RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP1	YNL189W	MSH3	P25336	1018 aa		5.05	□□□□□ -1.6
SRP1	YNL189W	PET112	P33893	541 aa		5.05	□□□□□ -1.6
SRP1	YNL189W	EXO5	P38289	585 aa		5.05	□□□□□ -1.6
SRP1	YNL189W	NOG1	Q02892	647 aa	Known RBP	5.05	□□□□□ -1.6
SRP1	YNL189W	RMD1	Q03441	430 aa		5.05	□□□□□ -1.6
SRP1	YNL189W	SVF1	Q05515	481 aa		5.05	□□□□□ -1.6
SRP1	YNL189W	REC8	Q12188	680 aa		5.05	□□□□□ -1.6
SRP1	YNL189W	SQT1	P35184	431 aa		5.05	□□□□□ -1.6
SRP1	YNL189W	XKS1	P42826	600 aa		5.05	□□□□□ -1.6
SRP1	YNL189W	YGL140C	P53120	1219 aa		5.05	□□□□□ -1.6
SRP1	YNL189W	VPS16	Q03308	798 aa		5.05	□□□□□ -1.6
SRP1	YNL189W	TY4B-P	A0A0B7P3V8	1104 aa		5.04	□□□□□ -1.6
SRP1	YNL189W	ALD6	P54115	500 aa	Known RBP	5.04	□□□□□ -1.6
SRP1	YNL189W	TY4A-H	Q6Q5P6	413 aa		5.04	□□□□□ -1.6
SRP1	YNL189W	DUT1	P33317	147 aa		5.03	□□□□□ -1.6
SRP1	YNL189W	POL5	P39985	1022 aa	Known RBP	5.03	□□□□□ -1.6
SRP1	YNL189W	SLS1	P42900	643 aa		5.03	□□□□□ -1.6
SRP1	YNL189W	ERS1	P17261	260 aa		5.02	□□□□□ -1.61
SRP1	YNL189W	MDJ1	P35191	511 aa		5.02	□□□□□ -1.61
SRP1	YNL189W	NEM1	P38757	446 aa		5.02	□□□□□ -1.61
SRP1	YNL189W	MAD1	P40957	749 aa		5.02	□□□□□ -1.61
SRP1	YNL189W	GAS5	Q08193	484 aa		5.02	□□□□□ -1.61
SRP1	YNL189W	PIN2	Q12057	282 aa		5.02	□□□□□ -1.61
SRP1	YNL189W	NHA1	Q99271	985 aa		5.02	□□□□□ -1.61
SRP1	YNL189W	VAC8	P39968	578 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	YFL066C	P43538	392 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	GNP1	P48813	663 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	UTP22	P53254	1237 aa	Predicted RBP	5.01	□□□□□ -1.61
SRP1	YNL189W	SEC23	P15303	768 aa	Known RBP	5.01	□□□□□ -1.61
SRP1	YNL189W	YKL077W	P36081	392 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	RDH54	P38086	958 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	RRM3	P38766	723 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	FAA4	P47912	694 aa	Known RBP	5.01	□□□□□ -1.61
SRP1	YNL189W	YNR014W	P53719	212 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	SPO71	Q03868	1245 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	HDA2	Q06629	674 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	MRL1	Q06815	381 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	THI72	Q08579	599 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	YIG1	Q08956	461 aa		5.01	□□□□□ -1.61
SRP1	YNL189W	AI1	P03875	834 aa		5	□□□□□ -1.61
SRP1	YNL189W	BOI2	P39969	1040 aa		5	□□□□□ -1.61
SRP1	YNL189W	ALG6	Q12001	544 aa	Known RBP	5	□□□□□ -1.61
SRP1	YNL189W	SLP1	Q12232	587 aa		5	□□□□□ -1.61
SRP1	YNL189W	CDC34	P14682	295 aa		4.99	□□□□□ -1.61
SRP1	YNL189W	HXT13	P39924	564 aa		4.99	□□□□□ -1.61
SRP1	YNL189W	LEM3	P42838	414 aa		4.99	□□□□□ -1.61
SRP1	YNL189W	HXT17	P53631	564 aa		4.99	□□□□□ -1.61
SRP1	YNL189W	HXT15	P54854	567 aa		4.99	□□□□□ -1.61
SRP1	YNL189W	ROD1	Q02805	837 aa		4.99	□□□□□ -1.61
SRP1	YNL189W	ELG1	Q12050	791 aa		4.99	□□□□□ -1.61
SRP1	YNL189W	DED1	P06634	604 aa	Known RBP	4.98	□□□□□ -1.61
SRP1	YNL189W	MNR2	P35724	969 aa		4.98	□□□□□ -1.61
SRP1	YNL189W	SHU2	P38957	223 aa		4.98	□□□□□ -1.61
SRP1	YNL189W	CWC24	P53769	259 aa		4.98	□□□□□ -1.61
SRP1	YNL189W	EEB1	Q02891	456 aa		4.98	□□□□□ -1.61
SRP1	YNL189W	GDE1	Q02979	1223 aa		4.98	□□□□□ -1.61
SRP1	YNL189W	UTP5	Q04177	643 aa	Known RBP	4.98	□□□□□ -1.61
SRP1	YNL189W	TDA6	Q06466	467 aa		4.98	□□□□□ -1.61
SRP1	YNL189W	SAC7	P17121	654 aa		4.97	□□□□□ -1.61
SRP1	YNL189W	CLN2	P20438	545 aa		4.97	□□□□□ -1.61
SRP1	YNL189W	SPO74	P45819	413 aa		4.97	□□□□□ -1.61
SRP1	YNL189W	KIP3	P53086	805 aa	Known RBP	4.97	□□□□□ -1.61
SRP1	YNL189W	MEC3	Q02574	474 aa		4.97	□□□□□ -1.61
SRP1	YNL189W	REI1	P38344	393 aa	Predicted RBP	4.97	□□□□□ -1.61
SRP1	YNL189W	ICP55	P40051	511 aa		4.97	□□□□□ -1.61
SRP1	YNL189W	YMR074C	Q04773	145 aa		4.97	□□□□□ -1.61
SRP1	YNL189W	RTT10	Q08924	1013 aa		4.97	□□□□□ -1.61
SRP1	YNL189W	TY1A-NL1	Q12391	440 aa	Known RBP	4.97	□□□□□ -1.61
SRP1	YNL189W	PRI2	P20457	528 aa		4.96	□□□□□ -1.62
SRP1	YNL189W	MAE1	P36013	669 aa	Known RBP	4.96	□□□□□ -1.62
SRP1	YNL189W	PRY1	P47032	299 aa		4.96	□□□□□ -1.62
SRP1	YNL189W	BUD9	P53226	547 aa		4.96	□□□□□ -1.62
SRP1	YNL189W	YNR063W	P53749	607 aa		4.96	□□□□□ -1.62
SRP1	YNL189W	VMA4	P22203	233 aa	Known RBP	4.95	□□□□□ -1.62
SRP1	YNL189W	RER2	P35196	286 aa		4.95	□□□□□ -1.62
SRP1	YNL189W	GCV1	P48015	400 aa		4.95	□□□□□ -1.62
SRP1	YNL189W	YGR053C	P53234	283 aa		4.95	□□□□□ -1.62
SRP1	YNL189W	NSG2	P53898	299 aa		4.95	□□□□□ -1.62
SRP1	YNL189W	RAT1	Q02792	1006 aa	Known RBP	4.95	□□□□□ -1.62
SRP1	YNL189W	EST2	Q06163	884 aa		4.95	□□□□□ -1.62
SRP1	YNL189W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	RIP-Chip
SRP1	YNL189W	YKL069W	P36088	180 aa		4.94	□□□□□ -1.62
SRP1	YNL189W	SLN1	P39928	1220 aa	Predicted RBP	4.94	□□□□□ -1.62
SRP1	YNL189W	MTR4	P47047	1073 aa	Known RBP	4.94	□□□□□ -1.62
SRP1	YNL189W	YGR045C	P53229	120 aa		4.94	□□□□□ -1.62
SRP1	YNL189W	DSE4	P53753	1117 aa		4.94	□□□□□ -1.62
SRP1	YNL189W	SIW14	P53965	281 aa		4.94	□□□□□ -1.62
SRP1	YNL189W	ESC2	Q06340	456 aa		4.94	□□□□□ -1.62
SRP1	YNL189W	YCK2	P23292	546 aa	Known RBP	4.94	□□□□□ -1.62
SRP1	YNL189W	NAP1	P25293	417 aa	Known RBP	4.94	□□□□□ -1.62
SRP1	YNL189W	AFG2	P32794	780 aa		4.94	□□□□□ -1.62
SRP1	YNL189W	MCX1	P38323	520 aa	Predicted RBP	4.94	□□□□□ -1.62
SRP1	YNL189W	FAR11	P53917	953 aa		4.94	□□□□□ -1.62
SRP1	YNL189W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SRP1	YNL189W	PHM7	Q12252	991 aa		4.94	□□□□□ -1.62
SRP1	YNL189W	MKK2	P32491	506 aa		4.93	□□□□□ -1.62
SRP1	YNL189W	ADD66	P36040	267 aa		4.93	□□□□□ -1.62
SRP1	YNL189W	NCE103	P53615	221 aa		4.93	□□□□□ -1.62
SRP1	YNL189W	ELA1	P53861	379 aa	Predicted RBP	4.93	□□□□□ -1.62
SRP1	YNL189W	MTC5	Q03897	1148 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 63.1 ms