RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W TAF1P46677 1066 aa5.93□□□□□ -1.46
SCD6YPR129W RSC4Q02206 625 aa5.93□□□□□ -1.46
SCD6YPR129W TRE1Q08919 783 aa5.93□□□□□ -1.46
SCD6YPR129W THI80P35202 319 aa5.92□□□□□ -1.46
SCD6YPR129W ECM2P38241 364 aaKnown RBP5.92□□□□□ -1.46
SCD6YPR129W UTP22P53254 1237 aaPredicted RBP5.92□□□□□ -1.46
SCD6YPR129W REI1P38344 393 aaPredicted RBP5.91□□□□□ -1.46
SCD6YPR129W GIP4P39732 760 aa5.91□□□□□ -1.46
SCD6YPR129W UFD2P54860 961 aa5.91□□□□□ -1.46
SCD6YPR129W SSY1Q03770 852 aa5.91□□□□□ -1.46
SCD6YPR129W EAR1Q03212 550 aa5.9□□□□□ -1.46
SCD6YPR129W MSH6Q03834 1242 aa5.9□□□□□ -1.46
SCD6YPR129W ALG6Q12001 544 aaKnown RBP5.9□□□□□ -1.46
SCD6YPR129W YVC1Q12324 675 aa5.9□□□□□ -1.46
SCD6YPR129W PRP6P19735 899 aaPredicted RBP5.89□□□□□ -1.47
SCD6YPR129W DUR3P33413 735 aa5.89□□□□□ -1.47
SCD6YPR129W PEX7P39108 375 aa5.89□□□□□ -1.47
SCD6YPR129W LPX1Q12405 387 aaKnown RBP5.89□□□□□ -1.47
SCD6YPR129W NFS1P25374 497 aa5.87□□□□□ -1.47
SCD6YPR129W PRO1P32264 428 aa5.87□□□□□ -1.47
SCD6YPR129W SMY2P32909 740 aaKnown RBP5.87□□□□□ -1.47
SCD6YPR129W GLO3P38682 493 aaKnown RBP5.86□□□□□ -1.47
SCD6YPR129W NNK1P36003 928 aa5.85□□□□□ -1.47
SCD6YPR129W ARL1P38116 183 aaKnown RBP5.85□□□□□ -1.47
SCD6YPR129W SAP155P43612 1002 aa5.85□□□□□ -1.47
SCD6YPR129W YGR045CP53229 120 aa5.85□□□□□ -1.47
SCD6YPR129W FLR1P38124 548 aa5.84□□□□□ -1.47
SCD6YPR129W QDR1P40475 563 aa5.84□□□□□ -1.47
SCD6YPR129W ELA1P53861 379 aaPredicted RBP5.84□□□□□ -1.47
SCD6YPR129W HDA2Q06629 674 aa5.84□□□□□ -1.47
SCD6YPR129W PMT7Q06644 662 aa5.83□□□□□ -1.48
SCD6YPR129W AVO1Q08236 1176 aa5.83□□□□□ -1.48
SCD6YPR129W FLP1P03870 423 aa5.82□□□□□ -1.48
SCD6YPR129W AIM3P38266 947 aaKnown RBP5.82□□□□□ -1.48
SCD6YPR129W PTC7P38797 343 aa5.82□□□□□ -1.48
SCD6YPR129W MRPL22P53881 309 aa5.82□□□□□ -1.48
SCD6YPR129W YNL011CP53980 444 aa5.82□□□□□ -1.48
SCD6YPR129W KAR5Q04746 504 aa5.82□□□□□ -1.48
SCD6YPR129W BSC2Q05611 235 aa5.82□□□□□ -1.48
SCD6YPR129W YAF9P53930 226 aa5.81□□□□□ -1.48
SCD6YPR129W TY1A-LR4P0C2I8 440 aaKnown RBP5.8□□□□□ -1.48
SCD6YPR129W TY1A-DR6P0CX70 440 aa5.8□□□□□ -1.48
SCD6YPR129W TY1A-ER1P0CX71 440 aa5.8□□□□□ -1.48
SCD6YPR129W TY1A-LR2P0CX72 440 aa5.8□□□□□ -1.48
SCD6YPR129W TY1A-PLP0CX73 440 aa5.8□□□□□ -1.48
SCD6YPR129W TY1A-JR1P0CX74 440 aa5.8□□□□□ -1.48
SCD6YPR129W TY1A-LR3P0CX75 440 aa5.8□□□□□ -1.48
SCD6YPR129W TY1A-ML2P0CX76 440 aa5.8□□□□□ -1.48
SCD6YPR129W ATG1P53104 897 aa5.8□□□□□ -1.48
SCD6YPR129W NUT1P53114 1132 aa5.8□□□□□ -1.48
SCD6YPR129W RIM8P53179 542 aa5.8□□□□□ -1.48
SCD6YPR129W SUB2Q07478 446 aaKnown RBP5.8□□□□□ -1.48
SCD6YPR129W TY1A-GR1Q12085 440 aa5.8□□□□□ -1.48
SCD6YPR129W YDL177CQ12257 170 aa5.8□□□□□ -1.48
SCD6YPR129W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.8□□□□□ -1.48
SCD6YPR129W TY1A-OLQ92392 440 aaKnown RBP5.8□□□□□ -1.48
SCD6YPR129W GTS1P40956 396 aa5.79□□□□□ -1.48
SCD6YPR129W ACF4P47129 309 aa5.79□□□□□ -1.48
SCD6YPR129W CDC55Q00362 526 aa5.79□□□□□ -1.48
SCD6YPR129W TRS120Q04183 1289 aa5.79□□□□□ -1.48
SCD6YPR129W PUS7Q08647 676 aaKnown RBP5.79□□□□□ -1.48
SCD6YPR129W MNL2Q12205 849 aa5.78□□□□□ -1.48
SCD6YPR129W TPP1Q03796 238 aa5.77□□□□□ -1.49
SCD6YPR129W SOD2P00447 233 aa5.76□□□□□ -1.49
SCD6YPR129W MCM5P29496 775 aaKnown RBP5.76□□□□□ -1.49
SCD6YPR129W YKL077WP36081 392 aa5.76□□□□□ -1.49
SCD6YPR129W EXO5P38289 585 aa5.75□□□□□ -1.49
SCD6YPR129W ETP1P38748 585 aaKnown RBP5.75□□□□□ -1.49
SCD6YPR129W RVS167P39743 482 aaKnown RBP5.75□□□□□ -1.49
SCD6YPR129W TOD6P34219 525 aa5.73□□□□□ -1.49
SCD6YPR129W SHU2P38957 223 aa5.73□□□□□ -1.49
SCD6YPR129W SLS1P42900 643 aa5.73□□□□□ -1.49
SCD6YPR129W GIS1Q03833 894 aa5.73□□□□□ -1.49
SCD6YPR129W INP54Q08227 384 aaKnown RBP5.73□□□□□ -1.49
SCD6YPR129W SAM35P14693 329 aa5.72□□□□□ -1.49
SCD6YPR129W YHL012WP38709 493 aa5.72□□□□□ -1.49
SCD6YPR129W YAR028WP39548 234 aa5.72□□□□□ -1.49
SCD6YPR129W FOL2P51601 243 aaKnown RBP5.72□□□□□ -1.49
SCD6YPR129W RPL34AP87262 121 aaPredicted RBP5.72□□□□□ -1.49
SCD6YPR129W GSF2Q04697 403 aaKnown RBP5.72□□□□□ -1.49
SCD6YPR129W MDL2P33311 773 aa5.71□□□□□ -1.5
SCD6YPR129W NEM1P38757 446 aa5.71□□□□□ -1.5
SCD6YPR129W MON1P53129 644 aa5.71□□□□□ -1.5
SCD6YPR129W SNO2P53823 222 aa5.71□□□□□ -1.5
SCD6YPR129W YLR257WQ06146 321 aaKnown RBP5.71□□□□□ -1.5
SCD6YPR129W YPL277CQ08989 487 aa5.71□□□□□ -1.5
SCD6YPR129W RPS13P05756 151 aaKnown RBP5.7□□□□□ -1.5
SCD6YPR129W RET1P22276 1149 aaKnown RBP5.7□□□□□ -1.5
SCD6YPR129W MTR4P47047 1073 aaKnown RBP5.69□□□□□ -1.5
SCD6YPR129W HRK1Q08732 759 aaKnown RBP5.69□□□□□ -1.5
SCD6YPR129W HSE1P38753 452 aa5.68□□□□□ -1.5
SCD6YPR129W NOG1Q02892 647 aaKnown RBP5.68□□□□□ -1.5
SCD6YPR129W TRL1P09880 827 aaKnown RBP5.67□□□□□ -1.5
SCD6YPR129W NMD3P38861 518 aaKnown RBP5.67□□□□□ -1.5
SCD6YPR129W CLU1Q03690 1277 aaKnown RBP5.67□□□□□ -1.5
SCD6YPR129W RSA3Q05942 220 aaKnown RBP5.67□□□□□ -1.5
SCD6YPR129W NOC3Q07896 663 aaPredicted RBP5.67□□□□□ -1.5
SCD6YPR129W YLR358CO13565 187 aa5.66□□□□□ -1.5
SCD6YPR129W SRO9P25567 434 aaKnown RBP5.66□□□□□ -1.5
SCD6YPR129W ABZ1P37254 787 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 40 ms