RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C RNQ1P25367 405 aa5.76□□□□□ -1.49
RPN13YLR421C SEG2P34250 1132 aa5.76□□□□□ -1.49
RPN13YLR421C REI1P38344 393 aaPredicted RBP5.76□□□□□ -1.49
RPN13YLR421C RCM1P53972 490 aa5.76□□□□□ -1.49
RPN13YLR421C MEC3Q02574 474 aa5.76□□□□□ -1.49
RPN13YLR421C NSI1Q12457 570 aa5.76□□□□□ -1.49
RPN13YLR421C RPS4AP0CX35 261 aaKnown RBP5.75□□□□□ -1.49
RPN13YLR421C RPS4BP0CX36 261 aaKnown RBP5.75□□□□□ -1.49
RPN13YLR421C ERP5P38819 212 aa5.75□□□□□ -1.49
RPN13YLR421C INP54Q08227 384 aaKnown RBP5.75□□□□□ -1.49
RPN13YLR421C MSH4P40965 878 aaPredicted RBP5.74□□□□□ -1.49
RPN13YLR421C NUT1P53114 1132 aa5.74□□□□□ -1.49
RPN13YLR421C MON1P53129 644 aa5.74□□□□□ -1.49
RPN13YLR421C YBL113CQ7M4S9 792 aa5.74□□□□□ -1.49
RPN13YLR421C CDC3P32457 520 aaKnown RBP5.73□□□□□ -1.49
RPN13YLR421C MDJ2P42834 146 aa5.73□□□□□ -1.49
RPN13YLR421C SAP155P43612 1002 aa5.73□□□□□ -1.49
RPN13YLR421C YAF9P53930 226 aa5.73□□□□□ -1.49
RPN13YLR421C EAR1Q03212 550 aa5.73□□□□□ -1.49
RPN13YLR421C YOR059CQ08448 450 aaKnown RBP5.73□□□□□ -1.49
RPN13YLR421C DFG16Q99234 619 aa5.73□□□□□ -1.49
RPN13YLR421C FRT1Q99332 602 aa5.73□□□□□ -1.49
RPN13YLR421C TY1A-LR4P0C2I8 440 aaKnown RBP5.72□□□□□ -1.49
RPN13YLR421C TY1A-DR6P0CX70 440 aa5.72□□□□□ -1.49
RPN13YLR421C TY1A-ER1P0CX71 440 aa5.72□□□□□ -1.49
RPN13YLR421C TY1A-LR2P0CX72 440 aa5.72□□□□□ -1.49
RPN13YLR421C TY1A-PLP0CX73 440 aa5.72□□□□□ -1.49
RPN13YLR421C TY1A-JR1P0CX74 440 aa5.72□□□□□ -1.49
RPN13YLR421C TY1A-LR3P0CX75 440 aa5.72□□□□□ -1.49
RPN13YLR421C TY1A-ML2P0CX76 440 aa5.72□□□□□ -1.49
RPN13YLR421C MCM5P29496 775 aaKnown RBP5.72□□□□□ -1.49
RPN13YLR421C OYE3P41816 400 aaPredicted RBP5.72□□□□□ -1.49
RPN13YLR421C PMT7Q06644 662 aa5.72□□□□□ -1.49
RPN13YLR421C GPI13Q07830 1017 aa5.72□□□□□ -1.49
RPN13YLR421C TY1A-GR1Q12085 440 aa5.72□□□□□ -1.49
RPN13YLR421C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.72□□□□□ -1.49
RPN13YLR421C TY1A-OLQ92392 440 aaKnown RBP5.72□□□□□ -1.49
RPN13YLR421C HSP78P33416 811 aa5.71□□□□□ -1.5
RPN13YLR421C YGR045CP53229 120 aa5.71□□□□□ -1.5
RPN13YLR421C ELA1P53861 379 aaPredicted RBP5.71□□□□□ -1.5
RPN13YLR421C HAT1Q12341 374 aa5.71□□□□□ -1.5
RPN13YLR421C UBP5P39944 805 aa5.7□□□□□ -1.5
RPN13YLR421C ECL1P48235 211 aa5.7□□□□□ -1.5
RPN13YLR421C ALT1P52893 592 aa5.7□□□□□ -1.5
RPN13YLR421C NUT2Q06213 157 aa5.7□□□□□ -1.5
RPN13YLR421C NOC3Q07896 663 aaPredicted RBP5.69□□□□□ -1.5
RPN13YLR421C AVO1Q08236 1176 aa5.69□□□□□ -1.5
RPN13YLR421C NFS1P25374 497 aa5.68□□□□□ -1.5
RPN13YLR421C YVC1Q12324 675 aa5.68□□□□□ -1.5
RPN13YLR421C GAS1P22146 559 aaKnown RBP5.67□□□□□ -1.5
RPN13YLR421C ADP1P25371 1049 aa5.67□□□□□ -1.5
RPN13YLR421C YKL077WP36081 392 aa5.67□□□□□ -1.5
RPN13YLR421C GEF1P37020 779 aa5.67□□□□□ -1.5
RPN13YLR421C RVS167P39743 482 aaKnown RBP5.67□□□□□ -1.5
RPN13YLR421C SSY1Q03770 852 aa5.67□□□□□ -1.5
RPN13YLR421C TRE1Q08919 783 aa5.67□□□□□ -1.5
RPN13YLR421C SMY2P32909 740 aaKnown RBP5.66□□□□□ -1.5
RPN13YLR421C SLS1P42900 643 aa5.66□□□□□ -1.5
RPN13YLR421C PRO1P32264 428 aa5.65□□□□□ -1.5
RPN13YLR421C ARL1P38116 183 aaKnown RBP5.65□□□□□ -1.5
RPN13YLR421C EXO5P38289 585 aa5.65□□□□□ -1.5
RPN13YLR421C NIT1P40447 199 aa5.65□□□□□ -1.5
RPN13YLR421C SAM37P50110 327 aa5.65□□□□□ -1.5
RPN13YLR421C NNK1P36003 928 aa5.64□□□□□ -1.51
RPN13YLR421C NEM1P38757 446 aa5.64□□□□□ -1.51
RPN13YLR421C PEX7P39108 375 aa5.64□□□□□ -1.51
RPN13YLR421C PRP43P53131 767 aaKnown RBP5.64□□□□□ -1.51
RPN13YLR421C YCS4Q06156 1176 aa5.63□□□□□ -1.51
RPN13YLR421C CIC1P38779 376 aaKnown RBP5.62□□□□□ -1.51
RPN13YLR421C PTC7P38797 343 aa5.62□□□□□ -1.51
RPN13YLR421C NMD3P38861 518 aaKnown RBP5.62□□□□□ -1.51
RPN13YLR421C SHU2P38957 223 aa5.62□□□□□ -1.51
RPN13YLR421C GTS1P40956 396 aa5.61□□□□□ -1.51
RPN13YLR421C TPP1Q03796 238 aa5.61□□□□□ -1.51
RPN13YLR421C CDA2Q06703 312 aa5.61□□□□□ -1.51
RPN13YLR421C PUS7Q08647 676 aaKnown RBP5.61□□□□□ -1.51
RPN13YLR421C LPX1Q12405 387 aaKnown RBP5.61□□□□□ -1.51
RPN13YLR421C YHL050CP38721 697 aa5.6□□□□□ -1.51
RPN13YLR421C YHR219WP38900 624 aa5.6□□□□□ -1.51
RPN13YLR421C YAR028WP39548 234 aa5.6□□□□□ -1.51
RPN13YLR421C UGA4P32837 571 aa5.59□□□□□ -1.51
RPN13YLR421C TSA1P34760 196 aaKnown RBP5.59□□□□□ -1.51
RPN13YLR421C MTR4P47047 1073 aaKnown RBP5.59□□□□□ -1.51
RPN13YLR421C ORC3P54790 616 aa5.59□□□□□ -1.51
RPN13YLR421C PEX13P80667 386 aa5.59□□□□□ -1.51
RPN13YLR421C NOG1Q02892 647 aaKnown RBP5.59□□□□□ -1.51
RPN13YLR421C MSH3P25336 1018 aa5.58□□□□□ -1.52
RPN13YLR421C YLR257WQ06146 321 aaKnown RBP5.58□□□□□ -1.52
RPN13YLR421C RET1P22276 1149 aaKnown RBP5.57□□□□□ -1.52
RPN13YLR421C PRP40P33203 583 aaKnown RBP5.57□□□□□ -1.52
RPN13YLR421C RSM26P47141 266 aa5.57□□□□□ -1.52
RPN13YLR421C YNR063WP53749 607 aa5.57□□□□□ -1.52
RPN13YLR421C UTP5Q04177 643 aaKnown RBP5.57□□□□□ -1.52
RPN13YLR421C DAL4Q04895 635 aa5.57□□□□□ -1.52
RPN13YLR421C XKS1P42826 600 aa5.56□□□□□ -1.52
RPN13YLR421C YKL222CP35995 705 aa5.55□□□□□ -1.52
RPN13YLR421C PHO4P07270 312 aaKnown RBP5.54□□□□□ -1.52
RPN13YLR421C GCD6P32501 712 aaKnown RBP5.54□□□□□ -1.52
RPN13YLR421C SQT1P35184 431 aa5.54□□□□□ -1.52
RPN13YLR421C ATG14P38270 344 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms