RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE1YMR145C SNZ1Q03148 297 aa8.1□□□□□ -1.11
NDE1YMR145C RRN11Q04712 507 aa8.1□□□□□ -1.11
NDE1YMR145C RKM1Q08961 583 aaPredicted RBP8.1□□□□□ -1.11
NDE1YMR145C LSO2Q3E772 92 aaKnown RBP8.1□□□□□ -1.11
NDE1YMR145C HIS3P06633 220 aa8.09□□□□□ -1.11
NDE1YMR145C HEM1P09950 548 aaPredicted RBP8.09□□□□□ -1.11
NDE1YMR145C RPB4P20433 221 aaPredicted RBP8.09□□□□□ -1.11
NDE1YMR145C SUI2P20459 304 aaKnown RBP8.09□□□□□ -1.11
NDE1YMR145C ATG19P35193 415 aa8.09□□□□□ -1.11
NDE1YMR145C SPT8P38915 602 aa8.09□□□□□ -1.11
NDE1YMR145C YGL242CP53066 181 aa8.09□□□□□ -1.11
NDE1YMR145C SHE10P53075 577 aa8.09□□□□□ -1.11
NDE1YMR145C ECM11Q04110 302 aa8.09□□□□□ -1.11
NDE1YMR145C YKU80Q04437 629 aa8.09□□□□□ -1.11
NDE1YMR145C POB3Q04636 552 aaKnown RBP8.09□□□□□ -1.11
NDE1YMR145C FAR8Q05040 523 aa8.09□□□□□ -1.11
NDE1YMR145C OMS1Q06668 471 aa8.09□□□□□ -1.11
NDE1YMR145C ATG9Q12142 997 aa8.09□□□□□ -1.11
NDE1YMR145C LEU1P07264 779 aaKnown RBP8.08□□□□□ -1.12
NDE1YMR145C SPE2P21182 396 aa8.08□□□□□ -1.12
NDE1YMR145C SMY1P32364 656 aaKnown RBP8.08□□□□□ -1.12
NDE1YMR145C MRE11P32829 692 aa8.08□□□□□ -1.12
NDE1YMR145C NPL4P33755 580 aa8.08□□□□□ -1.12
NDE1YMR145C ERP2P39704 215 aa8.08□□□□□ -1.12
NDE1YMR145C NOC2P39744 710 aaKnown RBP8.08□□□□□ -1.12
NDE1YMR145C SLX8P40072 274 aa8.08□□□□□ -1.12
NDE1YMR145C STB1P42845 420 aa8.08□□□□□ -1.12
NDE1YMR145C IES1P43579 692 aa8.08□□□□□ -1.12
NDE1YMR145C IML2P47031 731 aa8.08□□□□□ -1.12
NDE1YMR145C SGM1P47166 707 aa8.08□□□□□ -1.12
NDE1YMR145C MFM1Q02783 413 aa8.08□□□□□ -1.12
NDE1YMR145C YML020WQ03722 664 aa8.08□□□□□ -1.12
NDE1YMR145C TAP42Q04372 366 aa8.08□□□□□ -1.12
NDE1YMR145C KEX1P09620 729 aa8.08□□□□□ -1.12
NDE1YMR145C PRP16P15938 1071 aaPredicted RBP8.08□□□□□ -1.12
NDE1YMR145C RPC19P28000 142 aaKnown RBP8.08□□□□□ -1.12
NDE1YMR145C RPC34P32910 317 aa8.08□□□□□ -1.12
NDE1YMR145C YBR242WP38331 238 aa8.08□□□□□ -1.12
NDE1YMR145C RAD17P48581 401 aa8.08□□□□□ -1.12
NDE1YMR145C GPI8P49018 411 aa8.08□□□□□ -1.12
NDE1YMR145C ESBP6P53918 673 aa8.08□□□□□ -1.12
NDE1YMR145C SEC5P89102 971 aa8.08□□□□□ -1.12
NDE1YMR145C MGR3Q04472 501 aa8.08□□□□□ -1.12
NDE1YMR145C EIS1Q05050 843 aaKnown RBP8.08□□□□□ -1.12
NDE1YMR145C DPL1Q05567 589 aa8.08□□□□□ -1.12
NDE1YMR145C COG4Q06096 861 aa8.08□□□□□ -1.12
NDE1YMR145C YRM1Q12340 786 aa8.08□□□□□ -1.12
NDE1YMR145C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
NDE1YMR145C YIL002W-AQ3E7Z5 69 aa8.08□□□□□ -1.12
NDE1YMR145C GCD2P12754 651 aaPredicted RBP8.07□□□□□ -1.12
NDE1YMR145C PWP2P25635 923 aaKnown RBP8.07□□□□□ -1.12
NDE1YMR145C SEC8P32855 1065 aa8.07□□□□□ -1.12
NDE1YMR145C BMH2P34730 273 aaKnown RBP8.07□□□□□ -1.12
NDE1YMR145C ESL2P36168 1195 aa8.07□□□□□ -1.12
NDE1YMR145C LIN1P38852 340 aaPredicted RBP8.07□□□□□ -1.12
NDE1YMR145C YHB1P39676 399 aaKnown RBP8.07□□□□□ -1.12
NDE1YMR145C TMN3P40071 706 aa8.07□□□□□ -1.12
NDE1YMR145C PHB1P40961 287 aa8.07□□□□□ -1.12
NDE1YMR145C SSL2Q00578 843 aa8.07□□□□□ -1.12
NDE1YMR145C ULP1Q02724 621 aa8.07□□□□□ -1.12
NDE1YMR145C SRP1Q02821 542 aaKnown RBP8.07□□□□□ -1.12
NDE1YMR145C CWC15Q03772 175 aaKnown RBP8.07□□□□□ -1.12
NDE1YMR145C TSR2Q06672 205 aaKnown RBP8.07□□□□□ -1.12
NDE1YMR145C YOR352WQ08816 343 aa8.07□□□□□ -1.12
NDE1YMR145C NOT5Q12514 560 aaPredicted RBP8.07□□□□□ -1.12
NDE1YMR145C HTZ1Q12692 134 aaKnown RBP8.07□□□□□ -1.12
NDE1YMR145C PMR1P13586 950 aa8.06□□□□□ -1.12
NDE1YMR145C TAL1P15019 335 aaKnown RBP8.06□□□□□ -1.12
NDE1YMR145C MER1P16523 270 aa8.06□□□□□ -1.12
NDE1YMR145C PLC1P32383 869 aa8.06□□□□□ -1.12
NDE1YMR145C SIP3P38717 1229 aa8.06□□□□□ -1.12
NDE1YMR145C GCD10P41814 478 aa8.06□□□□□ -1.12
NDE1YMR145C PXA1P41909 870 aa8.06□□□□□ -1.12
NDE1YMR145C JJJ2P46997 583 aa8.06□□□□□ -1.12
NDE1YMR145C SNX4P47057 423 aa8.06□□□□□ -1.12
NDE1YMR145C VPS53P47061 822 aa8.06□□□□□ -1.12
NDE1YMR145C RBL2P48606 106 aaKnown RBP8.06□□□□□ -1.12
NDE1YMR145C CWH41P53008 833 aa8.06□□□□□ -1.12
NDE1YMR145C NOP12Q08208 459 aaKnown RBP8.06□□□□□ -1.12
NDE1YMR145C ERP4Q12450 207 aa8.06□□□□□ -1.12
NDE1YMR145C YRF1-4O13559 1382 aa8.06□□□□□ -1.12
NDE1YMR145C BPT1P14772 1559 aa8.05□□□□□ -1.12
NDE1YMR145C TYR1P20049 452 aa8.05□□□□□ -1.12
NDE1YMR145C RIB7P33312 244 aa8.05□□□□□ -1.12
NDE1YMR145C MPT5P39016 859 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
NDE1YMR145C MET12P46151 657 aa8.05□□□□□ -1.12
NDE1YMR145C HOP2P53187 214 aa8.05□□□□□ -1.12
NDE1YMR145C YGR266WP53326 701 aa8.05□□□□□ -1.12
NDE1YMR145C DIP5P53388 608 aa8.05□□□□□ -1.12
NDE1YMR145C RAT1Q02792 1006 aaKnown RBP8.05□□□□□ -1.12
NDE1YMR145C BDF2Q07442 638 aa8.05□□□□□ -1.12
NDE1YMR145C SNU66Q12420 587 aaPredicted RBP8.05□□□□□ -1.12
NDE1YMR145C YOL098CQ12496 1037 aa8.05□□□□□ -1.12
NDE1YMR145C VMA1P17255 1071 aaKnown RBP8.05□□□□□ -1.12
NDE1YMR145C SLA1P32790 1244 aa8.05□□□□□ -1.12
NDE1YMR145C UIP5P36137 443 aa8.05□□□□□ -1.12
NDE1YMR145C MEF2P39677 819 aa8.05□□□□□ -1.12
NDE1YMR145C YER034WP40022 185 aaKnown RBP8.05□□□□□ -1.12
NDE1YMR145C NPA3P47122 385 aa8.05□□□□□ -1.12
NDE1YMR145C SRB7P47822 140 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms