RNA–Protein interactions for RNA: YMR276W

DSK2, Transcript of Nuclear-enriched ubiquitin-like polyubiquitin-binding protein, yeast

Gene DSK2, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSK2	YMR276W	ULP1	Q02724	621 aa		14.04	□□□□□ -0.16
DSK2	YMR276W	ANP1	P32629	500 aa		14.03	□□□□□ -0.16
DSK2	YMR276W	GPB2	P39717	880 aa		14.03	□□□□□ -0.16
DSK2	YMR276W	SPN1	Q06505	410 aa	Predicted RBP	14.03	□□□□□ -0.16
DSK2	YMR276W	TPM1	P17536	199 aa	Known RBP	14.02	□□□□□ -0.17
DSK2	YMR276W	CRG1	P38892	291 aa	RIP-Chip data	14.02	□□□□□ -0.17	not detected
DSK2	YMR276W	YAF9	P53930	226 aa		14.02	□□□□□ -0.17
DSK2	YMR276W	FOL1	P53848	824 aa		14.01	□□□□□ -0.17
DSK2	YMR276W	VPS30	Q02948	557 aa		14.01	□□□□□ -0.17
DSK2	YMR276W	RAD18	P10862	487 aa		14	□□□□□ -0.17
DSK2	YMR276W	YKR018C	P36114	725 aa		14	□□□□□ -0.17
DSK2	YMR276W	BRN1	P38170	754 aa		14	□□□□□ -0.17
DSK2	YMR276W	ALD6	P54115	500 aa	Known RBP	14	□□□□□ -0.17
DSK2	YMR276W	ICL2	Q12031	575 aa		14	□□□□□ -0.17
DSK2	YMR276W	RER2	P35196	286 aa		13.99	□□□□□ -0.17
DSK2	YMR276W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.99	□□□□□ -0.17	not detected
DSK2	YMR276W	RPL8B	P29453	256 aa	Known RBP	13.98	□□□□□ -0.17
DSK2	YMR276W	PHO88	P38264	188 aa	Predicted RBP	13.98	□□□□□ -0.17
DSK2	YMR276W	MXR1	P40029	184 aa		13.98	□□□□□ -0.17
DSK2	YMR276W	HDA1	P53973	706 aa		13.98	□□□□□ -0.17
DSK2	YMR276W	RPT6	Q01939	405 aa	Known RBP	13.98	□□□□□ -0.17
DSK2	YMR276W	TAO3	P40468	2376 aa		13.97	□□□□□ -0.17
DSK2	YMR276W	IMP2'	P32351	346 aa		13.97	□□□□□ -0.17
DSK2	YMR276W	VPS45	P38932	577 aa		13.97	□□□□□ -0.17
DSK2	YMR276W	MET7	Q08645	548 aa		13.97	□□□□□ -0.17
DSK2	YMR276W	CLF1	Q12309	687 aa	Predicted RBP	13.97	□□□□□ -0.17
DSK2	YMR276W	CDC19	P00549	500 aa	Known RBP	13.96	□□□□□ -0.17
DSK2	YMR276W	NUC1	P08466	329 aa		13.96	□□□□□ -0.17
DSK2	YMR276W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	13.96	□□□□□ -0.17	not detected
DSK2	YMR276W	UTR4	P32626	227 aa		13.96	□□□□□ -0.17
DSK2	YMR276W	CIC1	P38779	376 aa	Known RBP	13.96	□□□□□ -0.17
DSK2	YMR276W	PTK2	P47116	818 aa	Known RBP	13.96	□□□□□ -0.17
DSK2	YMR276W	VPS62	P53285	467 aa		13.96	□□□□□ -0.17
DSK2	YMR276W	GCR2	Q01722	534 aa		13.96	□□□□□ -0.17
DSK2	YMR276W	DUS4	Q06063	367 aa		13.96	□□□□□ -0.17
DSK2	YMR276W	YGR125W	P53273	1036 aa		13.95	□□□□□ -0.18
DSK2	YMR276W	MAK31	P23059	88 aa		13.94	□□□□□ -0.18
DSK2	YMR276W	PEP3	P27801	918 aa		13.94	□□□□□ -0.18
DSK2	YMR276W	MYO5	Q04439	1219 aa	Known RBP	13.94	□□□□□ -0.18
DSK2	YMR276W	SAM1	P10659	382 aa	Known RBP	13.93	□□□□□ -0.18
DSK2	YMR276W	SRP40	P32583	406 aa	Predicted RBP	13.93	□□□□□ -0.18
DSK2	YMR276W	RGT1	P32862	1170 aa		13.93	□□□□□ -0.18
DSK2	YMR276W	HXT17	P53631	564 aa		13.93	□□□□□ -0.18
DSK2	YMR276W	TFC6	Q06339	672 aa		13.93	□□□□□ -0.18
DSK2	YMR276W	CSC1	Q06538	782 aa		13.93	□□□□□ -0.18
DSK2	YMR276W	UTP4	Q06679	776 aa	Known RBP	13.93	□□□□□ -0.18
DSK2	YMR276W	YOR131C	Q12486	218 aa		13.93	□□□□□ -0.18
DSK2	YMR276W	PGA3	Q12746	312 aa	Known RBP	13.93	□□□□□ -0.18
DSK2	YMR276W	LDH1	P38139	375 aa		13.92	□□□□□ -0.18
DSK2	YMR276W	TOM71	P38825	639 aa	Known RBP	13.92	□□□□□ -0.18
DSK2	YMR276W	CSM2	P40465	213 aa		13.92	□□□□□ -0.18
DSK2	YMR276W	ALG2	P43636	503 aa		13.92	□□□□□ -0.18
DSK2	YMR276W	EST2	Q06163	884 aa		13.92	□□□□□ -0.18
DSK2	YMR276W	TGL1	P34163	548 aa		13.91	□□□□□ -0.18
DSK2	YMR276W	BUL2	Q03758	920 aa	Known RBP	13.91	□□□□□ -0.18
DSK2	YMR276W	TMA64	Q04600	565 aa	Known RBP	13.91	□□□□□ -0.18
DSK2	YMR276W	ESF1	Q06344	628 aa	Known RBP	13.91	□□□□□ -0.18
DSK2	YMR276W	LSB1	P53281	241 aa		13.9	□□□□□ -0.18
DSK2	YMR276W	BRE5	P53741	515 aa	Known RBP	13.9	□□□□□ -0.18
DSK2	YMR276W	SPH1	Q06160	661 aa		13.9	□□□□□ -0.18
DSK2	YMR276W	SUE1	Q06524	206 aa		13.9	□□□□□ -0.18
DSK2	YMR276W	SRP54	P20424	541 aa	Known RBP	13.89	□□□□□ -0.19
DSK2	YMR276W	DLD1	P32891	587 aa		13.89	□□□□□ -0.19
DSK2	YMR276W	HXT13	P39924	564 aa		13.89	□□□□□ -0.19
DSK2	YMR276W	PRY3	P47033	881 aa		13.89	□□□□□ -0.19
DSK2	YMR276W	ISW2	Q08773	1120 aa		13.89	□□□□□ -0.19
DSK2	YMR276W	SUT2	Q12286	268 aa		13.89	□□□□□ -0.19
DSK2	YMR276W	SEC20	P28791	383 aa		13.88	□□□□□ -0.19
DSK2	YMR276W	SHP1	P34223	423 aa		13.88	□□□□□ -0.19
DSK2	YMR276W	DUS3	Q06053	668 aa	Known RBP	13.88	□□□□□ -0.19
DSK2	YMR276W	ECM29	P38737	1868 aa		13.87	□□□□□ -0.19
DSK2	YMR276W	VPS29	P38759	282 aa		13.87	□□□□□ -0.19
DSK2	YMR276W	AIM21	P40563	679 aa		13.87	□□□□□ -0.19
DSK2	YMR276W	YJR107W	P47145	328 aa		13.87	□□□□□ -0.19
DSK2	YMR276W	MDM1	Q01846	1127 aa		13.87	□□□□□ -0.19
DSK2	YMR276W	SIS2	P36024	562 aa		13.86	□□□□□ -0.19
DSK2	YMR276W	SLD5	Q03406	294 aa		13.86	□□□□□ -0.19
DSK2	YMR276W	YOR111W	Q99210	232 aa		13.86	□□□□□ -0.19
DSK2	YMR276W	MCR1	P36060	302 aa	Known RBP	13.85	□□□□□ -0.19
DSK2	YMR276W	SPO22	P40511	975 aa		13.85	□□□□□ -0.19
DSK2	YMR276W	GUD1	Q07729	489 aa		13.85	□□□□□ -0.19
DSK2	YMR276W	RNR3	P21672	869 aa	Known RBP	13.84	□□□□□ -0.19
DSK2	YMR276W	MAL31	P38156	614 aa		13.84	□□□□□ -0.19
DSK2	YMR276W	AFG3	P39925	761 aa		13.84	□□□□□ -0.19
DSK2	YMR276W	FMS1	P50264	508 aa		13.84	□□□□□ -0.19
DSK2	YMR276W	DSE3	Q08729	430 aa		13.84	□□□□□ -0.19
DSK2	YMR276W	MSC6	Q08818	692 aa	Known RBP	13.84	□□□□□ -0.19
DSK2	YMR276W	MDM20	Q12387	796 aa	Known RBP	13.84	□□□□□ -0.19
DSK2	YMR276W	UIP5	P36137	443 aa		13.83	□□□□□ -0.2
DSK2	YMR276W	VPS53	P47061	822 aa		13.83	□□□□□ -0.2
DSK2	YMR276W	MAM3	Q12296	706 aa		13.83	□□□□□ -0.2
DSK2	YMR276W	ERP3	Q12403	225 aa		13.83	□□□□□ -0.2
DSK2	YMR276W	RKM4	Q12504	494 aa		13.83	□□□□□ -0.2
DSK2	YMR276W	BCS1	P32839	456 aa		13.82	□□□□□ -0.2
DSK2	YMR276W	NDT80	P38830	627 aa		13.82	□□□□□ -0.2
DSK2	YMR276W	TPM2	P40414	161 aa		13.82	□□□□□ -0.2
DSK2	YMR276W	KRI1	P42846	591 aa	Known RBP	13.82	□□□□□ -0.2
DSK2	YMR276W	LIF1	P53150	421 aa		13.82	□□□□□ -0.2
DSK2	YMR276W	ECM30	Q06673	1274 aa		13.82	□□□□□ -0.2
DSK2	YMR276W	VIP1	Q06685	1146 aa	Known RBP	13.82	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 77.6 ms