RNA–Protein interactions for RNA: YNL119W

NCS2, Transcript of Protein required for uridine thiolation of Lys(UUU) and Glu(UUC) tRNAs, yeast

Gene NCS2, Length 1,482 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCS2	YNL119W	MAE1	P36013	669 aa	Known RBP	4.59	□□□□□ -1.67
NCS2	YNL119W	YKL077W	P36081	392 aa		4.59	□□□□□ -1.67
NCS2	YNL119W	RSM26	P47141	266 aa		4.59	□□□□□ -1.67
NCS2	YNL119W	FAR11	P53917	953 aa		4.59	□□□□□ -1.67
NCS2	YNL119W	MCD1	Q12158	566 aa		4.59	□□□□□ -1.67
NCS2	YNL119W	HTS1	P07263	546 aa	Known RBP	4.58	□□□□□ -1.68
NCS2	YNL119W	NAP1	P25293	417 aa	Known RBP	4.58	□□□□□ -1.68
NCS2	YNL119W	SFA1	P32771	386 aa		4.58	□□□□□ -1.68
NCS2	YNL119W	SEC8	P32855	1065 aa		4.58	□□□□□ -1.68
NCS2	YNL119W	POL5	P39985	1022 aa	Known RBP	4.58	□□□□□ -1.68
NCS2	YNL119W	MRPS18	P42847	217 aa		4.58	□□□□□ -1.68
NCS2	YNL119W	ULP1	Q02724	621 aa		4.58	□□□□□ -1.68
NCS2	YNL119W	RMD1	Q03441	430 aa		4.58	□□□□□ -1.68
NCS2	YNL119W	TY1B-DR4	Q07793	1604 aa		4.58	□□□□□ -1.68
NCS2	YNL119W	HXK1	P04806	485 aa	Known RBP	4.57	□□□□□ -1.68
NCS2	YNL119W	PRY1	P47032	299 aa		4.57	□□□□□ -1.68
NCS2	YNL119W	UTP22	P53254	1237 aa	Predicted RBP	4.57	□□□□□ -1.68
NCS2	YNL119W	OYE2	Q03558	400 aa	Known RBP	4.57	□□□□□ -1.68
NCS2	YNL119W	ADI1	Q03677	179 aa		4.57	□□□□□ -1.68
NCS2	YNL119W	YIG1	Q08956	461 aa		4.57	□□□□□ -1.68
NCS2	YNL119W	ELG1	Q12050	791 aa		4.57	□□□□□ -1.68
NCS2	YNL119W	RAD2	P07276	1031 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	PRE9	P23638	258 aa	Known RBP	4.56	□□□□□ -1.68
NCS2	YNL119W	FAA3	P39002	694 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	RPS26A	P39938	119 aa	Known RBP	4.56	□□□□□ -1.68
NCS2	YNL119W	RPS26B	P39939	119 aa	Known RBP	4.56	□□□□□ -1.68
NCS2	YNL119W	GCV1	P48015	400 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	NOG1	Q02892	647 aa	Known RBP	4.56	□□□□□ -1.68
NCS2	YNL119W	YMR074C	Q04773	145 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	ESF1	Q06344	628 aa	Known RBP	4.56	□□□□□ -1.68
NCS2	YNL119W	GAS5	Q08193	484 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	CYC8	P14922	966 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	RSC6	P25632	483 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	PEP7	P32609	515 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	TAT1	P38085	619 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	ARL1	P38116	183 aa	Known RBP	4.56	□□□□□ -1.68
NCS2	YNL119W	ATG14	P38270	344 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	BUD9	P53226	547 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	PEX13	P80667	386 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	MEC3	Q02574	474 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	YPL034W	Q03083	165 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	SVF1	Q05515	481 aa		4.56	□□□□□ -1.68
NCS2	YNL119W	AI3	P03877	415 aa		4.55	□□□□□ -1.68
NCS2	YNL119W	ALO1	P54783	526 aa	Known RBP	4.55	□□□□□ -1.68
NCS2	YNL119W	YPL109C	Q02981	657 aa		4.55	□□□□□ -1.68
NCS2	YNL119W	TAF13	P11747	167 aa		4.54	□□□□□ -1.68
NCS2	YNL119W	MSH3	P25336	1018 aa		4.54	□□□□□ -1.68
NCS2	YNL119W	UGA4	P32837	571 aa		4.54	□□□□□ -1.68
NCS2	YNL119W	FYV10	P40492	516 aa		4.54	□□□□□ -1.68
NCS2	YNL119W	MTR4	P47047	1073 aa	Known RBP	4.54	□□□□□ -1.68
NCS2	YNL119W	SPR28	Q04921	423 aa		4.54	□□□□□ -1.68
NCS2	YNL119W	YOR223W	Q12015	292 aa		4.54	□□□□□ -1.68
NCS2	YNL119W	TY1A-NL1	Q12391	440 aa	Known RBP	4.54	□□□□□ -1.68
NCS2	YNL119W	VMA4	P22203	233 aa	Known RBP	4.53	□□□□□ -1.68
NCS2	YNL119W	MCM2	P29469	868 aa		4.53	□□□□□ -1.68
NCS2	YNL119W	REI1	P38344	393 aa	Predicted RBP	4.53	□□□□□ -1.68
NCS2	YNL119W	PEX28	P38848	579 aa		4.53	□□□□□ -1.68
NCS2	YNL119W	NOP7	P53261	605 aa	Known RBP	4.53	□□□□□ -1.68
NCS2	YNL119W	TOS4	Q06266	489 aa		4.53	□□□□□ -1.68
NCS2	YNL119W	ERS1	P17261	260 aa		4.52	□□□□□ -1.69
NCS2	YNL119W	EXO5	P38289	585 aa		4.52	□□□□□ -1.69
NCS2	YNL119W	ARI1	P53111	347 aa	Known RBP	4.52	□□□□□ -1.69
NCS2	YNL119W	SPA2	P23201	1466 aa	Known RBP	4.51	□□□□□ -1.69
NCS2	YNL119W	KIP3	P53086	805 aa	Known RBP	4.51	□□□□□ -1.69
NCS2	YNL119W	AVO1	Q08236	1176 aa		4.51	□□□□□ -1.69
NCS2	YNL119W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
NCS2	YNL119W	PET112	P33893	541 aa		4.5	□□□□□ -1.69
NCS2	YNL119W	INP52	P50942	1183 aa		4.5	□□□□□ -1.69
NCS2	YNL119W	LAP2	Q10740	671 aa		4.5	□□□□□ -1.69
NCS2	YNL119W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.49	□□□□□ -1.69
NCS2	YNL119W	TY1A-DR6	P0CX70	440 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	TY1A-ER1	P0CX71	440 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	TY1A-LR2	P0CX72	440 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	TY1A-PL	P0CX73	440 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	TY1A-JR1	P0CX74	440 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	TY1A-LR3	P0CX75	440 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	TY1A-ML2	P0CX76	440 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	SEC23	P15303	768 aa	Known RBP	4.49	□□□□□ -1.69
NCS2	YNL119W	CLN2	P20438	545 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	MNR2	P35724	969 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	OMA1	P36163	345 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	HSE1	P38753	452 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	YGL140C	P53120	1219 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	NCE103	P53615	221 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	DOT1	Q04089	582 aa	Known RBP	4.49	□□□□□ -1.69
NCS2	YNL119W	TY1A-GR1	Q12085	440 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.49	□□□□□ -1.69
NCS2	YNL119W	TY1A-OL	Q92392	440 aa	Known RBP	4.49	□□□□□ -1.69
NCS2	YNL119W	PIC2	P40035	300 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	XKS1	P42826	600 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	ENT3	P47160	408 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	UTP5	Q04177	643 aa	Known RBP	4.49	□□□□□ -1.69
NCS2	YNL119W	REC8	Q12188	680 aa		4.49	□□□□□ -1.69
NCS2	YNL119W	TCB3	Q03640	1545 aa	Known RBP	4.48	□□□□□ -1.69
NCS2	YNL119W	RAD27	P26793	382 aa		4.48	□□□□□ -1.69
NCS2	YNL119W	COQ2	P32378	372 aa		4.48	□□□□□ -1.69
NCS2	YNL119W	PGM1	P33401	570 aa	Known RBP	4.48	□□□□□ -1.69
NCS2	YNL119W	ADD66	P36040	267 aa		4.48	□□□□□ -1.69
NCS2	YNL119W	NEM1	P38757	446 aa		4.48	□□□□□ -1.69
NCS2	YNL119W	MAD1	P40957	749 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms