RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W UFD2P54860 961 aa1.94□□□□□ -2.1
SEC21YNL287W DOT1Q04089 582 aaKnown RBP1.94□□□□□ -2.1
SEC21YNL287W ESC8Q08119 714 aa1.94□□□□□ -2.1
SEC21YNL287W FUR4P05316 633 aaKnown RBP1.94□□□□□ -2.1
SEC21YNL287W PRP6P19735 899 aaPredicted RBP1.94□□□□□ -2.1
SEC21YNL287W ARL1P38116 183 aaKnown RBP1.94□□□□□ -2.1
SEC21YNL287W MSH4P40965 878 aaPredicted RBP1.94□□□□□ -2.1
SEC21YNL287W ORC1P54784 914 aaPredicted RBP1.94□□□□□ -2.1
SEC21YNL287W EAR1Q03212 550 aa1.94□□□□□ -2.1
SEC21YNL287W YLL054CQ12244 843 aa1.94□□□□□ -2.1
SEC21YNL287W ATG1P53104 897 aa1.93□□□□□ -2.1
SEC21YNL287W YRB30P53107 440 aaPredicted RBP1.93□□□□□ -2.1
SEC21YNL287W PRP43P53131 767 aaKnown RBP1.93□□□□□ -2.1
SEC21YNL287W RCM1P53972 490 aa1.93□□□□□ -2.1
SEC21YNL287W SUB2Q07478 446 aaKnown RBP1.93□□□□□ -2.1
SEC21YNL287W HDA2Q06629 674 aa1.93□□□□□ -2.1
SEC21YNL287W YVC1Q12324 675 aa1.93□□□□□ -2.1
SEC21YNL287W FLP1P03870 423 aa1.92□□□□□ -2.1
SEC21YNL287W TY1A-LR4P0C2I8 440 aaKnown RBP1.92□□□□□ -2.1
SEC21YNL287W RPS4AP0CX35 261 aaKnown RBP1.92□□□□□ -2.1
SEC21YNL287W RPS4BP0CX36 261 aaKnown RBP1.92□□□□□ -2.1
SEC21YNL287W TY1A-DR6P0CX70 440 aa1.92□□□□□ -2.1
SEC21YNL287W TY1A-ER1P0CX71 440 aa1.92□□□□□ -2.1
SEC21YNL287W TY1A-LR2P0CX72 440 aa1.92□□□□□ -2.1
SEC21YNL287W TY1A-PLP0CX73 440 aa1.92□□□□□ -2.1
SEC21YNL287W TY1A-JR1P0CX74 440 aa1.92□□□□□ -2.1
SEC21YNL287W TY1A-LR3P0CX75 440 aa1.92□□□□□ -2.1
SEC21YNL287W TY1A-ML2P0CX76 440 aa1.92□□□□□ -2.1
SEC21YNL287W GAS1P22146 559 aaKnown RBP1.92□□□□□ -2.1
SEC21YNL287W ACF4P47129 309 aa1.92□□□□□ -2.1
SEC21YNL287W UTP22P53254 1237 aaPredicted RBP1.92□□□□□ -2.1
SEC21YNL287W TY1A-GR1Q12085 440 aa1.92□□□□□ -2.1
SEC21YNL287W TY1A-PR3Q6Q5H1 440 aaKnown RBP1.92□□□□□ -2.1
SEC21YNL287W TY1A-OLQ92392 440 aaKnown RBP1.92□□□□□ -2.1
SEC21YNL287W AIM44Q99299 758 aa1.92□□□□□ -2.1
SEC21YNL287W TRL1P09880 827 aaKnown RBP1.92□□□□□ -2.1
SEC21YNL287W YDL177CQ12257 170 aa1.92□□□□□ -2.1
SEC21YNL287W SMY2P32909 740 aaKnown RBP1.91□□□□□ -2.1
SEC21YNL287W FLR1P38124 548 aa1.91□□□□□ -2.1
SEC21YNL287W YFR016CP43597 1233 aaKnown RBP1.91□□□□□ -2.1
SEC21YNL287W NUT1P53114 1132 aa1.91□□□□□ -2.1
SEC21YNL287W YAF9P53930 226 aa1.91□□□□□ -2.1
SEC21YNL287W CDC55Q00362 526 aa1.91□□□□□ -2.1
SEC21YNL287W TRS120Q04183 1289 aa1.91□□□□□ -2.1
SEC21YNL287W TRE1Q08919 783 aa1.91□□□□□ -2.1
SEC21YNL287W QDR1P40475 563 aa1.91□□□□□ -2.1
SEC21YNL287W YGR045CP53229 120 aa1.91□□□□□ -2.1
SEC21YNL287W YNL011CP53980 444 aa1.91□□□□□ -2.1
SEC21YNL287W YMR074CQ04773 145 aa1.91□□□□□ -2.1
SEC21YNL287W ADP1P25371 1049 aa1.9□□□□□ -2.1
SEC21YNL287W EXO5P38289 585 aa1.9□□□□□ -2.1
SEC21YNL287W REI1P38344 393 aaPredicted RBP1.9□□□□□ -2.1
SEC21YNL287W GIP4P39732 760 aa1.9□□□□□ -2.1
SEC21YNL287W SSY1Q03770 852 aa1.9□□□□□ -2.1
SEC21YNL287W SAM35P14693 329 aa1.9□□□□□ -2.11
SEC21YNL287W NOG1Q02892 647 aaKnown RBP1.9□□□□□ -2.11
SEC21YNL287W BSC2Q05611 235 aa1.9□□□□□ -2.11
SEC21YNL287W PMT7Q06644 662 aa1.9□□□□□ -2.11
SEC21YNL287W GPI13Q07830 1017 aa1.9□□□□□ -2.11
SEC21YNL287W NSI1Q12457 570 aa1.9□□□□□ -2.11
SEC21YNL287W NNK1P36003 928 aa1.9□□□□□ -2.11
SEC21YNL287W GLO3P38682 493 aaKnown RBP1.9□□□□□ -2.11
SEC21YNL287W YKL222CP35995 705 aa1.89□□□□□ -2.11
SEC21YNL287W NEM1P38757 446 aa1.89□□□□□ -2.11
SEC21YNL287W ALG6Q12001 544 aaKnown RBP1.89□□□□□ -2.11
SEC21YNL287W SOD2P00447 233 aa1.89□□□□□ -2.11
SEC21YNL287W NFS1P25374 497 aa1.89□□□□□ -2.11
SEC21YNL287W KRI1P42846 591 aaKnown RBP1.89□□□□□ -2.11
SEC21YNL287W RIM8P53179 542 aa1.89□□□□□ -2.11
SEC21YNL287W PUS7Q08647 676 aaKnown RBP1.89□□□□□ -2.11
SEC21YNL287W SWR1Q05471 1514 aa1.88□□□□□ -2.11
SEC21YNL287W KAR5Q04746 504 aa1.88□□□□□ -2.11
SEC21YNL287W TOP1P04786 769 aa1.88□□□□□ -2.11
SEC21YNL287W PRO1P32264 428 aa1.88□□□□□ -2.11
SEC21YNL287W RVS167P39743 482 aaKnown RBP1.88□□□□□ -2.11
SEC21YNL287W MDJ2P42834 146 aa1.88□□□□□ -2.11
SEC21YNL287W SLS1P42900 643 aa1.88□□□□□ -2.11
SEC21YNL287W SNU71P53207 620 aaKnown RBP1.88□□□□□ -2.11
SEC21YNL287W ELA1P53861 379 aaPredicted RBP1.88□□□□□ -2.11
SEC21YNL287W MRPL22P53881 309 aa1.88□□□□□ -2.11
SEC21YNL287W GIS1Q03833 894 aa1.88□□□□□ -2.11
SEC21YNL287W YDR132CQ03900 495 aa1.88□□□□□ -2.11
SEC21YNL287W RDH54P38086 958 aa1.87□□□□□ -2.11
SEC21YNL287W AIM3P38266 947 aaKnown RBP1.87□□□□□ -2.11
SEC21YNL287W FRT1Q99332 602 aa1.87□□□□□ -2.11
SEC21YNL287W PTC7P38797 343 aa1.87□□□□□ -2.11
SEC21YNL287W UTP5Q04177 643 aaKnown RBP1.87□□□□□ -2.11
SEC21YNL287W INP54Q08227 384 aaKnown RBP1.86□□□□□ -2.11
SEC21YNL287W PRE10P21242 288 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11 RIP-Chip
SEC21YNL287W SRO9P25567 434 aaKnown RBP1.86□□□□□ -2.11
SEC21YNL287W MCM5P29496 775 aaKnown RBP1.86□□□□□ -2.11
SEC21YNL287W CLU1Q03690 1277 aaKnown RBP1.86□□□□□ -2.11
SEC21YNL287W YPL277CQ08989 487 aa1.86□□□□□ -2.11
SEC21YNL287W RLF2Q12495 606 aa1.86□□□□□ -2.11
SEC21YNL287W HEM13P11353 328 aaKnown RBP1.85□□□□□ -2.11
SEC21YNL287W MDL2P33311 773 aa1.85□□□□□ -2.11
SEC21YNL287W ECM2P38241 364 aaKnown RBP1.85□□□□□ -2.11
SEC21YNL287W YAR028WP39548 234 aa1.85□□□□□ -2.11
SEC21YNL287W RSA3Q05942 220 aaKnown RBP1.85□□□□□ -2.11
SEC21YNL287W NUT2Q06213 157 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 129 ms