RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W YAP3P38749 330 aa2.22□□□□□ -2.05
RTP1YMR185W YFR016CP43597 1233 aaKnown RBP2.22□□□□□ -2.05
RTP1YMR185W ORC1P54784 914 aaPredicted RBP2.22□□□□□ -2.05
RTP1YMR185W PRK1P40494 810 aa2.21□□□□□ -2.05
RTP1YMR185W ALD4P46367 519 aaKnown RBP2.21□□□□□ -2.05
RTP1YMR185W NOT3P06102 836 aaKnown RBP2.21□□□□□ -2.06
RTP1YMR185W RAD2P07276 1031 aa2.21□□□□□ -2.06
RTP1YMR185W PCT1P13259 424 aa2.21□□□□□ -2.06
RTP1YMR185W HAP4P14064 554 aa2.21□□□□□ -2.06
RTP1YMR185W VAN1P23642 535 aa2.21□□□□□ -2.06
RTP1YMR185W VPS24P36095 224 aaKnown RBP2.21□□□□□ -2.06
RTP1YMR185W ACS2P52910 683 aaKnown RBP2.21□□□□□ -2.06
RTP1YMR185W TAP42Q04372 366 aa2.21□□□□□ -2.06
RTP1YMR185W URN1Q06525 465 aaKnown RBP2.21□□□□□ -2.06
RTP1YMR185W PHO87P25360 923 aa2.21□□□□□ -2.06
RTP1YMR185W KAP122P32767 1081 aa2.21□□□□□ -2.06
RTP1YMR185W LIP5P32875 414 aa2.21□□□□□ -2.06
RTP1YMR185W SCD5P34758 872 aa2.21□□□□□ -2.06
RTP1YMR185W RRM3P38766 723 aa2.21□□□□□ -2.06
RTP1YMR185W YIL092WP40497 633 aa2.21□□□□□ -2.06
RTP1YMR185W CUS1Q02554 436 aaPredicted RBP2.21□□□□□ -2.06
RTP1YMR185W GAS5Q08193 484 aa2.21□□□□□ -2.06
RTP1YMR185W GAS4Q08271 471 aa2.21□□□□□ -2.06
RTP1YMR185W NAP1P25293 417 aaKnown RBP2.2□□□□□ -2.06
RTP1YMR185W MNN4P36044 1178 aa2.2□□□□□ -2.06
RTP1YMR185W MSC7P38694 644 aa2.2□□□□□ -2.06
RTP1YMR185W SAP155P43612 1002 aa2.2□□□□□ -2.06
RTP1YMR185W RRP46P53256 223 aaPredicted RBP2.2□□□□□ -2.06
RTP1YMR185W HEF3P53978 1044 aaKnown RBP2.2□□□□□ -2.06
RTP1YMR185W ECM16Q04217 1267 aaKnown RBP2.2□□□□□ -2.06
RTP1YMR185W MRX10Q05648 414 aa2.2□□□□□ -2.06
RTP1YMR185W MSP1P28737 362 aa2.2□□□□□ -2.06
RTP1YMR185W IPL1P38991 367 aa2.2□□□□□ -2.06
RTP1YMR185W CHZ1P40019 153 aaPredicted RBP2.2□□□□□ -2.06
RTP1YMR185W QDR2P40474 542 aa2.2□□□□□ -2.06
RTP1YMR185W YJL181WP46987 611 aa2.2□□□□□ -2.06
RTP1YMR185W PIL1P53252 339 aaKnown RBP2.2□□□□□ -2.06
RTP1YMR185W RAD9P14737 1309 aa2.19□□□□□ -2.06
RTP1YMR185W MPP10P47083 593 aaKnown RBP2.19□□□□□ -2.06
RTP1YMR185W TRS33Q99394 268 aa2.19□□□□□ -2.06
RTP1YMR185W URB1P34241 1764 aaKnown RBP2.19□□□□□ -2.06
RTP1YMR185W NAR1P23503 491 aaKnown RBP2.19□□□□□ -2.06
RTP1YMR185W PRD1P25375 712 aa2.19□□□□□ -2.06
RTP1YMR185W POL32P47110 350 aa2.19□□□□□ -2.06
RTP1YMR185W TAF8Q03750 510 aa2.19□□□□□ -2.06
RTP1YMR185W RRP5Q05022 1729 aaKnown RBP2.19□□□□□ -2.06
RTP1YMR185W YRF1-2P40105 1681 aa2.19□□□□□ -2.06
RTP1YMR185W QCR6P00127 147 aa2.18□□□□□ -2.06
RTP1YMR185W FUN12P39730 1002 aaKnown RBP2.18□□□□□ -2.06
RTP1YMR185W RTR1P40084 226 aaPredicted RBP2.18□□□□□ -2.06
RTP1YMR185W BUD9P53226 547 aa2.18□□□□□ -2.06
RTP1YMR185W ECM23Q02710 187 aa2.18□□□□□ -2.06
RTP1YMR185W GIS4Q04233 774 aa2.18□□□□□ -2.06
RTP1YMR185W THI22Q06490 572 aa2.18□□□□□ -2.06
RTP1YMR185W DUR1,2P32528 1835 aaKnown RBP2.18□□□□□ -2.06
RTP1YMR185W AUS1Q08409 1394 aa2.18□□□□□ -2.06
RTP1YMR185W GRX4P32642 244 aa2.18□□□□□ -2.06
RTP1YMR185W APM2P38700 605 aa2.18□□□□□ -2.06
RTP1YMR185W AKR1P39010 764 aa2.18□□□□□ -2.06
RTP1YMR185W RPO41P13433 1351 aaKnown RBP2.18□□□□□ -2.06
RTP1YMR185W BNI1P41832 1953 aa2.18□□□□□ -2.06
RTP1YMR185W GAL2P13181 574 aa2.18□□□□□ -2.06
RTP1YMR185W SAC7P17121 654 aa2.18□□□□□ -2.06
RTP1YMR185W RSC6P25632 483 aa2.18□□□□□ -2.06
RTP1YMR185W SIS2P36024 562 aa2.18□□□□□ -2.06
RTP1YMR185W UBX7P38349 436 aa2.18□□□□□ -2.06
RTP1YMR185W TED1P40533 473 aa2.18□□□□□ -2.06
RTP1YMR185W PRP43P53131 767 aaKnown RBP2.17□□□□□ -2.06
RTP1YMR185W SOK2P53438 785 aaPredicted RBP2.17□□□□□ -2.06
RTP1YMR185W YNR040WP53736 256 aa2.17□□□□□ -2.06
RTP1YMR185W UTP4Q06679 776 aaKnown RBP2.17□□□□□ -2.06
RTP1YMR185W RAD50P12753 1312 aa2.17□□□□□ -2.06
RTP1YMR185W PEP12P32854 288 aa2.17□□□□□ -2.06
RTP1YMR185W KAE1P36132 386 aa2.17□□□□□ -2.06
RTP1YMR185W TYS1P36421 394 aaKnown RBP2.17□□□□□ -2.06
RTP1YMR185W ARL1P38116 183 aaKnown RBP2.17□□□□□ -2.06
RTP1YMR185W TOS1P38288 455 aa2.17□□□□□ -2.06
RTP1YMR185W BDH2P39713 417 aa2.17□□□□□ -2.06
RTP1YMR185W IRC24P40580 263 aa2.17□□□□□ -2.06
RTP1YMR185W HYR1P40581 163 aaKnown RBP2.17□□□□□ -2.06
RTP1YMR185W YIL177CP40434 1758 aa2.16□□□□□ -2.06
RTP1YMR185W YJL225CP40889 1758 aa2.16□□□□□ -2.06
RTP1YMR185W FKS3Q04952 1785 aa2.16□□□□□ -2.06
RTP1YMR185W KAR2P16474 682 aaKnown RBP2.16□□□□□ -2.06
RTP1YMR185W RRT14P40470 206 aa2.16□□□□□ -2.06
RTP1YMR185W AIM44Q99299 758 aa2.16□□□□□ -2.06
RTP1YMR185W NUP145P49687 1317 aa2.16□□□□□ -2.06
RTP1YMR185W TY4B-HP0C2J7 1802 aa2.16□□□□□ -2.06
RTP1YMR185W TY4B-JP47024 1803 aa2.16□□□□□ -2.06
RTP1YMR185W ROM2P51862 1356 aaKnown RBP2.16□□□□□ -2.06
RTP1YMR185W AI3P03877 415 aa2.16□□□□□ -2.06
RTP1YMR185W ITC1P53125 1264 aa2.16□□□□□ -2.06
RTP1YMR185W RSC2Q06488 889 aa2.16□□□□□ -2.06
RTP1YMR185W MED7Q08278 222 aa2.16□□□□□ -2.06
RTP1YMR185W LYS2P07702 1392 aa2.15□□□□□ -2.06
RTP1YMR185W DAL5P15365 543 aa2.15□□□□□ -2.06
RTP1YMR185W IDI1P15496 288 aa2.15□□□□□ -2.06
RTP1YMR185W UBP1P25037 809 aa2.15□□□□□ -2.06
RTP1YMR185W LDH1P38139 375 aa2.15□□□□□ -2.06
RTP1YMR185W DYS1P38791 387 aa2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms