RNA–Protein interactions for RNA: YOL071W

SDH5, Transcript of Protein required for flavinylation of Sdh1p, yeast

Gene SDH5, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH5	YOL071W	FPR4	Q06205	392 aa	Predicted RBP	11.34	□□□□□ -0.59
SDH5	YOL071W	ANP1	P32629	500 aa		11.33	□□□□□ -0.6
SDH5	YOL071W	ALD6	P54115	500 aa	Known RBP	11.33	□□□□□ -0.6
SDH5	YOL071W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.33	□□□□□ -0.6	not detected
SDH5	YOL071W	RIT1	P23796	513 aa		11.32	□□□□□ -0.6
SDH5	YOL071W	PRO3	P32263	286 aa	Known RBP	11.32	□□□□□ -0.6
SDH5	YOL071W	CDC19	P00549	500 aa	Known RBP	11.31	□□□□□ -0.6
SDH5	YOL071W	SRS2	P12954	1174 aa		11.31	□□□□□ -0.6
SDH5	YOL071W	SEC20	P28791	383 aa		11.31	□□□□□ -0.6
SDH5	YOL071W	PAH1	P32567	862 aa		11.31	□□□□□ -0.6
SDH5	YOL071W	UBP9	P39967	754 aa		11.31	□□□□□ -0.6
SDH5	YOL071W	FOL1	P53848	824 aa		11.31	□□□□□ -0.6
SDH5	YOL071W	GCR2	Q01722	534 aa		11.31	□□□□□ -0.6
SDH5	YOL071W	VPS30	Q02948	557 aa		11.31	□□□□□ -0.6
SDH5	YOL071W	RAD18	P10862	487 aa		11.3	□□□□□ -0.6
SDH5	YOL071W	MAC1	P35192	417 aa		11.3	□□□□□ -0.6
SDH5	YOL071W	RER2	P35196	286 aa		11.3	□□□□□ -0.6
SDH5	YOL071W	PHO88	P38264	188 aa	Predicted RBP	11.3	□□□□□ -0.6
SDH5	YOL071W	AIM21	P40563	679 aa		11.3	□□□□□ -0.6
SDH5	YOL071W	ALG2	P43636	503 aa		11.3	□□□□□ -0.6
SDH5	YOL071W	RPT6	Q01939	405 aa	Known RBP	11.3	□□□□□ -0.6
SDH5	YOL071W	MYO5	Q04439	1219 aa	Known RBP	11.3	□□□□□ -0.6
SDH5	YOL071W	PIB1	Q06651	286 aa		11.3	□□□□□ -0.6
SDH5	YOL071W	PEP3	P27801	918 aa		11.29	□□□□□ -0.6
SDH5	YOL071W	RGT1	P32862	1170 aa		11.29	□□□□□ -0.6
SDH5	YOL071W	BRN1	P38170	754 aa		11.29	□□□□□ -0.6
SDH5	YOL071W	YGR125W	P53273	1036 aa		11.29	□□□□□ -0.6
SDH5	YOL071W	ULP1	Q02724	621 aa		11.29	□□□□□ -0.6
SDH5	YOL071W	MET7	Q08645	548 aa		11.29	□□□□□ -0.6
SDH5	YOL071W	NUC1	P08466	329 aa		11.28	□□□□□ -0.6
SDH5	YOL071W	SAM2	P19358	384 aa	Known RBP	11.28	□□□□□ -0.6
SDH5	YOL071W	MAK31	P23059	88 aa		11.28	□□□□□ -0.6
SDH5	YOL071W	RPL8B	P29453	256 aa	Known RBP	11.28	□□□□□ -0.6
SDH5	YOL071W	VPS45	P38932	577 aa		11.28	□□□□□ -0.6
SDH5	YOL071W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	11.27	□□□□□ -0.61	not detected
SDH5	YOL071W	SPO22	P40511	975 aa		11.27	□□□□□ -0.61
SDH5	YOL071W	TGL1	P34163	548 aa		11.26	□□□□□ -0.61
SDH5	YOL071W	TOM71	P38825	639 aa	Known RBP	11.26	□□□□□ -0.61
SDH5	YOL071W	LSB1	P53281	241 aa		11.26	□□□□□ -0.61
SDH5	YOL071W	GUD1	Q07729	489 aa		11.26	□□□□□ -0.61
SDH5	YOL071W	VPS62	P53285	467 aa		11.25	□□□□□ -0.61
SDH5	YOL071W	SPH1	Q06160	661 aa		11.25	□□□□□ -0.61
SDH5	YOL071W	EST2	Q06163	884 aa		11.25	□□□□□ -0.61
SDH5	YOL071W	TFC6	Q06339	672 aa		11.25	□□□□□ -0.61
SDH5	YOL071W	CSC1	Q06538	782 aa		11.25	□□□□□ -0.61
SDH5	YOL071W	TIM23	P32897	222 aa		11.24	□□□□□ -0.61
SDH5	YOL071W	ACE2	P21192	770 aa		11.23	□□□□□ -0.61
SDH5	YOL071W	UTR4	P32626	227 aa		11.23	□□□□□ -0.61
SDH5	YOL071W	LDH1	P38139	375 aa		11.23	□□□□□ -0.61
SDH5	YOL071W	VPS29	P38759	282 aa		11.23	□□□□□ -0.61
SDH5	YOL071W	CIC1	P38779	376 aa	Known RBP	11.23	□□□□□ -0.61
SDH5	YOL071W	PRY3	P47033	881 aa		11.23	□□□□□ -0.61
SDH5	YOL071W	HDA1	P53973	706 aa		11.23	□□□□□ -0.61
SDH5	YOL071W	SRP54	P20424	541 aa	Known RBP	11.22	□□□□□ -0.61
SDH5	YOL071W	IMP2'	P32351	346 aa		11.22	□□□□□ -0.61
SDH5	YOL071W	FKS1	P38631	1876 aa	Known RBP	11.22	□□□□□ -0.61
SDH5	YOL071W	TMA64	Q04600	565 aa	Known RBP	11.22	□□□□□ -0.61
SDH5	YOL071W	DUS4	Q06063	367 aa		11.22	□□□□□ -0.61
SDH5	YOL071W	ECM30	Q06673	1274 aa		11.22	□□□□□ -0.61
SDH5	YOL071W	TY1B-A	O13527	1196 aa	Known RBP	11.21	□□□□□ -0.61
SDH5	YOL071W	RNR3	P21672	869 aa	Known RBP	11.21	□□□□□ -0.61
SDH5	YOL071W	SEC8	P32855	1065 aa		11.21	□□□□□ -0.61
SDH5	YOL071W	DLD1	P32891	587 aa		11.21	□□□□□ -0.61
SDH5	YOL071W	SIS2	P36024	562 aa		11.21	□□□□□ -0.61
SDH5	YOL071W	PAM1	P37304	830 aa	Known RBP	11.21	□□□□□ -0.61
SDH5	YOL071W	MAL31	P38156	614 aa		11.21	□□□□□ -0.61
SDH5	YOL071W	HXT17	P53631	564 aa		11.21	□□□□□ -0.61
SDH5	YOL071W	MDM1	Q01846	1127 aa		11.21	□□□□□ -0.61
SDH5	YOL071W	ECM23	Q02710	187 aa		11.21	□□□□□ -0.61
SDH5	YOL071W	UTP4	Q06679	776 aa	Known RBP	11.21	□□□□□ -0.61
SDH5	YOL071W	DSE3	Q08729	430 aa		11.21	□□□□□ -0.61
SDH5	YOL071W	MCR1	P36060	302 aa	Known RBP	11.2	□□□□□ -0.62
SDH5	YOL071W	CSM2	P40465	213 aa		11.2	□□□□□ -0.62
SDH5	YOL071W	FMP30	Q02883	468 aa		11.2	□□□□□ -0.62
SDH5	YOL071W	SUT2	Q12286	268 aa		11.2	□□□□□ -0.62
SDH5	YOL071W	MOT1	P32333	1867 aa		11.19	□□□□□ -0.62
SDH5	YOL071W	SAM1	P10659	382 aa	Known RBP	11.19	□□□□□ -0.62
SDH5	YOL071W	SRP40	P32583	406 aa	Predicted RBP	11.19	□□□□□ -0.62
SDH5	YOL071W	HXT13	P39924	564 aa		11.19	□□□□□ -0.62
SDH5	YOL071W	AIM9	P40053	627 aa	Known RBP	11.19	□□□□□ -0.62
SDH5	YOL071W	ESF1	Q06344	628 aa	Known RBP	11.19	□□□□□ -0.62
SDH5	YOL071W	ISA1	Q07821	250 aa	Predicted RBP	11.19	□□□□□ -0.62
SDH5	YOL071W	MDM20	Q12387	796 aa	Known RBP	11.19	□□□□□ -0.62
SDH5	YOL071W	YOR131C	Q12486	218 aa		11.19	□□□□□ -0.62
SDH5	YOL071W	TPM2	P40414	161 aa		11.18	□□□□□ -0.62
SDH5	YOL071W	YFL040W	P43562	540 aa		11.18	□□□□□ -0.62
SDH5	YOL071W	VPS53	P47061	822 aa		11.18	□□□□□ -0.62
SDH5	YOL071W	VIP1	Q06685	1146 aa	Known RBP	11.18	□□□□□ -0.62
SDH5	YOL071W	MCM4	P30665	933 aa	Known RBP	11.17	□□□□□ -0.62
SDH5	YOL071W	OPY1	P38271	328 aa		11.17	□□□□□ -0.62
SDH5	YOL071W	YJR107W	P47145	328 aa		11.17	□□□□□ -0.62
SDH5	YOL071W	LIF1	P53150	421 aa		11.17	□□□□□ -0.62
SDH5	YOL071W	BUL2	Q03758	920 aa	Known RBP	11.17	□□□□□ -0.62
SDH5	YOL071W	DUS3	Q06053	668 aa	Known RBP	11.17	□□□□□ -0.62
SDH5	YOL071W	RPL8A	P17076	256 aa	Known RBP	11.16	□□□□□ -0.62
SDH5	YOL071W	TKL1	P23254	680 aa	Known RBP	11.16	□□□□□ -0.62
SDH5	YOL071W	KSP1	P38691	1029 aa	Known RBP	11.16	□□□□□ -0.62
SDH5	YOL071W	ISW2	Q08773	1120 aa		11.16	□□□□□ -0.62
SDH5	YOL071W	ERP3	Q12403	225 aa		11.16	□□□□□ -0.62
SDH5	YOL071W	PGA3	Q12746	312 aa	Known RBP	11.16	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms