RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSN1	YOL116W	DUR3	P33413	735 aa		5.05	□□□□□ -1.6
MSN1	YOL116W	GCV1	P48015	400 aa		5.05	□□□□□ -1.6
MSN1	YOL116W	YAF9	P53930	226 aa		5.05	□□□□□ -1.6
MSN1	YOL116W	YIG1	Q08956	461 aa		5.05	□□□□□ -1.6
MSN1	YOL116W	BUD4	P47136	1447 aa		5.05	□□□□□ -1.6
MSN1	YOL116W	MET4	P32389	672 aa		5.04	□□□□□ -1.6
MSN1	YOL116W	YKL077W	P36081	392 aa		5.04	□□□□□ -1.6
MSN1	YOL116W	IPL1	P38991	367 aa		5.04	□□□□□ -1.6
MSN1	YOL116W	MON1	P53129	644 aa		5.04	□□□□□ -1.6
MSN1	YOL116W	UTP22	P53254	1237 aa	Predicted RBP	5.04	□□□□□ -1.6
MSN1	YOL116W	SEN54	Q02825	467 aa	Predicted RBP	5.04	□□□□□ -1.6
MSN1	YOL116W	KIP3	P53086	805 aa	Known RBP	5.03	□□□□□ -1.6
MSN1	YOL116W	NCE103	P53615	221 aa		5.03	□□□□□ -1.6
MSN1	YOL116W	YOR223W	Q12015	292 aa		5.03	□□□□□ -1.6
MSN1	YOL116W	REC8	Q12188	680 aa		5.03	□□□□□ -1.6
MSN1	YOL116W	ERS1	P17261	260 aa		5.02	□□□□□ -1.61
MSN1	YOL116W	HEM3	P28789	327 aa		5.02	□□□□□ -1.61
MSN1	YOL116W	PGM1	P33401	570 aa	Known RBP	5.02	□□□□□ -1.61
MSN1	YOL116W	ARL1	P38116	183 aa	Known RBP	5.02	□□□□□ -1.61
MSN1	YOL116W	SAF1	P38352	637 aa		5.02	□□□□□ -1.61
MSN1	YOL116W	DAK2	P43550	591 aa		5.02	□□□□□ -1.61
MSN1	YOL116W	MEC3	Q02574	474 aa		5.02	□□□□□ -1.61
MSN1	YOL116W	NOP8	Q08287	484 aa	Predicted RBP	5.02	□□□□□ -1.61
MSN1	YOL116W	WHI5	Q12416	295 aa		5.02	□□□□□ -1.61
MSN1	YOL116W	XRN1	P22147	1528 aa	Known RBP	5.02	□□□□□ -1.61
MSN1	YOL116W	CHS2	P14180	963 aa		5.01	□□□□□ -1.61
MSN1	YOL116W	PRP40	P33203	583 aa	Known RBP	5.01	□□□□□ -1.61
MSN1	YOL116W	KAE1	P36132	386 aa		5.01	□□□□□ -1.61
MSN1	YOL116W	MGE1	P38523	228 aa		5.01	□□□□□ -1.61
MSN1	YOL116W	DAL4	Q04895	635 aa		5.01	□□□□□ -1.61
MSN1	YOL116W	REI1	P38344	393 aa	Predicted RBP	5	□□□□□ -1.61
MSN1	YOL116W	AKR1	P39010	764 aa		5	□□□□□ -1.61
MSN1	YOL116W	GIC2	Q06648	383 aa		5	□□□□□ -1.61
MSN1	YOL116W	MDS3	P53094	1487 aa		5	□□□□□ -1.61
MSN1	YOL116W	TAF2	P23255	1407 aa		4.99	□□□□□ -1.61
MSN1	YOL116W	RPT1	P33299	467 aa	Known RBP	4.99	□□□□□ -1.61
MSN1	YOL116W	SQT1	P35184	431 aa		4.99	□□□□□ -1.61
MSN1	YOL116W	RSM26	P47141	266 aa		4.99	□□□□□ -1.61
MSN1	YOL116W	NOG1	Q02892	647 aa	Known RBP	4.99	□□□□□ -1.61
MSN1	YOL116W	THO2	P53552	1597 aa	Known RBP	4.99	□□□□□ -1.61
MSN1	YOL116W	NAM7	P30771	971 aa	Known RBP	4.98	□□□□□ -1.61
MSN1	YOL116W	ASF1	P32447	279 aa		4.98	□□□□□ -1.61
MSN1	YOL116W	MAC1	P35192	417 aa		4.98	□□□□□ -1.61
MSN1	YOL116W	ATG14	P38270	344 aa		4.98	□□□□□ -1.61
MSN1	YOL116W	POL32	P47110	350 aa		4.98	□□□□□ -1.61
MSN1	YOL116W	DOT1	Q04089	582 aa	Known RBP	4.98	□□□□□ -1.61
MSN1	YOL116W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
MSN1	YOL116W	AVO1	Q08236	1176 aa		4.98	□□□□□ -1.61
MSN1	YOL116W	MSB1	P21339	1137 aa	Known RBP	4.97	□□□□□ -1.61
MSN1	YOL116W	MTR4	P47047	1073 aa	Known RBP	4.97	□□□□□ -1.61
MSN1	YOL116W	ULP1	Q02724	621 aa		4.97	□□□□□ -1.61
MSN1	YOL116W	MED7	Q08278	222 aa		4.97	□□□□□ -1.61
MSN1	YOL116W	YLR122C	Q12312	125 aa		4.97	□□□□□ -1.61
MSN1	YOL116W	NSI1	Q12457	570 aa		4.97	□□□□□ -1.61
MSN1	YOL116W	GPT2	P36148	743 aa		4.96	□□□□□ -1.62
MSN1	YOL116W	EXO5	P38289	585 aa		4.96	□□□□□ -1.62
MSN1	YOL116W	IRC24	P40580	263 aa		4.96	□□□□□ -1.62
MSN1	YOL116W	PEX13	P80667	386 aa		4.96	□□□□□ -1.62
MSN1	YOL116W	ADI1	Q03677	179 aa		4.96	□□□□□ -1.62
MSN1	YOL116W	VMA4	P22203	233 aa	Known RBP	4.95	□□□□□ -1.62
MSN1	YOL116W	MSH3	P25336	1018 aa		4.95	□□□□□ -1.62
MSN1	YOL116W	MMM1	P41800	426 aa		4.95	□□□□□ -1.62
MSN1	YOL116W	MRPS18	P42847	217 aa		4.95	□□□□□ -1.62
MSN1	YOL116W	SPO74	P45819	413 aa		4.95	□□□□□ -1.62
MSN1	YOL116W	ALO1	P54783	526 aa	Known RBP	4.95	□□□□□ -1.62
MSN1	YOL116W	YOR059C	Q08448	450 aa	Known RBP	4.95	□□□□□ -1.62
MSN1	YOL116W	MCD1	Q12158	566 aa		4.95	□□□□□ -1.62
MSN1	YOL116W	SKI3	P17883	1432 aa	Known RBP	4.95	□□□□□ -1.62
MSN1	YOL116W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.94	□□□□□ -1.62
MSN1	YOL116W	TY1A-DR6	P0CX70	440 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	TY1A-ER1	P0CX71	440 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	TY1A-LR2	P0CX72	440 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	TY1A-PL	P0CX73	440 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	TY1A-JR1	P0CX74	440 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	TY1A-LR3	P0CX75	440 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	TY1A-ML2	P0CX76	440 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	NNK1	P36003	928 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	OMA1	P36163	345 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	HSE1	P38753	452 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	YGR122W	P53272	402 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	YGR130C	P53278	816 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	YPL109C	Q02981	657 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	LAP2	Q10740	671 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	ALG6	Q12001	544 aa	Known RBP	4.94	□□□□□ -1.62
MSN1	YOL116W	TY1A-GR1	Q12085	440 aa		4.94	□□□□□ -1.62
MSN1	YOL116W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.94	□□□□□ -1.62
MSN1	YOL116W	TY1A-OL	Q92392	440 aa	Known RBP	4.94	□□□□□ -1.62
MSN1	YOL116W	HXK1	P04806	485 aa	Known RBP	4.93	□□□□□ -1.62
MSN1	YOL116W	PRE9	P23638	258 aa	Known RBP	4.93	□□□□□ -1.62
MSN1	YOL116W	PEX28	P38848	579 aa		4.93	□□□□□ -1.62
MSN1	YOL116W	SLS1	P42900	643 aa		4.93	□□□□□ -1.62
MSN1	YOL116W	CIT3	P43635	486 aa		4.93	□□□□□ -1.62
MSN1	YOL116W	YGR045C	P53229	120 aa		4.93	□□□□□ -1.62
MSN1	YOL116W	CYC7	P00045	113 aa		4.92	□□□□□ -1.62
MSN1	YOL116W	RPS4A	P0CX35	261 aa	Known RBP	4.92	□□□□□ -1.62
MSN1	YOL116W	RPS4B	P0CX36	261 aa	Known RBP	4.92	□□□□□ -1.62
MSN1	YOL116W	UGA4	P32837	571 aa		4.92	□□□□□ -1.62
MSN1	YOL116W	MSH4	P40965	878 aa	Predicted RBP	4.92	□□□□□ -1.62
MSN1	YOL116W	ELA1	P53861	379 aa	Predicted RBP	4.92	□□□□□ -1.62
MSN1	YOL116W	TRP3	P00937	484 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms