RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C TRM732Q03496 1420 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-DR4O74302 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-HP0C2I4 478 aaKnown RBP6.39□□□□□ -1.39
NUP1YOR098C TY1A-AP0CX57 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-PR1P0CX58 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-ORP0CX59 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-PR2P0CX60 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-DR5P0CX65 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-ER2P0CX66 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-GR3P0CX67 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-LR1P0CX68 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-MR2P0CX69 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-JR2P47099 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-DR1Q03856 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-ML1Q04706 440 aaKnown RBP6.39□□□□□ -1.39
NUP1YOR098C ATG20Q07528 640 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-BRQ12217 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-NL2Q12470 440 aa6.39□□□□□ -1.39
NUP1YOR098C TY1A-GR2Q12485 440 aa6.39□□□□□ -1.39
NUP1YOR098C TAF13P11747 167 aa6.38□□□□□ -1.39
NUP1YOR098C PUF4P25339 888 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
NUP1YOR098C MRS6P32864 603 aaKnown RBP6.38□□□□□ -1.39
NUP1YOR098C MET14Q02196 202 aa6.38□□□□□ -1.39
NUP1YOR098C ISU2Q12056 156 aa6.38□□□□□ -1.39
NUP1YOR098C INH1P01097 85 aa6.38□□□□□ -1.39
NUP1YOR098C SSH4P32343 579 aa6.38□□□□□ -1.39
NUP1YOR098C ABD1P32783 436 aaPredicted RBP6.38□□□□□ -1.39
NUP1YOR098C IRR1P40541 1150 aa6.38□□□□□ -1.39
NUP1YOR098C HXT8P40886 569 aa6.38□□□□□ -1.39
NUP1YOR098C MID1P41821 548 aa6.38□□□□□ -1.39
NUP1YOR098C SBP1P10080 294 aaKnown RBP6.38□□□□□ -1.39
NUP1YOR098C SEC2P17065 759 aa6.38□□□□□ -1.39
NUP1YOR098C MEF1P25039 761 aa6.38□□□□□ -1.39
NUP1YOR098C TFC4P33339 1025 aa6.38□□□□□ -1.39
NUP1YOR098C NPL4P33755 580 aa6.38□□□□□ -1.39
NUP1YOR098C SEA4P38164 1038 aa6.38□□□□□ -1.39
NUP1YOR098C PAC1P39946 494 aaKnown RBP6.38□□□□□ -1.39
NUP1YOR098C HUL4P40985 892 aa6.38□□□□□ -1.39
NUP1YOR098C EMW1P42842 904 aaKnown RBP6.38□□□□□ -1.39
NUP1YOR098C HSC82P15108 705 aaKnown RBP6.37□□□□□ -1.39
NUP1YOR098C AGP1P25376 633 aa6.37□□□□□ -1.39
NUP1YOR098C VBA5P36172 582 aa6.37□□□□□ -1.39
NUP1YOR098C GTT3P39996 337 aa6.37□□□□□ -1.39
NUP1YOR098C ULP1Q02724 621 aa6.37□□□□□ -1.39
NUP1YOR098C ADI1Q03677 179 aa6.37□□□□□ -1.39
NUP1YOR098C TY4B-PA0A0B7P3V8 1104 aa6.37□□□□□ -1.39
NUP1YOR098C GAL1P04385 528 aa6.37□□□□□ -1.39
NUP1YOR098C TRZ1P36159 838 aaPredicted RBP6.37□□□□□ -1.39
NUP1YOR098C FAF1P40546 346 aaPredicted RBP6.37□□□□□ -1.39
NUP1YOR098C MRL1Q06815 381 aa6.37□□□□□ -1.39
NUP1YOR098C YLR001CQ07895 862 aa6.37□□□□□ -1.39
NUP1YOR098C TY4A-HQ6Q5P6 413 aa6.37□□□□□ -1.39
NUP1YOR098C SWI3P32591 825 aa6.36□□□□□ -1.39
NUP1YOR098C HSE1P38753 452 aa6.36□□□□□ -1.39
NUP1YOR098C GDH3P39708 457 aa6.36□□□□□ -1.39
NUP1YOR098C SHE9Q04172 456 aa6.36□□□□□ -1.39
NUP1YOR098C APA1P16550 321 aaKnown RBP6.36□□□□□ -1.39
NUP1YOR098C MRP8P35719 219 aa6.36□□□□□ -1.39
NUP1YOR098C MKK2P32491 506 aa6.35□□□□□ -1.39
NUP1YOR098C RAD55P38953 406 aa6.35□□□□□ -1.39
NUP1YOR098C NDE1P40215 560 aa6.35□□□□□ -1.39
NUP1YOR098C GNP1P48813 663 aa6.35□□□□□ -1.39
NUP1YOR098C UTP8P53276 713 aaKnown RBP6.35□□□□□ -1.39
NUP1YOR098C RTP1Q12751 981 aa6.35□□□□□ -1.39
NUP1YOR098C YOL087CQ99247 1116 aa6.35□□□□□ -1.39
NUP1YOR098C TAF2P23255 1407 aa6.35□□□□□ -1.39
NUP1YOR098C FLP1P03870 423 aa6.35□□□□□ -1.39
NUP1YOR098C TFC3P34111 1160 aa6.35□□□□□ -1.39
NUP1YOR098C PTC4P38089 393 aa6.35□□□□□ -1.39
NUP1YOR098C GEM1P39722 662 aa6.35□□□□□ -1.39
NUP1YOR098C SDA1P53313 767 aaKnown RBP6.35□□□□□ -1.39
NUP1YOR098C VMA3P25515 160 aa6.35□□□□□ -1.39
NUP1YOR098C TIF4632P39936 914 aaKnown RBP6.35□□□□□ -1.39
NUP1YOR098C KRE33P53914 1056 aaKnown RBP6.35□□□□□ -1.39
NUP1YOR098C GFD2P25370 566 aaKnown RBP6.34□□□□□ -1.39
NUP1YOR098C JNM1P36224 373 aa6.34□□□□□ -1.39
NUP1YOR098C UBA2P52488 636 aa6.34□□□□□ -1.39
NUP1YOR098C TRE2Q08693 809 aa6.34□□□□□ -1.39
NUP1YOR098C TMA46Q12000 345 aaKnown RBP6.34□□□□□ -1.39
NUP1YOR098C KAR2P16474 682 aaKnown RBP6.34□□□□□ -1.39
NUP1YOR098C GCD11P32481 527 aaKnown RBP6.34□□□□□ -1.39
NUP1YOR098C SEC26P41810 973 aaKnown RBP6.34□□□□□ -1.39
NUP1YOR098C XKS1P42826 600 aa6.34□□□□□ -1.39
NUP1YOR098C RGD2P43556 714 aa6.34□□□□□ -1.39
NUP1YOR098C TIF6Q12522 245 aaKnown RBP6.34□□□□□ -1.39
NUP1YOR098C TRP2P00899 507 aaKnown RBP6.33□□□□□ -1.4
NUP1YOR098C HSP78P33416 811 aa6.33□□□□□ -1.4
NUP1YOR098C TYS1P36421 394 aaKnown RBP6.33□□□□□ -1.4
NUP1YOR098C BAP2P38084 609 aa6.33□□□□□ -1.4
NUP1YOR098C TGL3P40308 642 aa6.33□□□□□ -1.4
NUP1YOR098C ELP4Q02884 456 aaKnown RBP6.33□□□□□ -1.4
NUP1YOR098C YML131WQ03102 365 aa6.33□□□□□ -1.4
NUP1YOR098C REV3P14284 1504 aa6.33□□□□□ -1.4
NUP1YOR098C SBA1P28707 216 aaKnown RBP6.33□□□□□ -1.4
NUP1YOR098C APL2P36000 726 aaPredicted RBP6.33□□□□□ -1.4
NUP1YOR098C ALR2P43553 858 aa6.33□□□□□ -1.4
NUP1YOR098C NMA111P53920 997 aa6.33□□□□□ -1.4
NUP1YOR098C GIC2Q06648 383 aa6.33□□□□□ -1.4
NUP1YOR098C VPS5Q92331 675 aa6.33□□□□□ -1.4
NUP1YOR098C IKI3Q06706 1349 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms