RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 EFNA5P52803 228 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 RBM6P78332 1123 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SP2Q02086 613 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TCF15Q12870 199 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 RUNX2Q13950 521 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 CBFBQ13951 182 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 PGM5Q15124 567 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 AAK1Q2M2I8 961 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 GLE1Q53GS7 698 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 XKR9Q5GH70 373 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SH2D4BQ5SQS7 431 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 UTP14CQ5TAP6 766 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 RBM43Q6ZSC3 357 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 C1orf186Q6ZWK4 172 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ARMC9Q7Z3E5 817 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 C1orf210Q8IVY1 113 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 KDM8Q8N371 416 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 DBF4BQ8NFT6 615 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SUN3Q8TAQ9 357 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 RAB40AQ8WXH6 277 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 CNOT9Q92600 299 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 THRSPQ92748 146 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 BCL2L2Q92843 193 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 EXTL1Q92935 676 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 MMABQ96EY8 250 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ZNF503Q96F45 646 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 FBXL20Q96IG2 436 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SPATA13Q96N96 652 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 HIST1H2AAQ96QV6 131 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 MOV10L1Q9BXT6 1211 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 PUS3Q9BZE2 481 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SIK2Q9H0K1 926 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SERHL2Q9H4I8 314 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TMEM206Q9H813 350 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TRPV5Q9NQA5 729 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 PRMT8Q9NR22 394 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TCP11L1Q9NUJ3 509 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ING3Q9NXR8 418 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 CRNNQ9UBG3 495 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 PEMTQ9UBM1 199 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TRPC4Q9UBN4 977 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 GABRQQ9UN88 632 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 STX8Q9UNK0 236 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TNFSF13BQ9Y275 285 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SSX2IPQ9Y2D8 614 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 N6AMT1Q9Y5N5 214 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ZNF804BA4D1E1 1349 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 ZNF335Q9H4Z2 1342 aaPredicted RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 LRRIQ4A6NIV6 560 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 ADM5C9JUS6 153 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 IFNL4K9M1U5 179 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 KIF2AO00139 706 aaPredicted RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 RASGRF2O14827 1237 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 HS6ST1O60243 411 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 CYTIPO60759 359 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 MITFO75030 526 aaPredicted RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 VPS4BO75351 444 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 SPAG6O75602 509 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 IPO7O95373 1038 aaKnown RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 ABHD2P08910 425 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 GYPEP15421 78 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 CD9P21926 228 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 TCEA1P23193 301 aaKnown RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 PON1P27169 355 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 RBL1P28749 1068 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 TAGLN2P37802 199 aaKnown RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 GCLCP48506 637 aaPredicted RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 PGDP52209 483 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 LILRA4P59901 499 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 RPL15P61313 204 aaKnown RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 HHEXQ03014 270 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 TAP1Q03518 808 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 GFPT1Q06210 699 aaPredicted RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 GABPB1Q06547 395 aaPredicted RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 GPM6BQ13491 265 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 IQCB1Q15051 598 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 GSTA3Q16772 222 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 RNF151Q2KHN1 245 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 RIPPLY2Q5TAB7 128 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 KRT79Q5XKE5 535 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 GLDNQ6ZMI3 551 aaPredicted RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 C15orf39Q6ZRI6 1047 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 KRT27Q7Z3Y8 459 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 TAF8Q7Z7C8 310 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 DNAJC10Q8IXB1 793 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 ABRAQ8N0Z2 381 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 PDCL2Q8N4E4 241 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 OR7G3Q8NG95 312 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 OR52E1Q8NGJ3 308 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 METTL21AQ8WXB1 218 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 PSPC1Q8WXF1 523 aaKnown RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 WASF1Q92558 559 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 EDC3Q96F86 508 aaKnown RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 CNOT6LQ96LI5 555 aaKnown RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 SAMD8Q96LT4 415 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 ADAD1Q96M93 576 aaKnown RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 AGAP3Q96P47 875 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 PLEKHG4BQ96PX9 1271 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 PARK7Q99497 189 aaKnown RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 DPYSL5Q9BPU6 564 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms