RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W IRS4P36115 615 aaKnown RBP3.43□□□□□ -1.86
PRP39YML046W ETP1P38748 585 aaKnown RBP3.43□□□□□ -1.86
PRP39YML046W PSY2P40164 858 aa3.43□□□□□ -1.86
PRP39YML046W YPL277CQ08989 487 aa3.43□□□□□ -1.86
PRP39YML046W RPS13P05756 151 aaKnown RBP3.43□□□□□ -1.86
PRP39YML046W CTS1P29029 562 aa3.43□□□□□ -1.86
PRP39YML046W KTR2P33550 425 aa3.43□□□□□ -1.86
PRP39YML046W SHM2P37291 469 aaKnown RBP3.43□□□□□ -1.86
PRP39YML046W SRS2P12954 1174 aa3.42□□□□□ -1.86
PRP39YML046W GTS1P40956 396 aa3.41□□□□□ -1.86
PRP39YML046W YLR358CO13565 187 aa3.41□□□□□ -1.86
PRP39YML046W SMC1P32908 1225 aa3.41□□□□□ -1.86
PRP39YML046W ALG6Q12001 544 aaKnown RBP3.41□□□□□ -1.86
PRP39YML046W SMY2P32909 740 aaKnown RBP3.4□□□□□ -1.87
PRP39YML046W TTI1P36097 1038 aa3.4□□□□□ -1.87
PRP39YML046W SNO2P53823 222 aa3.4□□□□□ -1.87
PRP39YML046W MEC3Q02574 474 aa3.4□□□□□ -1.87
PRP39YML046W APC11Q12157 165 aa3.4□□□□□ -1.87
PRP39YML046W REI1P38344 393 aaPredicted RBP3.39□□□□□ -1.87
PRP39YML046W HTS1P07263 546 aaKnown RBP3.39□□□□□ -1.87
PRP39YML046W FOL2P51601 243 aaKnown RBP3.39□□□□□ -1.87
PRP39YML046W RPB10P22139 70 aa3.38□□□□□ -1.87
PRP39YML046W RRN6P32786 894 aa3.38□□□□□ -1.87
PRP39YML046W PRE10P21242 288 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
PRP39YML046W NNK1P36003 928 aa3.37□□□□□ -1.87
PRP39YML046W UTP22P53254 1237 aaPredicted RBP3.37□□□□□ -1.87
PRP39YML046W ELA1P53861 379 aaPredicted RBP3.37□□□□□ -1.87
PRP39YML046W YML122CQ03207 126 aa3.36□□□□□ -1.87
PRP39YML046W NPR1P22211 790 aa3.35□□□□□ -1.87
PRP39YML046W MPT5P39016 859 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87 RIP-Chip
PRP39YML046W YGR045CP53229 120 aa3.35□□□□□ -1.87
PRP39YML046W CTR9P89105 1077 aa3.35□□□□□ -1.87
PRP39YML046W AVO1Q08236 1176 aa3.35□□□□□ -1.87
PRP39YML046W CMR1Q12510 522 aaKnown RBP3.35□□□□□ -1.87
PRP39YML046W RIM11P38615 370 aa3.34□□□□□ -1.87
PRP39YML046W TAT2P38967 592 aa3.34□□□□□ -1.87
PRP39YML046W TPP1Q03796 238 aa3.34□□□□□ -1.87
PRP39YML046W PUS7Q08647 676 aaKnown RBP3.34□□□□□ -1.87
PRP39YML046W PUS9Q12069 462 aa3.34□□□□□ -1.87
PRP39YML046W CWC15Q03772 175 aaKnown RBP3.33□□□□□ -1.88
PRP39YML046W PUP1P25043 261 aa3.33□□□□□ -1.88
PRP39YML046W ECM2P38241 364 aaKnown RBP3.33□□□□□ -1.88
PRP39YML046W PNP1Q05788 311 aa3.33□□□□□ -1.88
PRP39YML046W COBP00163 385 aa3.32□□□□□ -1.88
PRP39YML046W TRM2P33753 639 aa3.32□□□□□ -1.88
PRP39YML046W PRP5P21372 849 aaPredicted RBP3.31□□□□□ -1.88
PRP39YML046W CPS1P27614 576 aa3.31□□□□□ -1.88
PRP39YML046W YHL012WP38709 493 aa3.31□□□□□ -1.88
PRP39YML046W SPT20P50875 604 aa3.31□□□□□ -1.88
PRP39YML046W YOR352WQ08816 343 aa3.31□□□□□ -1.88
PRP39YML046W MSE1P48525 536 aa3.3□□□□□ -1.88
PRP39YML046W YDR132CQ03900 495 aa3.3□□□□□ -1.88
PRP39YML046W LSO1Q3E827 93 aa3.3□□□□□ -1.88
PRP39YML046W ARL1P38116 183 aaKnown RBP3.3□□□□□ -1.88
PRP39YML046W SAM35P14693 329 aa3.29□□□□□ -1.88
PRP39YML046W MDL2P33311 773 aa3.29□□□□□ -1.88
PRP39YML046W AIM26P32858 118 aa3.28□□□□□ -1.88
PRP39YML046W SLI1P53304 468 aa3.28□□□□□ -1.88
PRP39YML046W DUR3P33413 735 aa3.27□□□□□ -1.89
PRP39YML046W TY1A-LR4P0C2I8 440 aaKnown RBP3.26□□□□□ -1.89
PRP39YML046W TY1A-DR6P0CX70 440 aa3.26□□□□□ -1.89
PRP39YML046W TY1A-ER1P0CX71 440 aa3.26□□□□□ -1.89
PRP39YML046W TY1A-LR2P0CX72 440 aa3.26□□□□□ -1.89
PRP39YML046W TY1A-PLP0CX73 440 aa3.26□□□□□ -1.89
PRP39YML046W TY1A-JR1P0CX74 440 aa3.26□□□□□ -1.89
PRP39YML046W TY1A-LR3P0CX75 440 aa3.26□□□□□ -1.89
PRP39YML046W TY1A-ML2P0CX76 440 aa3.26□□□□□ -1.89
PRP39YML046W ENV11P53246 860 aa3.26□□□□□ -1.89
PRP39YML046W GCN5Q03330 439 aa3.26□□□□□ -1.89
PRP39YML046W TY1A-GR1Q12085 440 aa3.26□□□□□ -1.89
PRP39YML046W RQC2Q12532 1038 aaKnown RBP3.26□□□□□ -1.89
PRP39YML046W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.26□□□□□ -1.89
PRP39YML046W TY1A-OLQ92392 440 aaKnown RBP3.26□□□□□ -1.89
PRP39YML046W FUR4P05316 633 aaKnown RBP3.26□□□□□ -1.89
PRP39YML046W SGD1Q06132 899 aa3.26□□□□□ -1.89
PRP39YML046W YLR257WQ06146 321 aaKnown RBP3.26□□□□□ -1.89
PRP39YML046W NMD3P38861 518 aaKnown RBP3.25□□□□□ -1.89
PRP39YML046W MEF2P39677 819 aa3.25□□□□□ -1.89
PRP39YML046W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
PRP39YML046W HRK1Q08732 759 aaKnown RBP3.25□□□□□ -1.89
PRP39YML046W RAD53P22216 821 aa3.24□□□□□ -1.89
PRP39YML046W HCM1P25364 564 aa3.24□□□□□ -1.89
PRP39YML046W SRO9P25567 434 aaKnown RBP3.24□□□□□ -1.89
PRP39YML046W LAM1P38851 1228 aa3.24□□□□□ -1.89
PRP39YML046W YAR028WP39548 234 aa3.24□□□□□ -1.89
PRP39YML046W SAP155P43612 1002 aa3.24□□□□□ -1.89
PRP39YML046W SUN4P53616 420 aa3.24□□□□□ -1.89
PRP39YML046W CTF4Q01454 927 aa3.24□□□□□ -1.89
PRP39YML046W RSC4Q02206 625 aa3.24□□□□□ -1.89
PRP39YML046W URN1Q06525 465 aaKnown RBP3.24□□□□□ -1.89
PRP39YML046W PMT7Q06644 662 aa3.24□□□□□ -1.89
PRP39YML046W SPS1P08458 490 aa3.23□□□□□ -1.89
PRP39YML046W RET1P22276 1149 aaKnown RBP3.23□□□□□ -1.89
PRP39YML046W PUF4P25339 888 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89 RIP-Chip
PRP39YML046W AIM21P40563 679 aa3.23□□□□□ -1.89
PRP39YML046W YKL077WP36081 392 aa3.22□□□□□ -1.89
PRP39YML046W YAF9P53930 226 aa3.22□□□□□ -1.89
PRP39YML046W YML083CQ04526 418 aa3.22□□□□□ -1.89
PRP39YML046W HSE1P38753 452 aa3.22□□□□□ -1.89
PRP39YML046W NBA1Q08229 501 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 138.7 ms