RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 UBXN1Q04323 297 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 GRM3Q14832 879 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 NCAPHQ15003 741 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 KIF26BQ2KJY2 2108 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 KCTD16Q68DU8 428 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 MON1BQ7L1V2 547 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 TAF8Q7Z7C8 310 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 LUZP1Q86V48 1076 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 CCNJLQ8IV13 435 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 UMODL1-AS1Q8N2C9 162 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 PLA2G15Q8NCC3 412 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 SNRNP27Q8WVK2 155 aaKnown RBP11.55□□□□□ -0.56
RAB5C-203ENST00000546881 MED8Q96G25 268 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 LRRN3Q9H3W5 708 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 SUDS3Q9H7L9 328 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-203ENST00000546881 MRPL40Q9NQ50 206 aaKnown RBP11.55□□□□□ -0.56
RAB5C-203ENST00000546881 LIMA1Q9UHB6 759 aaKnown RBP11.55□□□□□ -0.56
RAB5C-203ENST00000546881 ATXN7L1Q9ULK2 861 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-203ENST00000546881 ATP8A1Q9Y2Q0 1164 aa11.55□□□□□ -0.56
RAB5C-203ENST00000546881 MGAQ8IWI9 3026 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 A0A1W2PQM1 296 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 TSPAN11A1L157 253 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 LGALS16A8MUM7 142 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 WASH4PA8MWX3 477 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 A8MX80 341 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 TMX2-CTNND1H3BSU7 103 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 DAPK3O43293 454 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 BUB1BO60566 1050 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-203ENST00000546881 PALMO75781 387 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 ATP1A3P13637 1013 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 SERPINA4P29622 427 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 MMP12P39900 470 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 PAPOLAP51003 745 aaKnown RBP11.54□□□□□ -0.56
RAB5C-203ENST00000546881 GSCP56915 257 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-203ENST00000546881 EIF3IQ13347 325 aaKnown RBP11.54□□□□□ -0.56
RAB5C-203ENST00000546881 MTM1Q13496 603 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 TGIF1Q15583 401 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 BRAT1Q6PJG6 821 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 USP53Q70EK8 1073 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 PRICKLE2Q7Z3G6 844 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 SRLQ86TD4 932 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 ZSWIM9Q86XI8 627 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 FAM46DQ8NEK8 389 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 OR6C4Q8NGE1 309 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 OR56A4Q8NGH8 313 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 HCAR2Q8TDS4 363 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 OR1E3Q8WZA6 343 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 ZNF641Q96N77 438 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-203ENST00000546881 TMEM74Q96NL1 305 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 AGPAT1Q99943 283 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 ARHGAP9Q9BRR9 750 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 CNPY3Q9BT09 278 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 CINPQ9BW66 212 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-203ENST00000546881 DPEP2Q9H4A9 486 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 DHX35Q9H5Z1 703 aaKnown RBP11.54□□□□□ -0.56
RAB5C-203ENST00000546881 ATP13A3Q9H7F0 1226 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 SP110Q9HB58 689 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 PDFQ9HBH1 243 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 SIK3Q9Y2K2 1263 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 SSUH2Q9Y2M2 353 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 LOXL2Q9Y4K0 774 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 CFAP46Q8IYW2 2715 aa11.54□□□□□ -0.56
RAB5C-203ENST00000546881 LRRK1Q38SD2 2015 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 ANKRD36A6QL64 1941 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 TMEM202A6NGA9 273 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 ARHGAP42A6NI28 874 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 TMCO5BA8MYB1 307 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 DFFAO00273 331 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 EEF2KO00418 725 aaKnown RBP11.53□□□□□ -0.56
RAB5C-203ENST00000546881 TEX33O43247 280 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 PRAMEF11O60813 436 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 RECQL5O94762 991 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-203ENST00000546881 ELFN1P0C7U0 828 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 ITIH1P19827 911 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 RGRP47804 291 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 MAPK10P53779 464 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 AIF1P55008 147 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 BCL2L1Q07817 233 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 NFATC3Q12968 1075 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 SRSF6Q13247 344 aaKnown RBP11.53□□□□□ -0.56
RAB5C-203ENST00000546881 ARHGEF7Q14155 803 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 PHF19Q5T6S3 580 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 SFTPA2Q8IWL1 248 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 TSEN2Q8NCE0 465 aaKnown RBP11.53□□□□□ -0.56
RAB5C-203ENST00000546881 FUBP1Q96AE4 644 aaKnown RBP11.53□□□□□ -0.56
RAB5C-203ENST00000546881 TUBGCP5Q96RT8 1024 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 RBM15Q96T37 977 aaKnown RBP eCLIP11.53□□□□□ -0.56
RAB5C-203ENST00000546881 SLC39A8Q9C0K1 460 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 LRRC19Q9H756 370 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 CYP4F12Q9HCS2 524 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 FGF22Q9HCT0 170 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 DONSONQ9NYP3 566 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 PCSK1NQ9UHG2 260 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 AP4E1Q9UPM8 1137 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 PCDHGA7Q9Y5G6 932 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 HEMK1Q9Y5R4 338 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-203ENST00000546881 RNF215Q9Y6U7 377 aa11.53□□□□□ -0.56
RAB5C-203ENST00000546881 LRP4O75096 1905 aa11.52□□□□□ -0.56
RAB5C-203ENST00000546881 TCRBV5S1A1TA0A578 114 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 EFSO43281 561 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms