RNA–Protein interactions for RNA: YPR052C

NHP6A, Transcript of High-mobility group (HMG) protein, yeast

Gene NHP6A, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP6A	YPR052C	SEC18	P18759	758 aa	Known RBP	5.68	□□□□□ -1.5
NHP6A	YPR052C	GLO3	P38682	493 aa	Known RBP	5.68	□□□□□ -1.5
NHP6A	YPR052C	TOM71	P38825	639 aa	Known RBP	5.68	□□□□□ -1.5
NHP6A	YPR052C	YIR042C	P40586	236 aa		5.68	□□□□□ -1.5
NHP6A	YPR052C	RNR2	P09938	399 aa	Known RBP	5.67	□□□□□ -1.5
NHP6A	YPR052C	HEM1	P09950	548 aa	Predicted RBP	5.67	□□□□□ -1.5
NHP6A	YPR052C	SPB4	P25808	606 aa	Predicted RBP	5.67	□□□□□ -1.5
NHP6A	YPR052C	KTR1	P27810	393 aa	Known RBP	5.67	□□□□□ -1.5
NHP6A	YPR052C	MSP1	P28737	362 aa		5.67	□□□□□ -1.5
NHP6A	YPR052C	KSP1	P38691	1029 aa	Known RBP	5.67	□□□□□ -1.5
NHP6A	YPR052C	EPS1	P40557	701 aa		5.67	□□□□□ -1.5
NHP6A	YPR052C	NPA3	P47122	385 aa		5.67	□□□□□ -1.5
NHP6A	YPR052C	YNR014W	P53719	212 aa		5.67	□□□□□ -1.5
NHP6A	YPR052C	BRE5	P53741	515 aa	Known RBP	5.67	□□□□□ -1.5
NHP6A	YPR052C	YNL193W	P53870	558 aa		5.67	□□□□□ -1.5
NHP6A	YPR052C	RPN7	Q06103	429 aa	Known RBP	5.67	□□□□□ -1.5
NHP6A	YPR052C	UBX5	Q06682	500 aa		5.67	□□□□□ -1.5
NHP6A	YPR052C	TFC8	Q12308	588 aa		5.67	□□□□□ -1.5
NHP6A	YPR052C	LEO1	P38439	464 aa		5.66	□□□□□ -1.5
NHP6A	YPR052C	AIM9	P40053	627 aa	Known RBP	5.66	□□□□□ -1.5
NHP6A	YPR052C	MCM6	P53091	1017 aa	Known RBP	5.66	□□□□□ -1.5
NHP6A	YPR052C	VPS20	Q04272	221 aa		5.66	□□□□□ -1.5
NHP6A	YPR052C	DUR1,2	P32528	1835 aa	Known RBP	5.65	□□□□□ -1.5
NHP6A	YPR052C	IRE1	P32361	1115 aa		5.65	□□□□□ -1.5
NHP6A	YPR052C	NPL4	P33755	580 aa		5.65	□□□□□ -1.5
NHP6A	YPR052C	VPS53	P47061	822 aa		5.65	□□□□□ -1.5
NHP6A	YPR052C	KEL3	Q08979	651 aa	Predicted RBP	5.65	□□□□□ -1.5
NHP6A	YPR052C	LAP2	Q10740	671 aa		5.65	□□□□□ -1.5
NHP6A	YPR052C	TIM23	P32897	222 aa		5.64	□□□□□ -1.51
NHP6A	YPR052C	GPT2	P36148	743 aa		5.64	□□□□□ -1.51
NHP6A	YPR052C	PBY1	P38254	753 aa		5.64	□□□□□ -1.51
NHP6A	YPR052C	STM1	P39015	273 aa	Known RBP	5.64	□□□□□ -1.51
NHP6A	YPR052C	TIF4631	P39935	952 aa	Known RBP	5.64	□□□□□ -1.51
NHP6A	YPR052C	KRI1	P42846	591 aa	Known RBP	5.64	□□□□□ -1.51
NHP6A	YPR052C	YGR125W	P53273	1036 aa		5.64	□□□□□ -1.51
NHP6A	YPR052C	YML037C	Q03703	340 aa		5.64	□□□□□ -1.51
NHP6A	YPR052C	LDB19	Q12502	818 aa		5.64	□□□□□ -1.51
NHP6A	YPR052C	HAA1	Q12753	694 aa	Known RBP	5.64	□□□□□ -1.51
NHP6A	YPR052C	PRE8	P23639	250 aa		5.63	□□□□□ -1.51
NHP6A	YPR052C	SRP40	P32583	406 aa	Predicted RBP	5.63	□□□□□ -1.51
NHP6A	YPR052C	GRS1	P38088	690 aa	Known RBP	5.63	□□□□□ -1.51
NHP6A	YPR052C	OSH3	P38713	996 aa	Known RBP	5.63	□□□□□ -1.51
NHP6A	YPR052C	HAL5	P38970	855 aa	Known RBP	5.63	□□□□□ -1.51
NHP6A	YPR052C	BDH2	P39713	417 aa		5.63	□□□□□ -1.51
NHP6A	YPR052C	AFG3	P39925	761 aa		5.63	□□□□□ -1.51
NHP6A	YPR052C	SLN1	P39928	1220 aa	Predicted RBP	5.63	□□□□□ -1.51
NHP6A	YPR052C	PTK2	P47116	818 aa	Known RBP	5.63	□□□□□ -1.51
NHP6A	YPR052C	ENP2	P48234	707 aa	Known RBP	5.63	□□□□□ -1.51
NHP6A	YPR052C	SOL4	P53315	255 aa		5.63	□□□□□ -1.51
NHP6A	YPR052C	HAP5	Q02516	242 aa		5.63	□□□□□ -1.51
NHP6A	YPR052C	BIK1	P11709	440 aa		5.62	□□□□□ -1.51
NHP6A	YPR052C	MIP1	P15801	1254 aa		5.62	□□□□□ -1.51
NHP6A	YPR052C	SRM1	P21827	482 aa		5.62	□□□□□ -1.51
NHP6A	YPR052C	OPI1	P21957	404 aa		5.62	□□□□□ -1.51
NHP6A	YPR052C	ARL1	P38116	183 aa	Known RBP	5.62	□□□□□ -1.51
NHP6A	YPR052C	PES4	P39684	611 aa		5.62	□□□□□ -1.51
NHP6A	YPR052C	NOC2	P39744	710 aa	Known RBP	5.62	□□□□□ -1.51
NHP6A	YPR052C	SPO22	P40511	975 aa		5.62	□□□□□ -1.51
NHP6A	YPR052C	RSC8	P43609	557 aa	Known RBP	5.62	□□□□□ -1.51
NHP6A	YPR052C	BBC1	P47068	1157 aa		5.62	□□□□□ -1.51
NHP6A	YPR052C	PKH3	Q03306	898 aa	Predicted RBP	5.62	□□□□□ -1.51
NHP6A	YPR052C	HRQ1	Q05549	1077 aa		5.62	□□□□□ -1.51
NHP6A	YPR052C	YPL260W	Q08977	551 aa		5.62	□□□□□ -1.51
NHP6A	YPR052C	PGA3	Q12746	312 aa	Known RBP	5.62	□□□□□ -1.51
NHP6A	YPR052C	DBP1	P24784	617 aa	Known RBP	5.61	□□□□□ -1.51
NHP6A	YPR052C	CIC1	P38779	376 aa	Known RBP	5.61	□□□□□ -1.51
NHP6A	YPR052C	LAM4	P38800	1345 aa		5.61	□□□□□ -1.51
NHP6A	YPR052C	YHR131C	P38835	850 aa		5.61	□□□□□ -1.51
NHP6A	YPR052C	JHD1	P40034	492 aa		5.61	□□□□□ -1.51
NHP6A	YPR052C	YMR147W	P40218	223 aa	Known RBP	5.61	□□□□□ -1.51
NHP6A	YPR052C	YGL081W	P53156	320 aa		5.61	□□□□□ -1.51
NHP6A	YPR052C	HST1	P53685	503 aa		5.61	□□□□□ -1.51
NHP6A	YPR052C	ALD6	P54115	500 aa	Known RBP	5.61	□□□□□ -1.51
NHP6A	YPR052C	DUS4	Q06063	367 aa		5.61	□□□□□ -1.51
NHP6A	YPR052C	TSR3	Q12094	313 aa	Known RBP	5.61	□□□□□ -1.51
NHP6A	YPR052C	RPL19A	P0CX82	189 aa	Known RBP	5.6	□□□□□ -1.51
NHP6A	YPR052C	RPL19B	P0CX83	189 aa	Predicted RBP	5.6	□□□□□ -1.51
NHP6A	YPR052C	TPM1	P17536	199 aa	Known RBP	5.6	□□□□□ -1.51
NHP6A	YPR052C	KNS1	P32350	737 aa	Predicted RBP	5.6	□□□□□ -1.51
NHP6A	YPR052C	KTR2	P33550	425 aa		5.6	□□□□□ -1.51
NHP6A	YPR052C	CIR1	P42940	261 aa		5.6	□□□□□ -1.51
NHP6A	YPR052C	NSG2	P53898	299 aa		5.6	□□□□□ -1.51
NHP6A	YPR052C	BUL2	Q03758	920 aa	Known RBP	5.6	□□□□□ -1.51
NHP6A	YPR052C	MSC6	Q08818	692 aa	Known RBP	5.6	□□□□□ -1.51
NHP6A	YPR052C	RTP1	Q12751	981 aa		5.6	□□□□□ -1.51
NHP6A	YPR052C	PDC1	P06169	563 aa	Known RBP	5.59	□□□□□ -1.51
NHP6A	YPR052C	HIP1	P06775	603 aa		5.59	□□□□□ -1.51
NHP6A	YPR052C	SNA3	P14359	133 aa		5.59	□□□□□ -1.51
NHP6A	YPR052C	KRS1	P15180	591 aa	Known RBP	5.59	□□□□□ -1.51
NHP6A	YPR052C	BCS1	P32839	456 aa		5.59	□□□□□ -1.51
NHP6A	YPR052C	VID28	P40547	921 aa		5.59	□□□□□ -1.51
NHP6A	YPR052C	HYR1	P40581	163 aa	Known RBP	5.59	□□□□□ -1.51
NHP6A	YPR052C	SKP2	P42843	763 aa		5.59	□□□□□ -1.51
NHP6A	YPR052C	IOC3	P43596	787 aa		5.59	□□□□□ -1.51
NHP6A	YPR052C	CTF18	P49956	741 aa		5.59	□□□□□ -1.51
NHP6A	YPR052C	FOL2	P51601	243 aa	Known RBP	5.59	□□□□□ -1.51
NHP6A	YPR052C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
NHP6A	YPR052C	COG8	Q04632	607 aa		5.59	□□□□□ -1.51
NHP6A	YPR052C	KAR5	Q04746	504 aa		5.59	□□□□□ -1.51
NHP6A	YPR052C	PEP3	P27801	918 aa		5.58	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms