RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W YKR018CP36114 725 aa8.96□□□□□ -0.98
NUP53YMR153W GPB2P39717 880 aa8.96□□□□□ -0.98
NUP53YMR153W UBP9P39967 754 aa8.96□□□□□ -0.98
NUP53YMR153W MET7Q08645 548 aa8.96□□□□□ -0.98
NUP53YMR153W RAD50P12753 1312 aa8.95□□□□□ -0.98
NUP53YMR153W TUS1Q06412 1307 aa8.95□□□□□ -0.98
NUP53YMR153W RAD18P10862 487 aa8.95□□□□□ -0.98
NUP53YMR153W PRE10P21242 288 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
NUP53YMR153W DUS4Q06063 367 aa8.95□□□□□ -0.98
NUP53YMR153W FPR4Q06205 392 aaPredicted RBP8.95□□□□□ -0.98
NUP53YMR153W SAM1P10659 382 aaKnown RBP8.94□□□□□ -0.98
NUP53YMR153W SRP40P32583 406 aaPredicted RBP8.94□□□□□ -0.98
NUP53YMR153W UTR4P32626 227 aa8.94□□□□□ -0.98
NUP53YMR153W ANP1P32629 500 aa8.94□□□□□ -0.98
NUP53YMR153W MAL31P38156 614 aa8.94□□□□□ -0.98
NUP53YMR153W MXR1P40029 184 aa8.94□□□□□ -0.98
NUP53YMR153W BRE5P53741 515 aaKnown RBP8.94□□□□□ -0.98
NUP53YMR153W FOL1P53848 824 aa8.94□□□□□ -0.98
NUP53YMR153W ALD6P54115 500 aaKnown RBP8.94□□□□□ -0.98
NUP53YMR153W VPS30Q02948 557 aa8.94□□□□□ -0.98
NUP53YMR153W SKI2P35207 1287 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
NUP53YMR153W MYO3P36006 1272 aa8.93□□□□□ -0.98
NUP53YMR153W VPS45P38932 577 aa8.93□□□□□ -0.98
NUP53YMR153W BUL2Q03758 920 aaKnown RBP8.93□□□□□ -0.98
NUP53YMR153W CDC19P00549 500 aaKnown RBP8.92□□□□□ -0.98
NUP53YMR153W RGT1P32862 1170 aa8.92□□□□□ -0.98
NUP53YMR153W AAP1P37898 856 aaKnown RBP8.92□□□□□ -0.98
NUP53YMR153W PHO88P38264 188 aaPredicted RBP8.92□□□□□ -0.98
NUP53YMR153W PES4P39684 611 aa8.92□□□□□ -0.98
NUP53YMR153W YJR107WP47145 328 aa8.92□□□□□ -0.98
NUP53YMR153W SPN1Q06505 410 aaPredicted RBP8.92□□□□□ -0.98
NUP53YMR153W MAM3Q12296 706 aa8.92□□□□□ -0.98
NUP53YMR153W RPL8BP29453 256 aaKnown RBP8.91□□□□□ -0.98
NUP53YMR153W IMP2'P32351 346 aa8.91□□□□□ -0.98
NUP53YMR153W TOM71P38825 639 aaKnown RBP8.91□□□□□ -0.98
NUP53YMR153W YGR125WP53273 1036 aa8.91□□□□□ -0.98
NUP53YMR153W HDA1P53973 706 aa8.91□□□□□ -0.98
NUP53YMR153W ISW2Q08773 1120 aa8.91□□□□□ -0.98
NUP53YMR153W SUT2Q12286 268 aa8.91□□□□□ -0.98
NUP53YMR153W RER2P35196 286 aa8.9□□□□□ -0.98
NUP53YMR153W CRG1P38892 291 aaRIP-Chip data8.9□□□□□ -0.98not detected
NUP53YMR153W RPT6Q01939 405 aaKnown RBP8.9□□□□□ -0.98
NUP53YMR153W CSC1Q06538 782 aa8.9□□□□□ -0.98
NUP53YMR153W RKM4Q12504 494 aa8.9□□□□□ -0.98
NUP53YMR153W MYO1P08964 1928 aa8.9□□□□□ -0.99
NUP53YMR153W NUC1P08466 329 aa8.89□□□□□ -0.99
NUP53YMR153W CIC1P38779 376 aaKnown RBP8.89□□□□□ -0.99
NUP53YMR153W SLD5Q03406 294 aa8.89□□□□□ -0.99
NUP53YMR153W SUE1Q06524 206 aa8.89□□□□□ -0.99
NUP53YMR153W UTP4Q06679 776 aaKnown RBP8.89□□□□□ -0.99
NUP53YMR153W TPM1P17536 199 aaKnown RBP8.88□□□□□ -0.99
NUP53YMR153W SHP1P34223 423 aa8.88□□□□□ -0.99
NUP53YMR153W UIP5P36137 443 aa8.88□□□□□ -0.99
NUP53YMR153W PRY3P47033 881 aa8.88□□□□□ -0.99
NUP53YMR153W PTK2P47116 818 aaKnown RBP8.88□□□□□ -0.99
NUP53YMR153W TMA64Q04600 565 aaKnown RBP8.88□□□□□ -0.99
NUP53YMR153W ESF1Q06344 628 aaKnown RBP8.88□□□□□ -0.99
NUP53YMR153W MSC6Q08818 692 aaKnown RBP8.88□□□□□ -0.99
NUP53YMR153W PGA3Q12746 312 aaKnown RBP8.88□□□□□ -0.99
NUP53YMR153W MAK31P23059 88 aa8.88□□□□□ -0.99
NUP53YMR153W TGL1P34163 548 aa8.88□□□□□ -0.99
NUP53YMR153W BRN1P38170 754 aa8.88□□□□□ -0.99
NUP53YMR153W AFG3P39925 761 aa8.88□□□□□ -0.99
NUP53YMR153W CSM2P40465 213 aa8.88□□□□□ -0.99
NUP53YMR153W DUS3Q06053 668 aaKnown RBP8.88□□□□□ -0.99
NUP53YMR153W CLF1Q12309 687 aaPredicted RBP8.88□□□□□ -0.99
NUP53YMR153W MDM20Q12387 796 aaKnown RBP8.88□□□□□ -0.99
NUP53YMR153W BCS1P32839 456 aa8.87□□□□□ -0.99
NUP53YMR153W LSB1P53281 241 aa8.87□□□□□ -0.99
NUP53YMR153W MYO5Q04439 1219 aaKnown RBP8.87□□□□□ -0.99
NUP53YMR153W SPH1Q06160 661 aa8.87□□□□□ -0.99
NUP53YMR153W TFC6Q06339 672 aa8.87□□□□□ -0.99
NUP53YMR153W VPS13Q07878 3144 aa8.86□□□□□ -0.99
NUP53YMR153W DBP1P24784 617 aaKnown RBP8.86□□□□□ -0.99
NUP53YMR153W PEP3P27801 918 aa8.86□□□□□ -0.99
NUP53YMR153W ALG2P43636 503 aa8.86□□□□□ -0.99
NUP53YMR153W VPS53P47061 822 aa8.86□□□□□ -0.99
NUP53YMR153W CLA4P48562 842 aa8.86□□□□□ -0.99
NUP53YMR153W ECM30Q06673 1274 aa8.86□□□□□ -0.99
NUP53YMR153W YDR461C-AQ2V2P7 80 aa8.86□□□□□ -0.99
NUP53YMR153W TAO3P40468 2376 aa8.85□□□□□ -0.99
NUP53YMR153W KTR2P33550 425 aa8.85□□□□□ -0.99
NUP53YMR153W MCR1P36060 302 aaKnown RBP8.85□□□□□ -0.99
NUP53YMR153W YKR023WP36119 530 aaKnown RBP8.85□□□□□ -0.99
NUP53YMR153W KSP1P38691 1029 aaKnown RBP8.85□□□□□ -0.99
NUP53YMR153W VPS29P38759 282 aa8.85□□□□□ -0.99
NUP53YMR153W NDT80P38830 627 aa8.85□□□□□ -0.99
NUP53YMR153W FIR1P40020 876 aa8.85□□□□□ -0.99
NUP53YMR153W AIM21P40563 679 aa8.85□□□□□ -0.99
NUP53YMR153W EST2Q06163 884 aa8.85□□□□□ -0.99
NUP53YMR153W ERP3Q12403 225 aa8.85□□□□□ -0.99
NUP53YMR153W MOT1P32333 1867 aa8.84□□□□□ -0.99
NUP53YMR153W YGL039WP53183 348 aaKnown RBP8.84□□□□□ -0.99
NUP53YMR153W HXT17P53631 564 aa8.84□□□□□ -0.99
NUP53YMR153W YPL034WQ03083 165 aa8.84□□□□□ -0.99
NUP53YMR153W PDC1P06169 563 aaKnown RBP8.83□□□□□ -1
NUP53YMR153W SRP54P20424 541 aaKnown RBP8.83□□□□□ -1
NUP53YMR153W YUR1P26725 428 aa8.83□□□□□ -1
NUP53YMR153W SEC20P28791 383 aa8.83□□□□□ -1
NUP53YMR153W MCM4P30665 933 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms