RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W ERV41Q04651 352 aa5.96□□□□□ -1.46
SPG4YMR107W GAS4Q08271 471 aa5.96□□□□□ -1.46
SPG4YMR107W GIN4Q12263 1142 aa5.96□□□□□ -1.46
SPG4YMR107W RPS24AP0CX31 135 aaKnown RBP5.95□□□□□ -1.46
SPG4YMR107W RPS24BP0CX32 135 aaKnown RBP5.95□□□□□ -1.46
SPG4YMR107W PMR1P13586 950 aa5.95□□□□□ -1.46
SPG4YMR107W CDC15P27636 974 aa5.95□□□□□ -1.46
SPG4YMR107W VRP1P37370 817 aa5.95□□□□□ -1.46
SPG4YMR107W BUD16P39988 312 aa5.95□□□□□ -1.46
SPG4YMR107W TFG2P41896 400 aaPredicted RBP5.95□□□□□ -1.46
SPG4YMR107W BDP1P46678 594 aa5.95□□□□□ -1.46
SPG4YMR107W YJR008WP47085 338 aa5.95□□□□□ -1.46
SPG4YMR107W PEX21P50091 288 aa5.95□□□□□ -1.46
SPG4YMR107W RTF1P53064 558 aa5.95□□□□□ -1.46
SPG4YMR107W DNM1P54861 757 aa5.95□□□□□ -1.46
SPG4YMR107W RMD1Q03441 430 aa5.95□□□□□ -1.46
SPG4YMR107W STE23Q06010 1027 aa5.95□□□□□ -1.46
SPG4YMR107W YLR177WQ06251 628 aa5.95□□□□□ -1.46
SPG4YMR107W CSC1Q06538 782 aa5.95□□□□□ -1.46
SPG4YMR107W ABP140Q08641 628 aaKnown RBP5.95□□□□□ -1.46
SPG4YMR107W SLP1Q12232 587 aa5.95□□□□□ -1.46
SPG4YMR107W MATALPHA2P0CY08 210 aa5.94□□□□□ -1.46
SPG4YMR107W HMLALPHA2P0CY09 210 aa5.94□□□□□ -1.46
SPG4YMR107W KRS1P15180 591 aaKnown RBP5.94□□□□□ -1.46
SPG4YMR107W DPH5P32469 300 aaPredicted RBP5.94□□□□□ -1.46
SPG4YMR107W STO1P34160 861 aaKnown RBP5.94□□□□□ -1.46
SPG4YMR107W HEL1P36113 551 aa5.94□□□□□ -1.46
SPG4YMR107W EFM4P40516 257 aa5.94□□□□□ -1.46
SPG4YMR107W MIC19P43594 170 aa5.94□□□□□ -1.46
SPG4YMR107W RRP15Q06511 250 aaPredicted RBP5.94□□□□□ -1.46
SPG4YMR107W TY4B-HP0C2J7 1802 aa5.94□□□□□ -1.46
SPG4YMR107W TY4B-JP47024 1803 aa5.94□□□□□ -1.46
SPG4YMR107W PDC1P06169 563 aaKnown RBP5.93□□□□□ -1.46
SPG4YMR107W PDR1P12383 1068 aa5.93□□□□□ -1.46
SPG4YMR107W SEC23P15303 768 aaKnown RBP5.93□□□□□ -1.46
SPG4YMR107W IME1P21190 360 aa5.93□□□□□ -1.46
SPG4YMR107W REI1P38344 393 aaPredicted RBP5.93□□□□□ -1.46
SPG4YMR107W SAP1P39955 897 aaKnown RBP5.93□□□□□ -1.46
SPG4YMR107W VID28P40547 921 aa5.93□□□□□ -1.46
SPG4YMR107W OSW7P43611 510 aa5.93□□□□□ -1.46
SPG4YMR107W APT1P49435 187 aaKnown RBP5.93□□□□□ -1.46
SPG4YMR107W PEX14P53112 341 aa5.93□□□□□ -1.46
SPG4YMR107W DOS2P54858 310 aa5.93□□□□□ -1.46
SPG4YMR107W VPS30Q02948 557 aa5.93□□□□□ -1.46
SPG4YMR107W RBA50Q04418 439 aa5.93□□□□□ -1.46
SPG4YMR107W YML082WQ04533 649 aaKnown RBP5.93□□□□□ -1.46
SPG4YMR107W YCG1Q06680 1035 aa5.93□□□□□ -1.46
SPG4YMR107W NOP6Q07623 225 aaKnown RBP5.93□□□□□ -1.46
SPG4YMR107W PSK2Q08217 1101 aa5.93□□□□□ -1.46
SPG4YMR107W SDH5Q08230 162 aa5.93□□□□□ -1.46
SPG4YMR107W TFB4Q12004 338 aa5.93□□□□□ -1.46
SPG4YMR107W PGA3Q12746 312 aaKnown RBP5.93□□□□□ -1.46
SPG4YMR107W HSP82P02829 709 aaKnown RBP5.92□□□□□ -1.46
SPG4YMR107W PIF1P07271 859 aa5.92□□□□□ -1.46
SPG4YMR107W PYC1P11154 1178 aaKnown RBP5.92□□□□□ -1.46
SPG4YMR107W MRP7P12687 371 aa5.92□□□□□ -1.46
SPG4YMR107W KTR1P27810 393 aaKnown RBP5.92□□□□□ -1.46
SPG4YMR107W ISW1P38144 1129 aa5.92□□□□□ -1.46
SPG4YMR107W YHL017WP38745 532 aa5.92□□□□□ -1.46
SPG4YMR107W HXT10P43581 546 aa5.92□□□□□ -1.46
SPG4YMR107W ENT3P47160 408 aa5.92□□□□□ -1.46
SPG4YMR107W NNF2P53253 936 aa5.92□□□□□ -1.46
SPG4YMR107W NGL3Q03210 505 aa5.92□□□□□ -1.46
SPG4YMR107W VMS1Q04311 632 aaKnown RBP5.92□□□□□ -1.46
SPG4YMR107W ATG23Q06671 453 aa5.92□□□□□ -1.46
SPG4YMR107W CMS1Q07897 291 aaKnown RBP5.92□□□□□ -1.46
SPG4YMR107W SWI1P09547 1314 aa5.92□□□□□ -1.46
SPG4YMR107W RSF2P46974 1380 aa5.92□□□□□ -1.46
SPG4YMR107W GAL11P19659 1081 aa5.91□□□□□ -1.46
SPG4YMR107W PRE10P21242 288 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
SPG4YMR107W FBP26P32604 452 aa5.91□□□□□ -1.46
SPG4YMR107W YEL043WP32618 956 aa5.91□□□□□ -1.46
SPG4YMR107W MRX1P40050 688 aa5.91□□□□□ -1.46
SPG4YMR107W IAH1P41734 238 aa5.91□□□□□ -1.46
SPG4YMR107W PKH3Q03306 898 aaPredicted RBP5.91□□□□□ -1.46
SPG4YMR107W BRE1Q07457 700 aaKnown RBP5.91□□□□□ -1.46
SPG4YMR107W YRR1Q12172 810 aa5.91□□□□□ -1.46
SPG4YMR107W RGR1P19263 1082 aa5.9□□□□□ -1.46
SPG4YMR107W RAM1P22007 431 aa5.9□□□□□ -1.46
SPG4YMR107W ARG1P22768 420 aa5.9□□□□□ -1.46
SPG4YMR107W KCC4P25389 1037 aa5.9□□□□□ -1.46
SPG4YMR107W PUP2P32379 260 aa5.9□□□□□ -1.46
SPG4YMR107W ZUO1P32527 433 aaKnown RBP5.9□□□□□ -1.46
SPG4YMR107W YME2P32843 850 aa5.9□□□□□ -1.46
SPG4YMR107W SMF1P38925 575 aa5.9□□□□□ -1.46
SPG4YMR107W NUP42P49686 430 aaKnown RBP5.9□□□□□ -1.46
SPG4YMR107W GRX3Q03835 250 aa5.9□□□□□ -1.46
SPG4YMR107W UBX2Q04228 584 aa5.9□□□□□ -1.46
SPG4YMR107W VPS38Q05919 439 aa5.9□□□□□ -1.46
SPG4YMR107W OMS1Q06668 471 aa5.9□□□□□ -1.46
SPG4YMR107W TUM1Q08686 304 aaKnown RBP5.9□□□□□ -1.46
SPG4YMR107W RIB2Q12362 591 aaKnown RBP5.9□□□□□ -1.46
SPG4YMR107W YPR015CQ12531 247 aa5.9□□□□□ -1.46
SPG4YMR107W SAC3P46674 1301 aa5.9□□□□□ -1.47
SPG4YMR107W DPS1P04802 557 aaKnown RBP5.89□□□□□ -1.47
SPG4YMR107W ARD1P07347 238 aaPredicted RBP5.89□□□□□ -1.47
SPG4YMR107W RAD4P14736 754 aa5.89□□□□□ -1.47
SPG4YMR107W MRPS28P21771 286 aa5.89□□□□□ -1.47
SPG4YMR107W PAP1P29468 568 aaKnown RBP5.89□□□□□ -1.47
SPG4YMR107W SLD2P34252 453 aa5.89□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms