RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C CEX1Q12453 761 aa9.66□□□□□ -0.86
RPD3YNL330C PDC1P06169 563 aaKnown RBP9.65□□□□□ -0.86
RPD3YNL330C VPS1P21576 704 aaKnown RBP9.65□□□□□ -0.86
RPD3YNL330C RXT2P38255 430 aa9.65□□□□□ -0.86
RPD3YNL330C RTS1P38903 757 aa9.65□□□□□ -0.86
RPD3YNL330C CAJ1P39101 391 aa9.65□□□□□ -0.86
RPD3YNL330C PRP31P49704 494 aaPredicted RBP9.65□□□□□ -0.86
RPD3YNL330C ALF1P53904 254 aa9.65□□□□□ -0.86
RPD3YNL330C MRD1Q06106 887 aaKnown RBP9.65□□□□□ -0.86
RPD3YNL330C APL4Q12028 832 aa9.65□□□□□ -0.86
RPD3YNL330C STE11P23561 717 aa9.64□□□□□ -0.87
RPD3YNL330C MSH3P25336 1018 aa9.64□□□□□ -0.87
RPD3YNL330C MYO3P36006 1272 aa9.64□□□□□ -0.87
RPD3YNL330C PCH2P38126 564 aa9.64□□□□□ -0.87
RPD3YNL330C MSH4P40965 878 aaPredicted RBP9.64□□□□□ -0.87
RPD3YNL330C ALD2P47771 506 aa9.64□□□□□ -0.87
RPD3YNL330C APT1P49435 187 aaKnown RBP9.64□□□□□ -0.87
RPD3YNL330C UTP22P53254 1237 aaPredicted RBP9.64□□□□□ -0.87
RPD3YNL330C RTC4P53850 401 aa9.64□□□□□ -0.87
RPD3YNL330C MMR1Q06324 491 aa9.64□□□□□ -0.87
RPD3YNL330C RNR3P21672 869 aaKnown RBP9.63□□□□□ -0.87
RPD3YNL330C MAK31P23059 88 aa9.63□□□□□ -0.87
RPD3YNL330C PTK2P47116 818 aaKnown RBP9.63□□□□□ -0.87
RPD3YNL330C NAF1P53919 492 aaKnown RBP9.63□□□□□ -0.87
RPD3YNL330C HDA1P53973 706 aa9.63□□□□□ -0.87
RPD3YNL330C AFT2Q08957 416 aa9.63□□□□□ -0.87
RPD3YNL330C PTK1P36002 662 aaPredicted RBP9.62□□□□□ -0.87
RPD3YNL330C PXL1P36166 706 aa9.62□□□□□ -0.87
RPD3YNL330C PCI8P40512 444 aa9.62□□□□□ -0.87
RPD3YNL330C FYV8P46949 817 aaKnown RBP9.62□□□□□ -0.87
RPD3YNL330C EIS1Q05050 843 aaKnown RBP9.62□□□□□ -0.87
RPD3YNL330C VPS38Q05919 439 aa9.62□□□□□ -0.87
RPD3YNL330C BDF2Q07442 638 aa9.62□□□□□ -0.87
RPD3YNL330C PSF3Q12146 194 aa9.62□□□□□ -0.87
RPD3YNL330C TIP41Q12199 356 aa9.62□□□□□ -0.87
RPD3YNL330C PTC5Q12511 572 aa9.62□□□□□ -0.87
RPD3YNL330C UBC1P21734 215 aaKnown RBP9.61□□□□□ -0.87
RPD3YNL330C RRP1P35178 278 aaPredicted RBP9.61□□□□□ -0.87
RPD3YNL330C NDC80P40460 691 aa9.61□□□□□ -0.87
RPD3YNL330C YOR296WQ08748 1289 aa9.61□□□□□ -0.87
RPD3YNL330C GIN4Q12263 1142 aa9.61□□□□□ -0.87
RPD3YNL330C YOR111WQ99210 232 aa9.61□□□□□ -0.87
RPD3YNL330C CDC37P06101 506 aaKnown RBP9.6□□□□□ -0.87
RPD3YNL330C ALG1P16661 449 aa9.6□□□□□ -0.87
RPD3YNL330C DPB3P27344 201 aa9.6□□□□□ -0.87
RPD3YNL330C YEL043WP32618 956 aa9.6□□□□□ -0.87
RPD3YNL330C EFM2P38347 419 aa9.6□□□□□ -0.87
RPD3YNL330C BCD1P38772 366 aa9.6□□□□□ -0.87
RPD3YNL330C SPL2P38839 148 aa9.6□□□□□ -0.87
RPD3YNL330C NPR2P39923 615 aa9.6□□□□□ -0.87
RPD3YNL330C YFH7P43591 353 aa9.6□□□□□ -0.87
RPD3YNL330C YGR130CP53278 816 aa9.6□□□□□ -0.87
RPD3YNL330C CAF130P53280 1122 aaPredicted RBP9.6□□□□□ -0.87
RPD3YNL330C RBA50Q04418 439 aa9.6□□□□□ -0.87
RPD3YNL330C MCM16Q12262 181 aa9.6□□□□□ -0.87
RPD3YNL330C NOP14Q99207 810 aaKnown RBP9.6□□□□□ -0.87
RPD3YNL330C HIS4P00815 799 aaKnown RBP9.59□□□□□ -0.87
RPD3YNL330C RIT1P23796 513 aa9.59□□□□□ -0.87
RPD3YNL330C RRP43P25359 394 aaPredicted RBP9.59□□□□□ -0.87
RPD3YNL330C OXP1P28273 1286 aa9.59□□□□□ -0.87
RPD3YNL330C HIR1P32479 840 aa9.59□□□□□ -0.87
RPD3YNL330C MDL2P33311 773 aa9.59□□□□□ -0.87
RPD3YNL330C CTM1P38818 585 aa9.59□□□□□ -0.87
RPD3YNL330C RTT107P38850 1070 aa9.59□□□□□ -0.87
RPD3YNL330C RAD26P40352 1085 aa9.59□□□□□ -0.87
RPD3YNL330C SMC3P47037 1230 aa9.59□□□□□ -0.87
RPD3YNL330C PIP2P52960 996 aa9.59□□□□□ -0.87
RPD3YNL330C MAL13P53338 473 aa9.59□□□□□ -0.87
RPD3YNL330C RPT4P53549 437 aaKnown RBP9.59□□□□□ -0.87
RPD3YNL330C IRC4Q03036 179 aa9.59□□□□□ -0.87
RPD3YNL330C MYO5Q04439 1219 aaKnown RBP9.59□□□□□ -0.87
RPD3YNL330C YDR341CQ05506 607 aaKnown RBP9.59□□□□□ -0.87
RPD3YNL330C TOS4Q06266 489 aa9.59□□□□□ -0.87
RPD3YNL330C ATG9Q12142 997 aa9.59□□□□□ -0.87
RPD3YNL330C MET6P05694 767 aaKnown RBP9.58□□□□□ -0.88
RPD3YNL330C LCB1P25045 558 aaKnown RBP9.58□□□□□ -0.88
RPD3YNL330C KRE2P27809 442 aa9.58□□□□□ -0.88
RPD3YNL330C SEC65P29478 273 aa9.58□□□□□ -0.88
RPD3YNL330C FRD1P32614 470 aaKnown RBP9.58□□□□□ -0.88
RPD3YNL330C RPT3P33298 428 aaKnown RBP9.58□□□□□ -0.88
RPD3YNL330C STO1P34160 861 aaKnown RBP9.58□□□□□ -0.88
RPD3YNL330C YET1P35723 206 aa9.58□□□□□ -0.88
RPD3YNL330C YHL050CP38721 697 aa9.58□□□□□ -0.88
RPD3YNL330C SPT8P38915 602 aa9.58□□□□□ -0.88
RPD3YNL330C CSM2P40465 213 aa9.58□□□□□ -0.88
RPD3YNL330C DAK2P43550 591 aa9.58□□□□□ -0.88
RPD3YNL330C YGR237CP50089 785 aa9.58□□□□□ -0.88
RPD3YNL330C UTP13Q05946 817 aaKnown RBP9.58□□□□□ -0.88
RPD3YNL330C RAD61Q99359 647 aa9.58□□□□□ -0.88
RPD3YNL330C SEC23P15303 768 aaKnown RBP9.57□□□□□ -0.88
RPD3YNL330C BDF1P35817 686 aa9.57□□□□□ -0.88
RPD3YNL330C REI1P38344 393 aaPredicted RBP9.57□□□□□ -0.88
RPD3YNL330C YGL138CP53122 345 aa9.57□□□□□ -0.88
RPD3YNL330C SAS4Q04003 481 aa9.57□□□□□ -0.88
RPD3YNL330C UBX2Q04228 584 aa9.57□□□□□ -0.88
RPD3YNL330C SML1Q04964 104 aa9.57□□□□□ -0.88
RPD3YNL330C PSR2Q07949 397 aa9.57□□□□□ -0.88
RPD3YNL330C YPL260WQ08977 551 aa9.57□□□□□ -0.88
RPD3YNL330C HMI1Q12039 706 aa9.57□□□□□ -0.88
RPD3YNL330C YOL098CQ12496 1037 aa9.57□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms