RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	CUE3	P53137	624 aa	Known RBP	7.77	□□□□□ -1.17
SNT309	YPR101W	YGR130C	P53278	816 aa		7.77	□□□□□ -1.17
SNT309	YPR101W	HAT1	Q12341	374 aa		7.77	□□□□□ -1.17
SNT309	YPR101W	NOP14	Q99207	810 aa	Known RBP	7.77	□□□□□ -1.17
SNT309	YPR101W	PHO13	P19881	312 aa		7.76	□□□□□ -1.17
SNT309	YPR101W	STE11	P23561	717 aa		7.76	□□□□□ -1.17
SNT309	YPR101W	BMH2	P34730	273 aa	Known RBP	7.76	□□□□□ -1.17
SNT309	YPR101W	PSY4	P38193	441 aa		7.76	□□□□□ -1.17
SNT309	YPR101W	RPN10	P38886	268 aa	Known RBP	7.76	□□□□□ -1.17
SNT309	YPR101W	HCR1	Q05775	265 aa	Known RBP	7.76	□□□□□ -1.17
SNT309	YPR101W	IMH1	Q06704	911 aa	Known RBP	7.76	□□□□□ -1.17
SNT309	YPR101W	YKR075C	P36155	307 aa		7.75	□□□□□ -1.17
SNT309	YPR101W	ADE17	P38009	592 aa	Known RBP	7.75	□□□□□ -1.17
SNT309	YPR101W	GLO3	P38682	493 aa	Known RBP	7.75	□□□□□ -1.17
SNT309	YPR101W	IOC3	P43596	787 aa		7.75	□□□□□ -1.17
SNT309	YPR101W	FOX2	Q02207	900 aa	Known RBP	7.75	□□□□□ -1.17
SNT309	YPR101W	GFD1	Q04839	188 aa	Known RBP	7.75	□□□□□ -1.17
SNT309	YPR101W	DCS2	Q12123	353 aa		7.75	□□□□□ -1.17
SNT309	YPR101W	MCM3	P24279	971 aa	Known RBP	7.74	□□□□□ -1.17
SNT309	YPR101W	CDC15	P27636	974 aa		7.74	□□□□□ -1.17
SNT309	YPR101W	SPT23	P35210	1082 aa		7.74	□□□□□ -1.17
SNT309	YPR101W	AKR1	P39010	764 aa		7.74	□□□□□ -1.17
SNT309	YPR101W	RAD26	P40352	1085 aa		7.74	□□□□□ -1.17
SNT309	YPR101W	OSW7	P43611	510 aa		7.74	□□□□□ -1.17
SNT309	YPR101W	STR2	P47164	639 aa		7.74	□□□□□ -1.17
SNT309	YPR101W	PRP31	P49704	494 aa	Predicted RBP	7.74	□□□□□ -1.17
SNT309	YPR101W	ALF1	P53904	254 aa		7.74	□□□□□ -1.17
SNT309	YPR101W	PPM2	Q08282	695 aa		7.74	□□□□□ -1.17
SNT309	YPR101W	TMA16	Q08687	178 aa		7.74	□□□□□ -1.17
SNT309	YPR101W	GET3	Q12154	354 aa	Known RBP	7.74	□□□□□ -1.17
SNT309	YPR101W	PET123	P17558	318 aa		7.73	□□□□□ -1.17
SNT309	YPR101W	HCA4	P20448	770 aa	Known RBP	7.73	□□□□□ -1.17
SNT309	YPR101W	SWI4	P25302	1093 aa	Known RBP	7.73	□□□□□ -1.17
SNT309	YPR101W	URA1	P28272	314 aa	Predicted RBP	7.73	□□□□□ -1.17
SNT309	YPR101W	BMH1	P29311	267 aa	Known RBP	7.73	□□□□□ -1.17
SNT309	YPR101W	RRP1	P35178	278 aa	Predicted RBP	7.73	□□□□□ -1.17
SNT309	YPR101W	SAP190	P36123	1033 aa		7.73	□□□□□ -1.17
SNT309	YPR101W	RRP8	P38961	392 aa	Known RBP	7.73	□□□□□ -1.17
SNT309	YPR101W	CAJ1	P39101	391 aa		7.73	□□□□□ -1.17
SNT309	YPR101W	APL4	Q12028	832 aa		7.73	□□□□□ -1.17
SNT309	YPR101W	NYV1	Q12255	253 aa		7.73	□□□□□ -1.17
SNT309	YPR101W	GIN4	Q12263	1142 aa		7.73	□□□□□ -1.17
SNT309	YPR101W	CYB2	P00175	591 aa		7.72	□□□□□ -1.17
SNT309	YPR101W	SSA2	P10592	639 aa	Known RBP	7.72	□□□□□ -1.17
SNT309	YPR101W	DPB3	P27344	201 aa		7.72	□□□□□ -1.17
SNT309	YPR101W	PXL1	P36166	706 aa		7.72	□□□□□ -1.17
SNT309	YPR101W	PCH2	P38126	564 aa		7.72	□□□□□ -1.17
SNT309	YPR101W	NUG1	P40010	520 aa	Known RBP	7.72	□□□□□ -1.17
SNT309	YPR101W	DOT5	P40553	215 aa		7.72	□□□□□ -1.17
SNT309	YPR101W	MID1	P41821	548 aa		7.72	□□□□□ -1.17
SNT309	YPR101W	APT1	P49435	187 aa	Known RBP	7.72	□□□□□ -1.17
SNT309	YPR101W	MAL13	P53338	473 aa		7.72	□□□□□ -1.17
SNT309	YPR101W	CTI6	Q08923	506 aa		7.72	□□□□□ -1.17
SNT309	YPR101W	PDC1	P06169	563 aa	Known RBP	7.71	□□□□□ -1.18
SNT309	YPR101W	CDC6	P09119	513 aa		7.71	□□□□□ -1.18
SNT309	YPR101W	COQ1	P18900	473 aa		7.71	□□□□□ -1.18
SNT309	YPR101W	UBC1	P21734	215 aa	Known RBP	7.71	□□□□□ -1.18
SNT309	YPR101W	SAC6	P32599	642 aa	Known RBP	7.71	□□□□□ -1.18
SNT309	YPR101W	YEL043W	P32618	956 aa		7.71	□□□□□ -1.18
SNT309	YPR101W	MSH4	P40965	878 aa	Predicted RBP	7.71	□□□□□ -1.18
SNT309	YPR101W	UFD2	P54860	961 aa		7.71	□□□□□ -1.18
SNT309	YPR101W	MRS2	Q01926	470 aa		7.71	□□□□□ -1.18
SNT309	YPR101W	GDE1	Q02979	1223 aa		7.71	□□□□□ -1.18
SNT309	YPR101W	UTP13	Q05946	817 aa	Known RBP	7.71	□□□□□ -1.18
SNT309	YPR101W	NGR1	P32831	672 aa	Known RBP	7.7	□□□□□ -1.18
SNT309	YPR101W	VPS38	Q05919	439 aa		7.7	□□□□□ -1.18
SNT309	YPR101W	TFC6	Q06339	672 aa		7.7	□□□□□ -1.18
SNT309	YPR101W	LAM6	Q08001	693 aa		7.7	□□□□□ -1.18
SNT309	YPR101W	MCM16	Q12262	181 aa		7.7	□□□□□ -1.18
SNT309	YPR101W	SEC23	P15303	768 aa	Known RBP	7.69	□□□□□ -1.18
SNT309	YPR101W	SPB4	P25808	606 aa	Predicted RBP	7.69	□□□□□ -1.18
SNT309	YPR101W	GRX7	P38068	203 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	NDC80	P40460	691 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	MVP1	P40959	511 aa	Known RBP	7.69	□□□□□ -1.18
SNT309	YPR101W	ALD2	P47771	506 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	CAF130	P53280	1122 aa	Predicted RBP	7.69	□□□□□ -1.18
SNT309	YPR101W	APP1	P53933	587 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	RPS15	Q01855	142 aa	Known RBP	7.69	□□□□□ -1.18
SNT309	YPR101W	RNT1	Q02555	471 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	RAT1	Q02792	1006 aa	Known RBP	7.69	□□□□□ -1.18
SNT309	YPR101W	RBA50	Q04418	439 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	MMR1	Q06324	491 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	CSC1	Q06538	782 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	AFT2	Q08957	416 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	CEX1	Q12453	761 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	NBL1	Q3E7Y6	73 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	YKL068W-A	Q3E826	78 aa		7.69	□□□□□ -1.18
SNT309	YPR101W	FIG2	P25653	1609 aa		7.68	□□□□□ -1.18
SNT309	YPR101W	MSH3	P25336	1018 aa		7.68	□□□□□ -1.18
SNT309	YPR101W	MSH1	P25846	959 aa		7.68	□□□□□ -1.18
SNT309	YPR101W	DEP1	P31385	405 aa		7.68	□□□□□ -1.18
SNT309	YPR101W	MAL31	P38156	614 aa		7.68	□□□□□ -1.18
SNT309	YPR101W	RXT2	P38255	430 aa		7.68	□□□□□ -1.18
SNT309	YPR101W	EFM2	P38347	419 aa		7.68	□□□□□ -1.18
SNT309	YPR101W	NAF1	P53919	492 aa	Known RBP	7.68	□□□□□ -1.18
SNT309	YPR101W	PEX29	Q03370	554 aa		7.68	□□□□□ -1.18
SNT309	YPR101W	THI3	Q07471	609 aa		7.68	□□□□□ -1.18
SNT309	YPR101W	DPH6	Q12429	685 aa		7.68	□□□□□ -1.18
SNT309	YPR101W	CHO2	P05374	869 aa	Known RBP	7.67	□□□□□ -1.18
SNT309	YPR101W	VPS1	P21576	704 aa	Known RBP	7.67	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms