RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C YHR020WP38708 688 aaKnown RBP4.8□□□□□ -1.64
WHI3YNL197C ACO2P39533 789 aa4.8□□□□□ -1.64
WHI3YNL197C RSM26P47141 266 aa4.8□□□□□ -1.64
WHI3YNL197C BIO5P53744 561 aaKnown RBP4.8□□□□□ -1.64
WHI3YNL197C CDC53Q12018 815 aaKnown RBP4.8□□□□□ -1.64
WHI3YNL197C EXO5P38289 585 aa4.79□□□□□ -1.64
WHI3YNL197C HUL5P53119 910 aa4.79□□□□□ -1.64
WHI3YNL197C CAF120P53836 1060 aa4.79□□□□□ -1.64
WHI3YNL197C KRE33P53914 1056 aaKnown RBP4.79□□□□□ -1.64
WHI3YNL197C REC8Q12188 680 aa4.79□□□□□ -1.64
WHI3YNL197C STE5P32917 917 aa4.78□□□□□ -1.64
WHI3YNL197C YJR124CP47159 448 aa4.78□□□□□ -1.64
WHI3YNL197C YNR065CP53751 1116 aa4.78□□□□□ -1.64
WHI3YNL197C HEH2Q03281 663 aa4.78□□□□□ -1.64
WHI3YNL197C CCP1P00431 361 aa4.78□□□□□ -1.64
WHI3YNL197C RPP1AP05318 106 aaPredicted RBP4.78□□□□□ -1.64
WHI3YNL197C DIT1P21623 536 aa4.78□□□□□ -1.64
WHI3YNL197C SQT1P35184 431 aa4.78□□□□□ -1.64
WHI3YNL197C YJL181WP46987 611 aa4.78□□□□□ -1.64
WHI3YNL197C ALG12P53730 551 aa4.78□□□□□ -1.64
WHI3YNL197C TDA5Q06417 326 aaKnown RBP4.78□□□□□ -1.64
WHI3YNL197C RSC2Q06488 889 aa4.78□□□□□ -1.64
WHI3YNL197C TRP2P00899 507 aaKnown RBP4.77□□□□□ -1.65
WHI3YNL197C TY1A-LR4P0C2I8 440 aaKnown RBP4.77□□□□□ -1.65
WHI3YNL197C TY1A-DR6P0CX70 440 aa4.77□□□□□ -1.65
WHI3YNL197C TY1A-ER1P0CX71 440 aa4.77□□□□□ -1.65
WHI3YNL197C TY1A-LR2P0CX72 440 aa4.77□□□□□ -1.65
WHI3YNL197C TY1A-PLP0CX73 440 aa4.77□□□□□ -1.65
WHI3YNL197C TY1A-JR1P0CX74 440 aa4.77□□□□□ -1.65
WHI3YNL197C TY1A-LR3P0CX75 440 aa4.77□□□□□ -1.65
WHI3YNL197C TY1A-ML2P0CX76 440 aa4.77□□□□□ -1.65
WHI3YNL197C TAF13P11747 167 aa4.77□□□□□ -1.65
WHI3YNL197C RAD4P14736 754 aa4.77□□□□□ -1.65
WHI3YNL197C SEA4P38164 1038 aa4.77□□□□□ -1.65
WHI3YNL197C PRK1P40494 810 aa4.77□□□□□ -1.65
WHI3YNL197C CUZ1P53899 274 aa4.77□□□□□ -1.65
WHI3YNL197C SIW14P53965 281 aa4.77□□□□□ -1.65
WHI3YNL197C PEX13P80667 386 aa4.77□□□□□ -1.65
WHI3YNL197C SOG2Q08817 791 aa4.77□□□□□ -1.65
WHI3YNL197C TMA46Q12000 345 aaKnown RBP4.77□□□□□ -1.65
WHI3YNL197C TY1A-GR1Q12085 440 aa4.77□□□□□ -1.65
WHI3YNL197C FAL1Q12099 399 aaKnown RBP4.77□□□□□ -1.65
WHI3YNL197C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.77□□□□□ -1.65
WHI3YNL197C TY1A-OLQ92392 440 aaKnown RBP4.77□□□□□ -1.65
WHI3YNL197C LSB6P42951 607 aa4.76□□□□□ -1.65
WHI3YNL197C FAR11P53917 953 aa4.76□□□□□ -1.65
WHI3YNL197C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
WHI3YNL197C ESC2Q06340 456 aa4.76□□□□□ -1.65
WHI3YNL197C HTS1P07263 546 aaKnown RBP4.76□□□□□ -1.65
WHI3YNL197C RER2P35196 286 aa4.76□□□□□ -1.65
WHI3YNL197C RRP14P36080 434 aaKnown RBP4.76□□□□□ -1.65
WHI3YNL197C ROG3P43602 733 aa4.76□□□□□ -1.65
WHI3YNL197C TYW3P53177 273 aa4.76□□□□□ -1.65
WHI3YNL197C SCW11P53189 542 aa4.76□□□□□ -1.65
WHI3YNL197C NAN1Q02931 896 aaKnown RBP4.76□□□□□ -1.65
WHI3YNL197C MTC5Q03897 1148 aa4.76□□□□□ -1.65
WHI3YNL197C TY1A-DR2Q03964 440 aaKnown RBP4.76□□□□□ -1.65
WHI3YNL197C TY1A-MR1Q04215 440 aa4.76□□□□□ -1.65
WHI3YNL197C YLR346CQ06139 101 aa4.76□□□□□ -1.65
WHI3YNL197C BAS1P22035 811 aa4.75□□□□□ -1.65
WHI3YNL197C PPG1P32838 368 aa4.75□□□□□ -1.65
WHI3YNL197C YDR461C-AQ2V2P7 80 aa4.75□□□□□ -1.65
WHI3YNL197C VMA4P22203 233 aaKnown RBP4.74□□□□□ -1.65
WHI3YNL197C AGP1P25376 633 aa4.74□□□□□ -1.65
WHI3YNL197C OSW7P43611 510 aa4.74□□□□□ -1.65
WHI3YNL197C LYS5P50113 272 aa4.74□□□□□ -1.65
WHI3YNL197C ROD1Q02805 837 aa4.74□□□□□ -1.65
WHI3YNL197C FPS1P23900 669 aa4.73□□□□□ -1.65
WHI3YNL197C TIM23P32897 222 aa4.73□□□□□ -1.65
WHI3YNL197C PFD1P46988 109 aa4.73□□□□□ -1.65
WHI3YNL197C TIM54P47045 478 aa4.73□□□□□ -1.65
WHI3YNL197C ENT3P47160 408 aa4.73□□□□□ -1.65
WHI3YNL197C HAS1Q03532 505 aaKnown RBP4.73□□□□□ -1.65
WHI3YNL197C YIG1Q08956 461 aa4.73□□□□□ -1.65
WHI3YNL197C TRK2P28584 889 aa4.73□□□□□ -1.65
WHI3YNL197C LYP1P32487 611 aa4.73□□□□□ -1.65
WHI3YNL197C MKK2P32491 506 aa4.73□□□□□ -1.65
WHI3YNL197C ABD1P32783 436 aaPredicted RBP4.73□□□□□ -1.65
WHI3YNL197C YBR184WP38299 523 aa4.73□□□□□ -1.65
WHI3YNL197C NEM1P38757 446 aa4.73□□□□□ -1.65
WHI3YNL197C SHU2P38957 223 aa4.73□□□□□ -1.65
WHI3YNL197C FET4P40988 552 aa4.73□□□□□ -1.65
WHI3YNL197C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
WHI3YNL197C YMR265CQ03508 461 aaKnown RBP4.73□□□□□ -1.65
WHI3YNL197C SHE9Q04172 456 aa4.73□□□□□ -1.65
WHI3YNL197C SYT1Q06836 1226 aa4.73□□□□□ -1.65
WHI3YNL197C YOR131CQ12486 218 aa4.73□□□□□ -1.65
WHI3YNL197C YGR035CP53222 116 aa4.72□□□□□ -1.65
WHI3YNL197C TIF35Q04067 274 aaKnown RBP4.72□□□□□ -1.65
WHI3YNL197C UTP5Q04177 643 aaKnown RBP4.72□□□□□ -1.65
WHI3YNL197C FLC1Q08967 793 aa4.72□□□□□ -1.65
WHI3YNL197C YPL066WQ12194 479 aa4.72□□□□□ -1.65
WHI3YNL197C RAD27P26793 382 aa4.71□□□□□ -1.66
WHI3YNL197C VBA5P36172 582 aa4.71□□□□□ -1.66
WHI3YNL197C NUP82P40368 713 aa4.71□□□□□ -1.66
WHI3YNL197C ADE12P80210 433 aaKnown RBP4.71□□□□□ -1.66
WHI3YNL197C YLR225CQ05948 407 aaKnown RBP4.71□□□□□ -1.66
WHI3YNL197C SBA1P28707 216 aaKnown RBP4.71□□□□□ -1.66
WHI3YNL197C RPL8BP29453 256 aaKnown RBP4.71□□□□□ -1.66
WHI3YNL197C SLS1P42900 643 aa4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms