RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C BRF1P29056 596 aa4.52□□□□□ -1.69
VHS3YOR054C GCD6P32501 712 aaKnown RBP4.52□□□□□ -1.69
VHS3YOR054C KAR9P32526 644 aa4.52□□□□□ -1.69
VHS3YOR054C PRX1P34227 261 aaKnown RBP4.52□□□□□ -1.69
VHS3YOR054C KIC1P38692 1080 aa4.52□□□□□ -1.69
VHS3YOR054C BEM4P39011 633 aa4.52□□□□□ -1.69
VHS3YOR054C CSN12P47130 423 aa4.52□□□□□ -1.69
VHS3YOR054C ILM1P47155 203 aa4.52□□□□□ -1.69
VHS3YOR054C APT1P49435 187 aaKnown RBP4.52□□□□□ -1.69
VHS3YOR054C HUL5P53119 910 aa4.52□□□□□ -1.69
VHS3YOR054C IST1P53843 298 aaPredicted RBP4.52□□□□□ -1.69
VHS3YOR054C KRE28Q04431 385 aa4.52□□□□□ -1.69
VHS3YOR054C EIS1Q05050 843 aaKnown RBP4.52□□□□□ -1.69
VHS3YOR054C APL4Q12028 832 aa4.52□□□□□ -1.69
VHS3YOR054C GAL11P19659 1081 aa4.51□□□□□ -1.69
VHS3YOR054C PRP5P21372 849 aaPredicted RBP4.51□□□□□ -1.69
VHS3YOR054C CLB4P24871 460 aa4.51□□□□□ -1.69
VHS3YOR054C DPB3P27344 201 aa4.51□□□□□ -1.69
VHS3YOR054C PRP40P33203 583 aaKnown RBP4.51□□□□□ -1.69
VHS3YOR054C YKR018CP36114 725 aa4.51□□□□□ -1.69
VHS3YOR054C ISW1P38144 1129 aa4.51□□□□□ -1.69
VHS3YOR054C FYV10P40492 516 aa4.51□□□□□ -1.69
VHS3YOR054C SPO1P53541 631 aa4.51□□□□□ -1.69
VHS3YOR054C BET4Q00618 327 aa4.51□□□□□ -1.69
VHS3YOR054C YDR090CQ03193 310 aa4.51□□□□□ -1.69
VHS3YOR054C DPL1Q05567 589 aa4.51□□□□□ -1.69
VHS3YOR054C RSA3Q05942 220 aaKnown RBP4.51□□□□□ -1.69
VHS3YOR054C VAS1P07806 1104 aaKnown RBP4.51□□□□□ -1.69
VHS3YOR054C SWC3P31376 625 aa4.51□□□□□ -1.69
VHS3YOR054C PDB1P32473 366 aaKnown RBP4.51□□□□□ -1.69
VHS3YOR054C YSW1P38280 609 aa4.51□□□□□ -1.69
VHS3YOR054C YNG2P38806 282 aaKnown RBP4.51□□□□□ -1.69
VHS3YOR054C HUL4P40985 892 aa4.51□□□□□ -1.69
VHS3YOR054C YJL007CP47080 104 aa4.51□□□□□ -1.69
VHS3YOR054C YJR079WP47126 109 aa4.51□□□□□ -1.69
VHS3YOR054C PEX14P53112 341 aa4.51□□□□□ -1.69
VHS3YOR054C WAR1Q03631 944 aa4.51□□□□□ -1.69
VHS3YOR054C ATG23Q06671 453 aa4.51□□□□□ -1.69
VHS3YOR054C IOC2Q12072 812 aa4.51□□□□□ -1.69
VHS3YOR054C DDP1Q99321 188 aaKnown RBP4.51□□□□□ -1.69
VHS3YOR054C SAC3P46674 1301 aa4.51□□□□□ -1.69
VHS3YOR054C GPA1P08539 472 aa4.5□□□□□ -1.69
VHS3YOR054C KAR2P16474 682 aaKnown RBP4.5□□□□□ -1.69
VHS3YOR054C CDC15P27636 974 aa4.5□□□□□ -1.69
VHS3YOR054C BUD14P27637 709 aa4.5□□□□□ -1.69
VHS3YOR054C ECM4P36156 370 aa4.5□□□□□ -1.69
VHS3YOR054C DOT5P40553 215 aa4.5□□□□□ -1.69
VHS3YOR054C SHE4P51534 789 aa4.5□□□□□ -1.69
VHS3YOR054C MAL13P53338 473 aa4.5□□□□□ -1.69
VHS3YOR054C RCM1P53972 490 aa4.5□□□□□ -1.69
VHS3YOR054C SUB1P54000 292 aaKnown RBP4.5□□□□□ -1.69
VHS3YOR054C YKU80Q04437 629 aa4.5□□□□□ -1.69
VHS3YOR054C YCG1Q06680 1035 aa4.5□□□□□ -1.69
VHS3YOR054C LAM6Q08001 693 aa4.5□□□□□ -1.69
VHS3YOR054C ABP140Q08641 628 aaKnown RBP4.5□□□□□ -1.69
VHS3YOR054C RSF2P46974 1380 aa4.5□□□□□ -1.69
VHS3YOR054C JIP3O13555 125 aa4.5□□□□□ -1.69
VHS3YOR054C GCD2P12754 651 aaPredicted RBP4.5□□□□□ -1.69
VHS3YOR054C ARG1P22768 420 aa4.5□□□□□ -1.69
VHS3YOR054C CPS1P27614 576 aa4.5□□□□□ -1.69
VHS3YOR054C TIF3P34167 436 aaKnown RBP4.5□□□□□ -1.69
VHS3YOR054C LHS1P36016 881 aa4.5□□□□□ -1.69
VHS3YOR054C RRM3P38766 723 aa4.5□□□□□ -1.69
VHS3YOR054C BIM1P40013 344 aa4.5□□□□□ -1.69
VHS3YOR054C RIM15P43565 1770 aa4.5□□□□□ -1.69
VHS3YOR054C SUM1P46676 1062 aa4.5□□□□□ -1.69
VHS3YOR054C VPS53P47061 822 aa4.5□□□□□ -1.69
VHS3YOR054C STR2P47164 639 aa4.5□□□□□ -1.69
VHS3YOR054C ATH1P48016 1211 aa4.5□□□□□ -1.69
VHS3YOR054C CAF130P53280 1122 aaPredicted RBP4.5□□□□□ -1.69
VHS3YOR054C ADE12P80210 433 aaKnown RBP4.5□□□□□ -1.69
VHS3YOR054C MFM1Q02783 413 aa4.5□□□□□ -1.69
VHS3YOR054C FAR8Q05040 523 aa4.5□□□□□ -1.69
VHS3YOR054C PSR1Q07800 427 aa4.5□□□□□ -1.69
VHS3YOR054C LSO1Q3E827 93 aa4.5□□□□□ -1.69
VHS3YOR054C SWI6P09959 803 aa4.49□□□□□ -1.69
VHS3YOR054C RRP43P25359 394 aaPredicted RBP4.49□□□□□ -1.69
VHS3YOR054C TFC3P34111 1160 aa4.49□□□□□ -1.69
VHS3YOR054C PIM1P36775 1133 aa4.49□□□□□ -1.69
VHS3YOR054C ERC1P38767 581 aa4.49□□□□□ -1.69
VHS3YOR054C CAJ1P39101 391 aa4.49□□□□□ -1.69
VHS3YOR054C VPS8P39702 1274 aa4.49□□□□□ -1.69
VHS3YOR054C YER130CP39959 443 aa4.49□□□□□ -1.69
VHS3YOR054C TRS85P46944 698 aa4.49□□□□□ -1.69
VHS3YOR054C NCS2P53923 493 aaPredicted RBP4.49□□□□□ -1.69
VHS3YOR054C ASI1P54074 624 aa4.49□□□□□ -1.69
VHS3YOR054C MMR1Q06324 491 aa4.49□□□□□ -1.69
VHS3YOR054C TSR1Q07381 788 aaKnown RBP4.49□□□□□ -1.69
VHS3YOR054C CHS5Q12114 671 aaKnown RBP4.49□□□□□ -1.69
VHS3YOR054C VPS5Q92331 675 aa4.49□□□□□ -1.69
VHS3YOR054C RPO41P13433 1351 aaKnown RBP4.48□□□□□ -1.69
VHS3YOR054C RAD1P06777 1100 aa4.48□□□□□ -1.69
VHS3YOR054C HSC82P15108 705 aaKnown RBP4.48□□□□□ -1.69
VHS3YOR054C CDC48P25694 835 aaKnown RBP4.48□□□□□ -1.69
VHS3YOR054C SRP40P32583 406 aaPredicted RBP4.48□□□□□ -1.69
VHS3YOR054C RAD5P32849 1169 aaPredicted RBP4.48□□□□□ -1.69
VHS3YOR054C NPR2P39923 615 aa4.48□□□□□ -1.69
VHS3YOR054C MRX1P40050 688 aa4.48□□□□□ -1.69
VHS3YOR054C VID28P40547 921 aa4.48□□□□□ -1.69
VHS3YOR054C TFG2P41896 400 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms