RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TRIM6Q9C030 488 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 PLEKHA5Q9HAU0 1116 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 SPAG4Q9NPE6 437 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 VPS18Q9P253 973 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 FBXO2Q9UK22 296 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 PCDHGB5Q9Y5G0 923 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 PLCH2O75038 1416 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 PRG4Q92954 1404 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 ATP10DQ9P241 1426 aa4.63□□□□□ -1.67
HMGB1P16-201ENST00000447155 PXDNLA1KZ92 1463 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 ADGRB3O60242 1522 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 ADGRB1O14514 1584 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 NRKQ7Z2Y5 1582 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 C17orf102A2RUQ5 167 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 PI4KAP2A4QPH2 592 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 NPIPB15A6NHN6 443 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 FAM157AC9JC47 383 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 E5RJQ4 531 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 EBAG9O00559 213 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 TACC1O75410 805 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 IPO7O95373 1038 aaKnown RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 SCGB1D1O95968 90 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 GALTP07902 379 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 EZRP15311 586 aaKnown RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 GCFC2P16383 781 aaKnown RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 FMO4P31512 558 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 DPP6P42658 865 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 POLD2P49005 469 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 NAP1L1P55209 391 aaKnown RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 EVCP57679 992 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 CYP4A11Q02928 519 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZNF91Q05481 1191 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 NEXNQ0ZGT2 675 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 CRYMQ14894 314 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLMAPQ14BN4 828 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 ENTPD8Q5MY95 495 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 CCDC73Q6ZRK6 1079 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 B4GALNT4Q76KP1 1039 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 YTHDF3Q7Z739 585 aaKnown RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 TRIM74Q86UV6 250 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 TRIM73Q86UV7 250 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 FAM160B2Q86V87 743 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 TMC8Q8IU68 726 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLC25A41Q8N5S1 370 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 SLC44A5Q8NCS7 719 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZMIZ2Q8NF64 920 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 KCNG4Q8TDN1 519 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 AFAP1L1Q8TED9 768 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 GDPD5Q8WTR4 605 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 ITFG2Q969R8 447 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 CCDC34Q96HJ3 373 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZNF419Q96HQ0 510 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 CHCHD6Q9BRQ6 235 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 WDR83Q9BRX9 315 aaKnown RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 UBXN6Q9BZV1 441 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 PRSS22Q9GZN4 317 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 RANBP17Q9H2T7 1088 aaKnown RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 CLSTN2Q9H4D0 955 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 AAMDCQ9H7C9 122 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 SUDS3Q9H7L9 328 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 PNRC2Q9NPJ4 139 aaKnown RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 THSD1Q9NS62 852 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 KRT84Q9NSB2 600 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 SNTG1Q9NSN8 517 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 C20orf141Q9NUB4 165 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 PDRG1Q9NUG6 133 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 ANO10Q9NW15 660 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 BABAM1Q9NWV8 329 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 HSPB7Q9UBY9 170 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 SWAP70Q9UH65 585 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 CDH22Q9UJ99 828 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 PARP4Q9UKK3 1724 aaKnown RBP4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 ARHGEF10O15013 1369 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 ATP7BP35670 1465 aa4.62□□□□□ -1.67
HMGB1P16-201ENST00000447155 AKAP12Q02952 1782 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 CHUKO15111 745 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 LDLRAD4O15165 306 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 TLX3O43711 291 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 TLR2O60603 784 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 KINO60870 393 aaKnown RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 ZBED4O75132 1171 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 CNOT3O75175 753 aaKnown RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 RNASEH2AO75792 299 aaKnown RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 SEC14L2O76054 403 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 UNGP13051 313 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 POU1F1P28069 291 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 BSGP35613 385 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 CPOXP36551 454 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 CTCFP49711 727 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 RPL7AP62424 266 aaKnown RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 IFFO1Q0D2I5 559 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 LRMPQ12912 555 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 DCTN2Q13561 401 aaKnown RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 TAF11Q15544 211 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 SUPT20HL1Q3ZLR7 823 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 PIK3CD-AS1Q5SR53 167 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 C6orf10Q5SRN2 563 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 SERTAD4-AS1Q5TG53 156 aa4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 RBM43Q6ZSC3 357 aaKnown RBP4.61□□□□□ -1.67
HMGB1P16-201ENST00000447155 MOB3CQ70IA8 216 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms