RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeast

Gene BER1, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BER1	YLR412W	MON1	P53129	644 aa		5.03	□□□□□ -1.6
BER1	YLR412W	IPL1	P38991	367 aa		5.02	□□□□□ -1.61
BER1	YLR412W	AKR1	P39010	764 aa		5.02	□□□□□ -1.61
BER1	YLR412W	WHI5	Q12416	295 aa		5.02	□□□□□ -1.61
BER1	YLR412W	HTS1	P07263	546 aa	Known RBP	5.01	□□□□□ -1.61
BER1	YLR412W	PRP5	P21372	849 aa	Predicted RBP	5.01	□□□□□ -1.61
BER1	YLR412W	YCR015C	P25616	317 aa		5.01	□□□□□ -1.61
BER1	YLR412W	MET4	P32389	672 aa		5.01	□□□□□ -1.61
BER1	YLR412W	CIC1	P38779	376 aa	Known RBP	5.01	□□□□□ -1.61
BER1	YLR412W	KIP3	P53086	805 aa	Known RBP	5.01	□□□□□ -1.61
BER1	YLR412W	NCE103	P53615	221 aa		5.01	□□□□□ -1.61
BER1	YLR412W	FAR11	P53917	953 aa		5.01	□□□□□ -1.61
BER1	YLR412W	SEN54	Q02825	467 aa	Predicted RBP	5.01	□□□□□ -1.61
BER1	YLR412W	PMT7	Q06644	662 aa		5.01	□□□□□ -1.61
BER1	YLR412W	PHO4	P07270	312 aa	Known RBP	5	□□□□□ -1.61
BER1	YLR412W	SEC20	P28791	383 aa		5	□□□□□ -1.61
BER1	YLR412W	MCM5	P29496	775 aa	Known RBP	5	□□□□□ -1.61
BER1	YLR412W	RVS167	P39743	482 aa	Known RBP	5	□□□□□ -1.61
BER1	YLR412W	SAP155	P43612	1002 aa		5	□□□□□ -1.61
BER1	YLR412W	YAF9	P53930	226 aa		5	□□□□□ -1.61
BER1	YLR412W	YML020W	Q03722	664 aa		5	□□□□□ -1.61
BER1	YLR412W	YMR074C	Q04773	145 aa		5	□□□□□ -1.61
BER1	YLR412W	YCS4	Q06156	1176 aa		5	□□□□□ -1.61
BER1	YLR412W	VPS35	P34110	944 aa		4.99	□□□□□ -1.61
BER1	YLR412W	SLD2	P34252	453 aa		4.99	□□□□□ -1.61
BER1	YLR412W	MSB1	P21339	1137 aa	Known RBP	4.98	□□□□□ -1.61
BER1	YLR412W	GCD6	P32501	712 aa	Known RBP	4.98	□□□□□ -1.61
BER1	YLR412W	NIT1	P40447	199 aa		4.98	□□□□□ -1.61
BER1	YLR412W	DAK2	P43550	591 aa		4.98	□□□□□ -1.61
BER1	YLR412W	YIG1	Q08956	461 aa		4.98	□□□□□ -1.61
BER1	YLR412W	SEG2	P34250	1132 aa		4.97	□□□□□ -1.61
BER1	YLR412W	UTP22	P53254	1237 aa	Predicted RBP	4.97	□□□□□ -1.61
BER1	YLR412W	YOR223W	Q12015	292 aa		4.97	□□□□□ -1.61
BER1	YLR412W	YLL054C	Q12244	843 aa		4.97	□□□□□ -1.61
BER1	YLR412W	PRP40	P33203	583 aa	Known RBP	4.96	□□□□□ -1.62
BER1	YLR412W	GCV1	P48015	400 aa		4.96	□□□□□ -1.62
BER1	YLR412W	DAL4	Q04895	635 aa		4.96	□□□□□ -1.62
BER1	YLR412W	TOS4	Q06266	489 aa		4.96	□□□□□ -1.62
BER1	YLR412W	GIC2	Q06648	383 aa		4.96	□□□□□ -1.62
BER1	YLR412W	UGA4	P32837	571 aa		4.95	□□□□□ -1.62
BER1	YLR412W	LRG1	P35688	1017 aa		4.95	□□□□□ -1.62
BER1	YLR412W	SEA4	P38164	1038 aa		4.95	□□□□□ -1.62
BER1	YLR412W	MEC3	Q02574	474 aa		4.95	□□□□□ -1.62
BER1	YLR412W	GIS1	Q03833	894 aa		4.95	□□□□□ -1.62
BER1	YLR412W	OXR1	Q08952	273 aa		4.95	□□□□□ -1.62
BER1	YLR412W	ALG6	Q12001	544 aa	Known RBP	4.95	□□□□□ -1.62
BER1	YLR412W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.94	□□□□□ -1.62
BER1	YLR412W	TY1A-DR6	P0CX70	440 aa		4.94	□□□□□ -1.62
BER1	YLR412W	TY1A-ER1	P0CX71	440 aa		4.94	□□□□□ -1.62
BER1	YLR412W	TY1A-LR2	P0CX72	440 aa		4.94	□□□□□ -1.62
BER1	YLR412W	TY1A-PL	P0CX73	440 aa		4.94	□□□□□ -1.62
BER1	YLR412W	TY1A-JR1	P0CX74	440 aa		4.94	□□□□□ -1.62
BER1	YLR412W	TY1A-LR3	P0CX75	440 aa		4.94	□□□□□ -1.62
BER1	YLR412W	TY1A-ML2	P0CX76	440 aa		4.94	□□□□□ -1.62
BER1	YLR412W	RPT1	P33299	467 aa	Known RBP	4.94	□□□□□ -1.62
BER1	YLR412W	YKL222C	P35995	705 aa		4.94	□□□□□ -1.62
BER1	YLR412W	YKL077W	P36081	392 aa		4.94	□□□□□ -1.62
BER1	YLR412W	GPT2	P36148	743 aa		4.94	□□□□□ -1.62
BER1	YLR412W	REI1	P38344	393 aa	Predicted RBP	4.94	□□□□□ -1.62
BER1	YLR412W	ECL1	P48235	211 aa		4.94	□□□□□ -1.62
BER1	YLR412W	DOT1	Q04089	582 aa	Known RBP	4.94	□□□□□ -1.62
BER1	YLR412W	NOP8	Q08287	484 aa	Predicted RBP	4.94	□□□□□ -1.62
BER1	YLR412W	TY1A-GR1	Q12085	440 aa		4.94	□□□□□ -1.62
BER1	YLR412W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.94	□□□□□ -1.62
BER1	YLR412W	TY1A-OL	Q92392	440 aa	Known RBP	4.94	□□□□□ -1.62
BER1	YLR412W	EXO5	P38289	585 aa		4.93	□□□□□ -1.62
BER1	YLR412W	KAR2	P16474	682 aa	Known RBP	4.92	□□□□□ -1.62
BER1	YLR412W	SHU2	P38957	223 aa		4.92	□□□□□ -1.62
BER1	YLR412W	PEX13	P80667	386 aa		4.92	□□□□□ -1.62
BER1	YLR412W	ULP1	Q02724	621 aa		4.92	□□□□□ -1.62
BER1	YLR412W	FAA3	P39002	694 aa		4.91	□□□□□ -1.62
BER1	YLR412W	SLS1	P42900	643 aa		4.91	□□□□□ -1.62
BER1	YLR412W	RSM26	P47141	266 aa		4.91	□□□□□ -1.62
BER1	YLR412W	NOG1	Q02892	647 aa	Known RBP	4.91	□□□□□ -1.62
BER1	YLR412W	MSH3	P25336	1018 aa		4.9	□□□□□ -1.63
BER1	YLR412W	SQT1	P35184	431 aa		4.9	□□□□□ -1.63
BER1	YLR412W	MMM1	P41800	426 aa		4.9	□□□□□ -1.63
BER1	YLR412W	POL32	P47110	350 aa		4.9	□□□□□ -1.63
BER1	YLR412W	ESC8	Q08119	714 aa		4.9	□□□□□ -1.63
BER1	YLR412W	ATE1	P16639	503 aa		4.89	□□□□□ -1.63
BER1	YLR412W	WHI3	P34761	661 aa	Known RBP	4.89	□□□□□ -1.63
BER1	YLR412W	ARL1	P38116	183 aa	Known RBP	4.89	□□□□□ -1.63
BER1	YLR412W	POL12	P38121	705 aa	Predicted RBP	4.89	□□□□□ -1.63
BER1	YLR412W	NEM1	P38757	446 aa		4.89	□□□□□ -1.63
BER1	YLR412W	YGR045C	P53229	120 aa		4.89	□□□□□ -1.63
BER1	YLR412W	ELA1	P53861	379 aa	Predicted RBP	4.89	□□□□□ -1.63
BER1	YLR412W	SDH1	Q00711	640 aa		4.89	□□□□□ -1.63
BER1	YLR412W	YPL109C	Q02981	657 aa		4.89	□□□□□ -1.63
BER1	YLR412W	AVO1	Q08236	1176 aa		4.89	□□□□□ -1.63
BER1	YLR412W	HXK1	P04806	485 aa	Known RBP	4.88	□□□□□ -1.63
BER1	YLR412W	HEM3	P28789	327 aa		4.88	□□□□□ -1.63
BER1	YLR412W	PEX28	P38848	579 aa		4.88	□□□□□ -1.63
BER1	YLR412W	MSH4	P40965	878 aa	Predicted RBP	4.88	□□□□□ -1.63
BER1	YLR412W	CIT3	P43635	486 aa		4.88	□□□□□ -1.63
BER1	YLR412W	MTR4	P47047	1073 aa	Known RBP	4.88	□□□□□ -1.63
BER1	YLR412W	ADI1	Q03677	179 aa		4.88	□□□□□ -1.63
BER1	YLR412W	DFG16	Q99234	619 aa		4.88	□□□□□ -1.63
BER1	YLR412W	RPS4A	P0CX35	261 aa	Known RBP	4.87	□□□□□ -1.63
BER1	YLR412W	RPS4B	P0CX36	261 aa	Known RBP	4.87	□□□□□ -1.63
BER1	YLR412W	MGE1	P38523	228 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms