RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeast

Gene LIP1, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LIP1	YMR298W	EPL1	P43572	832 aa		10.89	□□□□□ -0.67
LIP1	YMR298W	TFC6	Q06339	672 aa		10.89	□□□□□ -0.67
LIP1	YMR298W	GAS5	Q08193	484 aa		10.89	□□□□□ -0.67
LIP1	YMR298W	APC11	Q12157	165 aa		10.89	□□□□□ -0.67
LIP1	YMR298W	RAD61	Q99359	647 aa		10.89	□□□□□ -0.67
LIP1	YMR298W	FLO1	P32768	1537 aa		10.89	□□□□□ -0.67
LIP1	YMR298W	PGI1	P12709	554 aa	Known RBP	10.88	□□□□□ -0.67
LIP1	YMR298W	DIT2	P21595	489 aa		10.88	□□□□□ -0.67
LIP1	YMR298W	MBR1	P23493	339 aa		10.88	□□□□□ -0.67
LIP1	YMR298W	AKR1	P39010	764 aa		10.88	□□□□□ -0.67
LIP1	YMR298W	ALG2	P43636	503 aa		10.88	□□□□□ -0.67
LIP1	YMR298W	PIL1	P53252	339 aa	Known RBP	10.88	□□□□□ -0.67
LIP1	YMR298W	KRE33	P53914	1056 aa	Known RBP	10.88	□□□□□ -0.67
LIP1	YMR298W	BMH2	P34730	273 aa	Known RBP	10.87	□□□□□ -0.67
LIP1	YMR298W	SHC1	P39000	512 aa		10.87	□□□□□ -0.67
LIP1	YMR298W	AIR2	Q12476	344 aa	Known RBP	10.87	□□□□□ -0.67
LIP1	YMR298W	MAK31	P23059	88 aa		10.86	□□□□□ -0.67
LIP1	YMR298W	RPS7A	P26786	190 aa	Known RBP	10.86	□□□□□ -0.67
LIP1	YMR298W	NSG2	P53898	299 aa		10.86	□□□□□ -0.67
LIP1	YMR298W	HDA1	P53973	706 aa		10.86	□□□□□ -0.67
LIP1	YMR298W	HSP82	P02829	709 aa	Known RBP	10.85	□□□□□ -0.67
LIP1	YMR298W	FRS2	P15625	503 aa	Known RBP	10.85	□□□□□ -0.67
LIP1	YMR298W	MAL31	P38156	614 aa		10.85	□□□□□ -0.67
LIP1	YMR298W	RPN10	P38886	268 aa	Known RBP	10.85	□□□□□ -0.67
LIP1	YMR298W	VID27	P40157	782 aa		10.85	□□□□□ -0.67
LIP1	YMR298W	MSH4	P40965	878 aa	Predicted RBP	10.85	□□□□□ -0.67
LIP1	YMR298W	PTK2	P47116	818 aa	Known RBP	10.85	□□□□□ -0.67
LIP1	YMR298W	RSC1	P53236	928 aa		10.85	□□□□□ -0.67
LIP1	YMR298W	FAR11	P53917	953 aa		10.85	□□□□□ -0.67
LIP1	YMR298W	LCD1	Q04377	747 aa		10.85	□□□□□ -0.67
LIP1	YMR298W	DDP1	Q99321	188 aa	Known RBP	10.85	□□□□□ -0.67
LIP1	YMR298W	HCA4	P20448	770 aa	Known RBP	10.84	□□□□□ -0.67
LIP1	YMR298W	MAK11	P20484	414 aa	Known RBP	10.84	□□□□□ -0.67
LIP1	YMR298W	RIT1	P23796	513 aa		10.84	□□□□□ -0.67
LIP1	YMR298W	SWI4	P25302	1093 aa	Known RBP	10.84	□□□□□ -0.67
LIP1	YMR298W	AFG2	P32794	780 aa		10.84	□□□□□ -0.67
LIP1	YMR298W	DID4	P36108	232 aa		10.84	□□□□□ -0.67
LIP1	YMR298W	RKM3	P38222	552 aa		10.84	□□□□□ -0.67
LIP1	YMR298W	KEL3	Q08979	651 aa	Predicted RBP	10.84	□□□□□ -0.67
LIP1	YMR298W	TOP1	P04786	769 aa		10.83	□□□□□ -0.68
LIP1	YMR298W	ASF1	P32447	279 aa		10.83	□□□□□ -0.68
LIP1	YMR298W	RFT1	P38206	574 aa	Predicted RBP	10.83	□□□□□ -0.68
LIP1	YMR298W	MYO5	Q04439	1219 aa	Known RBP	10.83	□□□□□ -0.68
LIP1	YMR298W	CRF1	Q04930	467 aa		10.83	□□□□□ -0.68
LIP1	YMR298W	FLO11	P08640	1367 aa		10.82	□□□□□ -0.68
LIP1	YMR298W	RNR3	P21672	869 aa	Known RBP	10.82	□□□□□ -0.68
LIP1	YMR298W	GDE1	Q02979	1223 aa		10.82	□□□□□ -0.68
LIP1	YMR298W	PCL8	Q08966	492 aa		10.82	□□□□□ -0.68
LIP1	YMR298W	TAF13	P11747	167 aa		10.81	□□□□□ -0.68
LIP1	YMR298W	RXT2	P38255	430 aa		10.81	□□□□□ -0.68
LIP1	YMR298W	VPS8	P39702	1274 aa		10.81	□□□□□ -0.68
LIP1	YMR298W	CSM2	P40465	213 aa		10.81	□□□□□ -0.68
LIP1	YMR298W	RPT6	Q01939	405 aa	Known RBP	10.81	□□□□□ -0.68
LIP1	YMR298W	YPR148C	Q06523	435 aa		10.81	□□□□□ -0.68
LIP1	YMR298W	CLF1	Q12309	687 aa	Predicted RBP	10.81	□□□□□ -0.68
LIP1	YMR298W	YOR111W	Q99210	232 aa		10.81	□□□□□ -0.68
LIP1	YMR298W	MSM1	P22438	575 aa		10.8	□□□□□ -0.68
LIP1	YMR298W	PRO3	P32263	286 aa	Known RBP	10.8	□□□□□ -0.68
LIP1	YMR298W	NPR3	P38742	1146 aa		10.8	□□□□□ -0.68
LIP1	YMR298W	YJL171C	P46992	396 aa		10.8	□□□□□ -0.68
LIP1	YMR298W	HXK1	P04806	485 aa	Known RBP	10.79	□□□□□ -0.68
LIP1	YMR298W	PES4	P39684	611 aa		10.79	□□□□□ -0.68
LIP1	YMR298W	YPT11	P48559	417 aa		10.79	□□□□□ -0.68
LIP1	YMR298W	SEN54	Q02825	467 aa	Predicted RBP	10.79	□□□□□ -0.68
LIP1	YMR298W	DCS2	Q12123	353 aa		10.79	□□□□□ -0.68
LIP1	YMR298W	GET3	Q12154	354 aa	Known RBP	10.79	□□□□□ -0.68
LIP1	YMR298W	CEX1	Q12453	761 aa		10.79	□□□□□ -0.68
LIP1	YMR298W	CDC6	P09119	513 aa		10.78	□□□□□ -0.68
LIP1	YMR298W	PRE8	P23639	250 aa		10.78	□□□□□ -0.68
LIP1	YMR298W	RPL8B	P29453	256 aa	Known RBP	10.78	□□□□□ -0.68
LIP1	YMR298W	RTG1	P32607	177 aa		10.78	□□□□□ -0.68
LIP1	YMR298W	PCI8	P40512	444 aa		10.78	□□□□□ -0.68
LIP1	YMR298W	ATG20	Q07528	640 aa		10.78	□□□□□ -0.68
LIP1	YMR298W	RGP1	P16664	663 aa		10.77	□□□□□ -0.69
LIP1	YMR298W	SRM1	P21827	482 aa		10.77	□□□□□ -0.69
LIP1	YMR298W	YKT6	P36015	200 aa	Known RBP	10.77	□□□□□ -0.69
LIP1	YMR298W	DCW1	P36091	449 aa		10.77	□□□□□ -0.69
LIP1	YMR298W	NAF1	P53919	492 aa	Known RBP	10.77	□□□□□ -0.69
LIP1	YMR298W	YDR341C	Q05506	607 aa	Known RBP	10.77	□□□□□ -0.69
LIP1	YMR298W	TRS33	Q99394	268 aa		10.77	□□□□□ -0.69
LIP1	YMR298W	MET6	P05694	767 aa	Known RBP	10.76	□□□□□ -0.69
LIP1	YMR298W	GPA1	P08539	472 aa		10.76	□□□□□ -0.69
LIP1	YMR298W	VPS1	P21576	704 aa	Known RBP	10.76	□□□□□ -0.69
LIP1	YMR298W	TOM71	P38825	639 aa	Known RBP	10.76	□□□□□ -0.69
LIP1	YMR298W	YER130C	P39959	443 aa		10.76	□□□□□ -0.69
LIP1	YMR298W	SGD1	Q06132	899 aa		10.76	□□□□□ -0.69
LIP1	YMR298W	SKG3	Q06315	1026 aa		10.76	□□□□□ -0.69
LIP1	YMR298W	NBL1	Q3E7Y6	73 aa		10.76	□□□□□ -0.69
LIP1	YMR298W	GSC2	P40989	1895 aa		10.75	□□□□□ -0.69
LIP1	YMR298W	RPL22A	P05749	121 aa	Known RBP	10.75	□□□□□ -0.69
LIP1	YMR298W	MIC60	P36112	540 aa		10.75	□□□□□ -0.69
LIP1	YMR298W	EDS1	P38073	919 aa		10.75	□□□□□ -0.69
LIP1	YMR298W	UTP7	P40055	554 aa	Known RBP	10.75	□□□□□ -0.69
LIP1	YMR298W	MTC3	P53077	123 aa		10.75	□□□□□ -0.69
LIP1	YMR298W	FPK1	P53739	893 aa		10.75	□□□□□ -0.69
LIP1	YMR298W	FOL1	P53848	824 aa		10.75	□□□□□ -0.69
LIP1	YMR298W	CIT1	P00890	479 aa		10.74	□□□□□ -0.69
LIP1	YMR298W	ADP1	P25371	1049 aa		10.74	□□□□□ -0.69
LIP1	YMR298W	MRPL10	P36520	322 aa		10.74	□□□□□ -0.69
LIP1	YMR298W	RRM3	P38766	723 aa		10.74	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms