST00000518385 POLD3Q15054 466 aaPredicted RBP18.34■□□□□ 0.53
SDC2-202ENST00000518385 NADK2Q4G0N4 442 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 ALFQ53S48 1182 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 PKN3Q6P5Z2 889 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 RANBP10Q6VN20 620 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 SPRED2Q7Z698 418 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 SNX32Q86XE0 403 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 RBM12BQ8IXT5 1001 aaKnown RBP18.34■□□□□ 0.53
SDC2-202ENST00000518385 HM13Q8TCT9 377 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 HMCESQ96FZ2 354 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 IMP4Q96G21 291 aaKnown RBP18.34■□□□□ 0.53
SDC2-202ENST00000518385 EFHD1Q9BUP0 239 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 NACA2Q9H009 215 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 MAGEH1Q9H213 219 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 TLR9Q9NR96 1032 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 AK5Q9Y6K8 562 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 NYNRINQ9P2P1 1898 aaKnown RBP18.34■□□□□ 0.53
SDC2-202ENST00000518385 CNTN5O94779 1100 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 C8BP07358 591 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 ZNF23P17027 643 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 PSMC3P17980 439 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 SERINC3Q13530 473 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 TAF12Q16514 161 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 SLC9B1Q4ZJI4 515 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 ERI1Q8IV48 349 aaKnown RBP18.34■□□□□ 0.53
SDC2-202ENST00000518385 PPHLN1Q8NEY8 458 aaKnown RBP18.34■□□□□ 0.53
SDC2-202ENST00000518385 NMD3Q96D46 503 aaKnown RBP18.34■□□□□ 0.53
SDC2-202ENST00000518385 GDF15Q99988 308 aa18.34■□□□□ 0.53
SDC2-202ENST00000518385 FSD1LQ9BXM9 530 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms