RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C MEC3Q02574 474 aa5.16□□□□□ -1.58
UBX4YMR067C GIC2Q06648 383 aa5.16□□□□□ -1.58
UBX4YMR067C SHU2P38957 223 aa5.15□□□□□ -1.59
UBX4YMR067C TRP3P00937 484 aa5.14□□□□□ -1.59
UBX4YMR067C SEC20P28791 383 aa5.14□□□□□ -1.59
UBX4YMR067C VPS35P34110 944 aa5.14□□□□□ -1.59
UBX4YMR067C TOS1P38288 455 aa5.14□□□□□ -1.59
UBX4YMR067C YGR130CP53278 816 aa5.14□□□□□ -1.59
UBX4YMR067C YCS4Q06156 1176 aa5.14□□□□□ -1.59
UBX4YMR067C MCM5P29496 775 aaKnown RBP5.13□□□□□ -1.59
UBX4YMR067C PUB1P32588 453 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59 RIP-Chip
UBX4YMR067C DOT1Q04089 582 aaKnown RBP5.13□□□□□ -1.59
UBX4YMR067C MSC6Q08818 692 aaKnown RBP5.13□□□□□ -1.59
UBX4YMR067C CYC7P00045 113 aa5.12□□□□□ -1.59
UBX4YMR067C PHO4P07270 312 aaKnown RBP5.12□□□□□ -1.59
UBX4YMR067C REI1P38344 393 aaPredicted RBP5.12□□□□□ -1.59
UBX4YMR067C MMM1P41800 426 aa5.12□□□□□ -1.59
UBX4YMR067C YOR059CQ08448 450 aaKnown RBP5.12□□□□□ -1.59
UBX4YMR067C KAR2P16474 682 aaKnown RBP5.11□□□□□ -1.59
UBX4YMR067C GPT2P36148 743 aa5.11□□□□□ -1.59
UBX4YMR067C CIT3P43635 486 aa5.11□□□□□ -1.59
UBX4YMR067C MON1P53129 644 aa5.11□□□□□ -1.59
UBX4YMR067C MAG2Q06436 670 aaKnown RBP5.11□□□□□ -1.59
UBX4YMR067C TY1A-LR4P0C2I8 440 aaKnown RBP5.1□□□□□ -1.59
UBX4YMR067C TY1A-DR6P0CX70 440 aa5.1□□□□□ -1.59
UBX4YMR067C TY1A-ER1P0CX71 440 aa5.1□□□□□ -1.59
UBX4YMR067C TY1A-LR2P0CX72 440 aa5.1□□□□□ -1.59
UBX4YMR067C TY1A-PLP0CX73 440 aa5.1□□□□□ -1.59
UBX4YMR067C TY1A-JR1P0CX74 440 aa5.1□□□□□ -1.59
UBX4YMR067C TY1A-LR3P0CX75 440 aa5.1□□□□□ -1.59
UBX4YMR067C TY1A-ML2P0CX76 440 aa5.1□□□□□ -1.59
UBX4YMR067C MET4P32389 672 aa5.1□□□□□ -1.59
UBX4YMR067C LIP5P32875 414 aa5.1□□□□□ -1.59
UBX4YMR067C YKL077WP36081 392 aa5.1□□□□□ -1.59
UBX4YMR067C NOG1Q02892 647 aaKnown RBP5.1□□□□□ -1.59
UBX4YMR067C BRE4Q07660 1125 aa5.1□□□□□ -1.59
UBX4YMR067C TY1A-GR1Q12085 440 aa5.1□□□□□ -1.59
UBX4YMR067C NSI1Q12457 570 aa5.1□□□□□ -1.59
UBX4YMR067C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.1□□□□□ -1.59
UBX4YMR067C TY1A-OLQ92392 440 aaKnown RBP5.1□□□□□ -1.59
UBX4YMR067C EXO5P38289 585 aa5.09□□□□□ -1.59
UBX4YMR067C PRP40P33203 583 aaKnown RBP5.08□□□□□ -1.6
UBX4YMR067C MSH4P40965 878 aaPredicted RBP5.08□□□□□ -1.6
UBX4YMR067C DAK2P43550 591 aa5.08□□□□□ -1.6
UBX4YMR067C CTH1P47976 325 aa5.08□□□□□ -1.6
UBX4YMR067C ALT1P52893 592 aa5.08□□□□□ -1.6
UBX4YMR067C OXR1Q08952 273 aa5.08□□□□□ -1.6
UBX4YMR067C WHI5Q12416 295 aa5.08□□□□□ -1.6
UBX4YMR067C SMY2P32909 740 aaKnown RBP5.07□□□□□ -1.6
UBX4YMR067C NNK1P36003 928 aa5.07□□□□□ -1.6
UBX4YMR067C MTR4P47047 1073 aaKnown RBP5.07□□□□□ -1.6
UBX4YMR067C AVO1Q08236 1176 aa5.07□□□□□ -1.6
UBX4YMR067C RPS4AP0CX35 261 aaKnown RBP5.06□□□□□ -1.6
UBX4YMR067C RPS4BP0CX36 261 aaKnown RBP5.06□□□□□ -1.6
UBX4YMR067C VMA4P22203 233 aaKnown RBP5.06□□□□□ -1.6
UBX4YMR067C SLD2P34252 453 aa5.06□□□□□ -1.6
UBX4YMR067C WHI3P34761 661 aaKnown RBP5.06□□□□□ -1.6
UBX4YMR067C SEN54Q02825 467 aaPredicted RBP5.06□□□□□ -1.6
UBX4YMR067C ALG6Q12001 544 aaKnown RBP5.06□□□□□ -1.6
UBX4YMR067C MSH3P25336 1018 aa5.05□□□□□ -1.6
UBX4YMR067C THI12P42883 340 aa5.05□□□□□ -1.6
UBX4YMR067C THI5P43534 340 aa5.05□□□□□ -1.6
UBX4YMR067C RSM26P47141 266 aa5.05□□□□□ -1.6
UBX4YMR067C THI11P47183 340 aa5.05□□□□□ -1.6
UBX4YMR067C YGR045CP53229 120 aa5.05□□□□□ -1.6
UBX4YMR067C RCM1P53972 490 aa5.05□□□□□ -1.6
UBX4YMR067C ULP1Q02724 621 aa5.05□□□□□ -1.6
UBX4YMR067C DAL4Q04895 635 aa5.05□□□□□ -1.6
UBX4YMR067C THI13Q07748 340 aa5.05□□□□□ -1.6
UBX4YMR067C SQT1P35184 431 aa5.04□□□□□ -1.6
UBX4YMR067C NEM1P38757 446 aa5.04□□□□□ -1.6
UBX4YMR067C OYE3P41816 400 aaPredicted RBP5.04□□□□□ -1.6
UBX4YMR067C ELA1P53861 379 aaPredicted RBP5.04□□□□□ -1.6
UBX4YMR067C GCD1P09032 578 aaPredicted RBP5.03□□□□□ -1.6
UBX4YMR067C NFS1P25374 497 aa5.03□□□□□ -1.6
UBX4YMR067C HSE1P38753 452 aa5.03□□□□□ -1.6
UBX4YMR067C IPL1P38991 367 aa5.03□□□□□ -1.6
UBX4YMR067C YAR028WP39548 234 aa5.03□□□□□ -1.6
UBX4YMR067C SLS1P42900 643 aa5.03□□□□□ -1.6
UBX4YMR067C YPL109CQ02981 657 aa5.03□□□□□ -1.6
UBX4YMR067C UTP5Q04177 643 aaKnown RBP5.03□□□□□ -1.6
UBX4YMR067C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61 RIP-Chip
UBX4YMR067C ATG14P38270 344 aa5.02□□□□□ -1.61
UBX4YMR067C SDH1Q00711 640 aa5.02□□□□□ -1.61
UBX4YMR067C ADI1Q03677 179 aa5.02□□□□□ -1.61
UBX4YMR067C RKM2Q03942 479 aa5.02□□□□□ -1.61
UBX4YMR067C AOS1Q06624 347 aa5.02□□□□□ -1.61
UBX4YMR067C LAP2Q10740 671 aa5.02□□□□□ -1.61
UBX4YMR067C YVC1Q12324 675 aa5.02□□□□□ -1.61
UBX4YMR067C HXK1P04806 485 aaKnown RBP5.01□□□□□ -1.61
UBX4YMR067C TAF13P11747 167 aa5.01□□□□□ -1.61
UBX4YMR067C ELM1P32801 640 aa5.01□□□□□ -1.61
UBX4YMR067C UGA4P32837 571 aa5.01□□□□□ -1.61
UBX4YMR067C RPT1P33299 467 aaKnown RBP5.01□□□□□ -1.61
UBX4YMR067C PEX28P38848 579 aa5.01□□□□□ -1.61
UBX4YMR067C IRC24P40580 263 aa5.01□□□□□ -1.61
UBX4YMR067C PEX13P80667 386 aa5.01□□□□□ -1.61
UBX4YMR067C SEC23P15303 768 aaKnown RBP5□□□□□ -1.61
UBX4YMR067C RDH54P38086 958 aa5□□□□□ -1.61
UBX4YMR067C XKS1P42826 600 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms