RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 KLC3Q6P597 504 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 TRMT10BQ6PF06 316 aaKnown RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 ARPINQ7Z6K5 226 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 CPSF7Q8N684 471 aaKnown RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 PDZD8Q8NEN9 1154 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 IL12RB2Q99665 862 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 DDX50Q9BQ39 737 aaKnown RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 CASS4Q9NQ75 786 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 NSMCE4AQ9NXX6 385 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 ANKRD6Q9Y2G4 727 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 NR2E3Q9Y5X4 410 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 WDR27A2RRH5 827 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 RGSL1A5PLK6 1076 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 CCDC85CA6NKD9 419 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 H3BNX3 289 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 UGT1A9O60656 530 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 GLDCP23378 1020 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 PEX2P28328 305 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 GRIA1P42261 906 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 EPHB1P54762 984 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 CSE1LP55060 971 aaKnown RBP18.46■□□□□ 0.55
SDC2-202ENST00000518385 TAF10Q12962 218 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 ANO4Q32M45 955 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 ARTNQ5T4W7 220 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 IRAK1BP1Q5VVH5 260 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 NAPEPLDQ6IQ20 393 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 UNC5BQ8IZJ1 945 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 UMODL1-AS1Q8N2C9 162 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 MPP5Q8N3R9 675 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 TTC9BQ8N6N2 239 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 ARNTL2Q8WYA1 636 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 LRGUKQ96M69 825 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 FCRL5Q96RD9 977 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 SEPT5Q99719 369 aaPredicted RBP18.46■□□□□ 0.55
SDC2-202ENST00000518385 UGT1A7Q9HAW7 530 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 UGT1A10Q9HAW8 530 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 UGT1A8Q9HAW9 530 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 MARCH2Q9P0N8 246 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 SLC27A5Q9Y2P5 690 aa18.46■□□□□ 0.55
SDC2-202ENST00000518385 IGLV3-10A0A075B6K4 115 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 MEI4A8MW99 385 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 ITM2AO43736 263 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 ANXA9O76027 345 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 ABLIM3O94929 683 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 CLPTM1O96005 669 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 JCHAINP01591 159 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 IGLV3-27P01718 113 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 ASLP04424 464 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 URODP06132 367 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 CD68P34810 354 aaPredicted RBP18.45■□□□□ 0.54
SDC2-202ENST00000518385 ZBTB17Q13105 803 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 DUSP4Q13115 394 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 ADGRE1Q14246 886 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 CASC4Q6P4E1 433 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 KLHL23Q8NBE8 558 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 HAUS8Q9BT25 410 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 ZYG11BQ9C0D3 744 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 CRISPLD1Q9H336 500 aa18.45■□□□□ 0.54
SDC2-202ENST00000518385 MRPL17Q9NRX2 175 aaKnown RBP18.45■□□□□ 0.54
SDC2-202ENST00000518385 AFF4Q9UHB7 1163 aaKnown RBP18.45■□□□□ 0.54
SDC2-202ENST00000518385 LCHNA4D1U4 455 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 SLC38A8A6NNN8 435 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 DFFAO00273 331 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 MAFKO60675 156 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 LILRB3O75022 631 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 CCDC166P0CW27 439 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 MGAT1P26572 445 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 TYK2P29597 1187 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 BMPR1AP36894 532 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 POLD2P49005 469 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 EFEMP1Q12805 493 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 GRAMD1BQ3KR37 738 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 TPGS2Q68CL5 300 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 RNF111Q6ZNA4 994 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 ZCCHC23Q6ZST2 131 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 TMC7Q7Z402 723 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 C10orf107Q8IVU9 208 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 CCDC117Q8IWD4 279 aaPredicted RBP18.44■□□□□ 0.54
SDC2-202ENST00000518385 ZNF683Q8IZ20 524 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 SLC25A41Q8N5S1 370 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 KYQ8NBH2 561 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 NETO2Q8NC67 525 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 ZNF461Q8TAF7 563 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 ITFG2Q969R8 447 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 DCUN1D1Q96GG9 259 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 CELF6Q96J87 481 aaKnown RBP18.44■□□□□ 0.54
SDC2-202ENST00000518385 AGAP3Q96P47 875 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 CEP41Q9BYV8 373 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 SLC39A8Q9C0K1 460 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 IL22Q9GZX6 179 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 ZNF395Q9H8N7 513 aaPredicted RBP18.44■□□□□ 0.54
SDC2-202ENST00000518385 TMEM248Q9NWD8 314 aa18.44■□□□□ 0.54
SDC2-202ENST00000518385 DRGXA6NNA5 263 aa18.43■□□□□ 0.54
SDC2-202ENST00000518385 TIMM44O43615 452 aa18.43■□□□□ 0.54
SDC2-202ENST00000518385 TRIM13O60858 407 aa18.43■□□□□ 0.54
SDC2-202ENST00000518385 HSPA4LO95757 839 aa18.43■□□□□ 0.54
SDC2-202ENST00000518385 SMIM18P0DKX4 95 aa18.43■□□□□ 0.54
SDC2-202ENST00000518385 CTSAP10619 480 aa18.43■□□□□ 0.54
SDC2-202ENST00000518385 NFKB1P19838 968 aa18.43■□□□□ 0.54
SDC2-202ENST00000518385 SESN2P58004 480 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 728.7 ms