RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 NPFFR2Q9Y5X5 522 aa4.05□□□□□ -1.76
PVT1-211ENST00000521600 IKBKGQ9Y6K9 419 aa4.05□□□□□ -1.76
PVT1-211ENST00000521600 HELZP42694 1942 aaKnown RBP4.05□□□□□ -1.76
PVT1-211ENST00000521600 COL5A1P20908 1838 aaPredicted RBP4.05□□□□□ -1.76
PVT1-211ENST00000521600 MYO9AB2RTY4 2548 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 SCN1AP35498 2009 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 SF3B1O75533 1304 aaKnown RBP eCLIP4.04□□□□□ -1.769e-6■■■■■ 68.9
PVT1-211ENST00000521600 TRBV23OR9-2A0A075B6M9 112 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 IQANK1A0A1B0GTG1 560 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 TCRBV16S1A1N1A0A5B0 115 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 ARHGEF37A1IGU5 675 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 BCLAF3A2AJT9 711 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 CCT8L1PA6NM43 557 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 KPNA7A9QM74 516 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 HACD1B0YJ81 288 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 E7ESA3 106 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 K7ESF4 209 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 PIRO00625 290 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 XPO1O14980 1071 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 TM9SF1O15321 606 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 CHADO15335 359 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 CSDE1O75534 798 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 RECQL4O94761 1208 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 FBXO21O94952 628 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 EPN2O95208 641 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 ZWINTO95229 277 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 PAPLNO95428 1278 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 ZBED1O96006 694 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 JMJD7P0C870 316 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 ZSCAN5DPP0CG00 497 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 RBP3P10745 1247 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 TCF4P15884 667 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 WARSP23381 471 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 ALDH3A1P30838 453 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 RPL22P35268 128 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 GNL1P36915 607 aaPredicted RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 GRIK1P39086 918 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 ARL4AP40617 200 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 MSH2P43246 934 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 IFNAR2P48551 515 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 RPL34P49207 117 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 ZNF135P52742 658 aaPredicted RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 AIF1P55008 147 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 GPR85P60893 370 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 NTHL1P78549 312 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 BASP1P80723 227 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 CDK16Q00536 496 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 ACTN3Q08043 901 aaPredicted RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 ADCY1Q08828 1119 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 CCDC15Q0P6D6 951 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 SPARCL1Q14515 664 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 TESK1Q15569 626 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 CCDC142Q17RM4 750 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 CCDC14Q49A88 953 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 LACTB2Q53H82 288 aaPredicted RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 ANKRD20A8PQ5CZ79 823 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 XKR4Q5GH76 650 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 KCNT1Q5JUK3 1230 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 LGSNQ5TDP6 509 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 SLC9A4Q6AI14 798 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 TXNRD3NBQ6F5E7 133 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 SCYL2Q6P3W7 929 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 OLFML1Q6UWY5 402 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 VSTM1Q6UX27 236 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 RSPO2Q6UXX9 243 aaPredicted RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 CYP2R1Q6VVX0 501 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 RGS9BPQ6ZS82 235 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 C3orf62Q6ZUJ4 267 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 PDZD4Q76G19 769 aaPredicted RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 SLC26A9Q7LBE3 791 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 STRADAQ7RTN6 431 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 SPATA21Q7Z572 469 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 DDX53Q86TM3 631 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 ACOT1Q86TX2 421 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 TRABD2AQ86V40 505 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 ECHDC2Q86YB7 292 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 ZC3H7AQ8IWR0 971 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 LRRC34Q8IZ02 419 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 TMEM86AQ8N2M4 240 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 ARFGAP1Q8N6T3 406 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 EMC1Q8N766 993 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 NAT8LQ8N9F0 302 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 TMEM52Q8NDY8 209 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 FBXO36Q8NEA4 188 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 FAM172AQ8WUF8 416 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 SLC35F5Q8WV83 523 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 CPT1BQ92523 772 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 SMG7Q92540 1137 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 FAF2Q96CS3 445 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 RTP4Q96DX8 246 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 LRIG1Q96JA1 1093 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 FCRL2Q96LA5 508 aaPredicted RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 C9orf72Q96LT7 481 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 TWNKQ96RR1 684 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 ZFYVE21Q9BQ24 234 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 ELAC2Q9BQ52 826 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 KXD1Q9BQD3 176 aa4.04□□□□□ -1.76
PVT1-211ENST00000521600 MRPL45Q9BRJ2 306 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 EIF2AQ9BY44 585 aaKnown RBP4.04□□□□□ -1.76
PVT1-211ENST00000521600 MRPL9Q9BYD2 267 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms