RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	AVT1	P47082	602 aa		4.78	□□□□□ -1.64
TIF11	YMR260C	NUT1	P53114	1132 aa		4.78	□□□□□ -1.64
TIF11	YMR260C	YAF9	P53930	226 aa		4.78	□□□□□ -1.64
TIF11	YMR260C	YBL113C	Q7M4S9	792 aa		4.78	□□□□□ -1.64
TIF11	YMR260C	ALT1	P52893	592 aa		4.77	□□□□□ -1.65
TIF11	YMR260C	GCD1	P09032	578 aa	Predicted RBP	4.76	□□□□□ -1.65
TIF11	YMR260C	SEA4	P38164	1038 aa		4.76	□□□□□ -1.65
TIF11	YMR260C	NUT2	Q06213	157 aa		4.76	□□□□□ -1.65
TIF11	YMR260C	NSI1	Q12457	570 aa		4.76	□□□□□ -1.65
TIF11	YMR260C	FRT1	Q99332	602 aa		4.76	□□□□□ -1.65
TIF11	YMR260C	WHI3	P34761	661 aa	Known RBP	4.75	□□□□□ -1.65
TIF11	YMR260C	REI1	P38344	393 aa	Predicted RBP	4.75	□□□□□ -1.65
TIF11	YMR260C	RVS167	P39743	482 aa	Known RBP	4.75	□□□□□ -1.65
TIF11	YMR260C	SDH1	Q00711	640 aa		4.75	□□□□□ -1.65
TIF11	YMR260C	GPI13	Q07830	1017 aa		4.75	□□□□□ -1.65
TIF11	YMR260C	MSH4	P40965	878 aa	Predicted RBP	4.74	□□□□□ -1.65
TIF11	YMR260C	OYE3	P41816	400 aa	Predicted RBP	4.74	□□□□□ -1.65
TIF11	YMR260C	ECL1	P48235	211 aa		4.74	□□□□□ -1.65
TIF11	YMR260C	SAM37	P50110	327 aa		4.74	□□□□□ -1.65
TIF11	YMR260C	NOC3	Q07896	663 aa	Predicted RBP	4.74	□□□□□ -1.65
TIF11	YMR260C	INP54	Q08227	384 aa	Known RBP	4.74	□□□□□ -1.65
TIF11	YMR260C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.73	□□□□□ -1.65
TIF11	YMR260C	TY1A-DR6	P0CX70	440 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	TY1A-ER1	P0CX71	440 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	TY1A-LR2	P0CX72	440 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	TY1A-PL	P0CX73	440 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	TY1A-JR1	P0CX74	440 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	TY1A-LR3	P0CX75	440 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	TY1A-ML2	P0CX76	440 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	SMY2	P32909	740 aa	Known RBP	4.73	□□□□□ -1.65
TIF11	YMR260C	CIC1	P38779	376 aa	Known RBP	4.73	□□□□□ -1.65
TIF11	YMR260C	SHU2	P38957	223 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	NIT1	P40447	199 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	RCM1	P53972	490 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	ORC3	P54790	616 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	TY1A-GR1	Q12085	440 aa		4.73	□□□□□ -1.65
TIF11	YMR260C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.73	□□□□□ -1.65
TIF11	YMR260C	TY1A-OL	Q92392	440 aa	Known RBP	4.73	□□□□□ -1.65
TIF11	YMR260C	RPS4A	P0CX35	261 aa	Known RBP	4.72	□□□□□ -1.65
TIF11	YMR260C	RPS4B	P0CX36	261 aa	Known RBP	4.72	□□□□□ -1.65
TIF11	YMR260C	EXO5	P38289	585 aa		4.72	□□□□□ -1.65
TIF11	YMR260C	HAT1	Q12341	374 aa		4.72	□□□□□ -1.65
TIF11	YMR260C	MCM5	P29496	775 aa	Known RBP	4.71	□□□□□ -1.66
TIF11	YMR260C	NNK1	P36003	928 aa		4.71	□□□□□ -1.66
TIF11	YMR260C	YGR045C	P53229	120 aa		4.71	□□□□□ -1.66
TIF11	YMR260C	NOG1	Q02892	647 aa	Known RBP	4.71	□□□□□ -1.66
TIF11	YMR260C	YCS4	Q06156	1176 aa		4.71	□□□□□ -1.66
TIF11	YMR260C	DFG16	Q99234	619 aa		4.71	□□□□□ -1.66
TIF11	YMR260C	LRG1	P35688	1017 aa		4.7	□□□□□ -1.66
TIF11	YMR260C	PPX1	P38698	397 aa		4.7	□□□□□ -1.66
TIF11	YMR260C	ALG6	Q12001	544 aa	Known RBP	4.7	□□□□□ -1.66
TIF11	YMR260C	YVC1	Q12324	675 aa		4.7	□□□□□ -1.66
TIF11	YMR260C	NFS1	P25374	497 aa		4.69	□□□□□ -1.66
TIF11	YMR260C	SEG2	P34250	1132 aa		4.69	□□□□□ -1.66
TIF11	YMR260C	YKL077W	P36081	392 aa		4.69	□□□□□ -1.66
TIF11	YMR260C	POL12	P38121	705 aa	Predicted RBP	4.69	□□□□□ -1.66
TIF11	YMR260C	NEM1	P38757	446 aa		4.69	□□□□□ -1.66
TIF11	YMR260C	SSF1	P38789	453 aa	Predicted RBP	4.69	□□□□□ -1.66
TIF11	YMR260C	MON1	P53129	644 aa		4.69	□□□□□ -1.66
TIF11	YMR260C	GCD6	P32501	712 aa	Known RBP	4.68	□□□□□ -1.66
TIF11	YMR260C	HSP78	P33416	811 aa		4.68	□□□□□ -1.66
TIF11	YMR260C	VPS35	P34110	944 aa		4.68	□□□□□ -1.66
TIF11	YMR260C	YHL050C	P38721	697 aa		4.68	□□□□□ -1.66
TIF11	YMR260C	YHR219W	P38900	624 aa		4.68	□□□□□ -1.66
TIF11	YMR260C	PEX7	P39108	375 aa		4.68	□□□□□ -1.66
TIF11	YMR260C	ELA1	P53861	379 aa	Predicted RBP	4.68	□□□□□ -1.66
TIF11	YMR260C	EAR1	Q03212	550 aa		4.68	□□□□□ -1.66
TIF11	YMR260C	TRE1	Q08919	783 aa		4.68	□□□□□ -1.66
TIF11	YMR260C	PHO4	P07270	312 aa	Known RBP	4.67	□□□□□ -1.66
TIF11	YMR260C	ADP1	P25371	1049 aa		4.67	□□□□□ -1.66
TIF11	YMR260C	MTR4	P47047	1073 aa	Known RBP	4.67	□□□□□ -1.66
TIF11	YMR260C	PRP43	P53131	767 aa	Known RBP	4.67	□□□□□ -1.66
TIF11	YMR260C	AVO1	Q08236	1176 aa		4.67	□□□□□ -1.66
TIF11	YMR260C	PRP40	P33203	583 aa	Known RBP	4.66	□□□□□ -1.66
TIF11	YMR260C	TSA1	P34760	196 aa	Known RBP	4.66	□□□□□ -1.66
TIF11	YMR260C	STM1	P39015	273 aa	Known RBP	4.66	□□□□□ -1.66
TIF11	YMR260C	UBP5	P39944	805 aa		4.66	□□□□□ -1.66
TIF11	YMR260C	SLS1	P42900	643 aa		4.66	□□□□□ -1.66
TIF11	YMR260C	CDA2	Q06703	312 aa		4.66	□□□□□ -1.66
TIF11	YMR260C	PUS7	Q08647	676 aa	Known RBP	4.66	□□□□□ -1.66
TIF11	YMR260C	LPX1	Q12405	387 aa	Known RBP	4.66	□□□□□ -1.66
TIF11	YMR260C	KAR2	P16474	682 aa	Known RBP	4.65	□□□□□ -1.67
TIF11	YMR260C	VMA4	P22203	233 aa	Known RBP	4.65	□□□□□ -1.67
TIF11	YMR260C	RNQ1	P25367	405 aa		4.65	□□□□□ -1.67
TIF11	YMR260C	YAR028W	P39548	234 aa		4.65	□□□□□ -1.67
TIF11	YMR260C	UTP5	Q04177	643 aa	Known RBP	4.65	□□□□□ -1.67
TIF11	YMR260C	SSY1	Q03770	852 aa		4.64	□□□□□ -1.67
TIF11	YMR260C	RKM2	Q03942	479 aa		4.64	□□□□□ -1.67
TIF11	YMR260C	MSH3	P25336	1018 aa		4.63	□□□□□ -1.67
TIF11	YMR260C	PRO1	P32264	428 aa		4.63	□□□□□ -1.67
TIF11	YMR260C	MET4	P32389	672 aa		4.63	□□□□□ -1.67
TIF11	YMR260C	HSE1	P38753	452 aa		4.63	□□□□□ -1.67
TIF11	YMR260C	HRK1	Q08732	759 aa	Known RBP	4.63	□□□□□ -1.67
TIF11	YMR260C	MSC6	Q08818	692 aa	Known RBP	4.63	□□□□□ -1.67
TIF11	YMR260C	SAM35	P14693	329 aa		4.62	□□□□□ -1.67
TIF11	YMR260C	GAS1	P22146	559 aa	Known RBP	4.62	□□□□□ -1.67
TIF11	YMR260C	RDH54	P38086	958 aa		4.62	□□□□□ -1.67
TIF11	YMR260C	XKS1	P42826	600 aa		4.62	□□□□□ -1.67
TIF11	YMR260C	ULP1	Q02724	621 aa		4.62	□□□□□ -1.67
TIF11	YMR260C	TPP1	Q03796	238 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms