RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C RRP9Q06506 573 aaKnown RBP6.77□□□□□ -1.32
SKI2YLR398C SLP1Q12232 587 aa6.77□□□□□ -1.32
SKI2YLR398C SNT1P25357 1226 aa6.77□□□□□ -1.33
SKI2YLR398C SWC5P38326 303 aa6.77□□□□□ -1.33
SKI2YLR398C HIS4P00815 799 aaKnown RBP6.77□□□□□ -1.33
SKI2YLR398C DNM1P54861 757 aa6.77□□□□□ -1.33
SKI2YLR398C MMT1Q03218 510 aa6.77□□□□□ -1.33
SKI2YLR398C NSE3Q05541 303 aa6.77□□□□□ -1.33
SKI2YLR398C COG4Q06096 861 aa6.77□□□□□ -1.33
SKI2YLR398C SPO75Q07798 868 aa6.77□□□□□ -1.33
SKI2YLR398C SBP1P10080 294 aaKnown RBP6.76□□□□□ -1.33
SKI2YLR398C RPO26P20435 155 aa6.76□□□□□ -1.33
SKI2YLR398C PSO2P30620 661 aa6.76□□□□□ -1.33
SKI2YLR398C YTA6P40328 754 aa6.76□□□□□ -1.33
SKI2YLR398C SUP35P05453 685 aaKnown RBP6.76□□□□□ -1.33
SKI2YLR398C CAF130P53280 1122 aaPredicted RBP6.76□□□□□ -1.33
SKI2YLR398C UTP5Q04177 643 aaKnown RBP6.76□□□□□ -1.33
SKI2YLR398C HFD1Q04458 532 aa6.76□□□□□ -1.33
SKI2YLR398C RRP46P53256 223 aaPredicted RBP6.76□□□□□ -1.33
SKI2YLR398C CMS1Q07897 291 aaKnown RBP6.76□□□□□ -1.33
SKI2YLR398C ECM4P36156 370 aa6.76□□□□□ -1.33
SKI2YLR398C APL6P46682 809 aa6.76□□□□□ -1.33
SKI2YLR398C TUF1P02992 437 aaKnown RBP6.75□□□□□ -1.33
SKI2YLR398C RPC25P35718 212 aa6.75□□□□□ -1.33
SKI2YLR398C VPS75P53853 264 aa6.75□□□□□ -1.33
SKI2YLR398C YLR125WQ12138 136 aa6.75□□□□□ -1.33
SKI2YLR398C RPL24AP04449 155 aaKnown RBP6.75□□□□□ -1.33
SKI2YLR398C RAD24P32641 659 aa6.75□□□□□ -1.33
SKI2YLR398C ATP25Q03153 612 aa6.75□□□□□ -1.33
SKI2YLR398C RIM20Q12033 661 aa6.75□□□□□ -1.33
SKI2YLR398C MSS116P15424 664 aaKnown RBP6.75□□□□□ -1.33
SKI2YLR398C OM45P16547 393 aa6.75□□□□□ -1.33
SKI2YLR398C YRB1P41920 201 aaKnown RBP6.75□□□□□ -1.33
SKI2YLR398C UME1Q03010 460 aa6.75□□□□□ -1.33
SKI2YLR398C ARO80Q04052 950 aa6.75□□□□□ -1.33
SKI2YLR398C TRS120Q04183 1289 aa6.75□□□□□ -1.33
SKI2YLR398C YMR111CQ04461 462 aaPredicted RBP6.75□□□□□ -1.33
SKI2YLR398C ARP9Q05123 467 aa6.75□□□□□ -1.33
SKI2YLR398C VPS38Q05919 439 aa6.75□□□□□ -1.33
SKI2YLR398C IES3Q12345 250 aa6.75□□□□□ -1.33
SKI2YLR398C NUP188P52593 1655 aaKnown RBP6.74□□□□□ -1.33
SKI2YLR398C MRPS28P21771 286 aa6.74□□□□□ -1.33
SKI2YLR398C KES1P35844 434 aaKnown RBP6.74□□□□□ -1.33
SKI2YLR398C TPS3P38426 1054 aaKnown RBP6.74□□□□□ -1.33
SKI2YLR398C YAP3P38749 330 aa6.74□□□□□ -1.33
SKI2YLR398C FIN1Q03898 291 aa6.74□□□□□ -1.33
SKI2YLR398C RAD51P25454 400 aa6.74□□□□□ -1.33
SKI2YLR398C MEI5P32489 222 aa6.74□□□□□ -1.33
SKI2YLR398C SMC2P38989 1170 aaKnown RBP6.74□□□□□ -1.33
SKI2YLR398C YMR147WP40218 223 aaKnown RBP6.74□□□□□ -1.33
SKI2YLR398C MFM1Q02783 413 aa6.74□□□□□ -1.33
SKI2YLR398C MRP7P12687 371 aa6.74□□□□□ -1.33
SKI2YLR398C SSF1P38789 453 aaPredicted RBP6.74□□□□□ -1.33
SKI2YLR398C MTC5Q03897 1148 aa6.74□□□□□ -1.33
SKI2YLR398C PFK2P16862 959 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
SKI2YLR398C YKT6P36015 200 aaKnown RBP6.73□□□□□ -1.33
SKI2YLR398C TYS1P36421 394 aaKnown RBP6.73□□□□□ -1.33
SKI2YLR398C RTS1P38903 757 aa6.73□□□□□ -1.33
SKI2YLR398C SSP120P39931 234 aaKnown RBP6.73□□□□□ -1.33
SKI2YLR398C ZDS2P54786 942 aa6.73□□□□□ -1.33
SKI2YLR398C TMA16Q08687 178 aa6.73□□□□□ -1.33
SKI2YLR398C SNU66Q12420 587 aaPredicted RBP6.73□□□□□ -1.33
SKI2YLR398C REC107P21651 314 aa6.73□□□□□ -1.33
SKI2YLR398C TFC3P34111 1160 aa6.73□□□□□ -1.33
SKI2YLR398C TMA64Q04600 565 aaKnown RBP6.73□□□□□ -1.33
SKI2YLR398C MLP1Q02455 1875 aaKnown RBP6.73□□□□□ -1.33
SKI2YLR398C PDR11P40550 1411 aa6.73□□□□□ -1.33
SKI2YLR398C RPS6AP0CX37 236 aaKnown RBP6.73□□□□□ -1.33
SKI2YLR398C RPS6BP0CX38 236 aaPredicted RBP6.73□□□□□ -1.33
SKI2YLR398C UGA3P26370 528 aa6.73□□□□□ -1.33
SKI2YLR398C GYP6P32806 458 aa6.73□□□□□ -1.33
SKI2YLR398C MRE11P32829 692 aa6.73□□□□□ -1.33
SKI2YLR398C NFU1P32860 256 aa6.73□□□□□ -1.33
SKI2YLR398C BOI2P39969 1040 aa6.73□□□□□ -1.33
SKI2YLR398C ALD4P46367 519 aaKnown RBP6.73□□□□□ -1.33
SKI2YLR398C BRE1Q07457 700 aaKnown RBP6.73□□□□□ -1.33
SKI2YLR398C YLL054CQ12244 843 aa6.73□□□□□ -1.33
SKI2YLR398C YSP2Q06681 1438 aa6.72□□□□□ -1.33
SKI2YLR398C SEC7P11075 2009 aaKnown RBP6.72□□□□□ -1.33
SKI2YLR398C APL1P27351 700 aa6.72□□□□□ -1.33
SKI2YLR398C STE13P33894 931 aa6.72□□□□□ -1.33
SKI2YLR398C SGM1P47166 707 aa6.72□□□□□ -1.33
SKI2YLR398C MRD1Q06106 887 aaKnown RBP6.72□□□□□ -1.33
SKI2YLR398C ALR1Q08269 859 aa6.72□□□□□ -1.33
SKI2YLR398C ELG1Q12050 791 aa6.72□□□□□ -1.33
SKI2YLR398C MCD4P36051 919 aa6.72□□□□□ -1.33
SKI2YLR398C AOS1Q06624 347 aa6.72□□□□□ -1.33
SKI2YLR398C MCM16Q12262 181 aa6.72□□□□□ -1.33
SKI2YLR398C CLB3P24870 427 aa6.72□□□□□ -1.33
SKI2YLR398C MET4P32389 672 aa6.72□□□□□ -1.33
SKI2YLR398C GRX4P32642 244 aa6.72□□□□□ -1.33
SKI2YLR398C ADE17P38009 592 aaKnown RBP6.72□□□□□ -1.33
SKI2YLR398C YAP5P40574 245 aa6.72□□□□□ -1.33
SKI2YLR398C RLP7P40693 322 aaKnown RBP6.72□□□□□ -1.33
SKI2YLR398C DSD1P53095 428 aa6.72□□□□□ -1.33
SKI2YLR398C TY1B-AO13527 1196 aaKnown RBP6.71□□□□□ -1.33
SKI2YLR398C GSY2P27472 705 aa6.71□□□□□ -1.33
SKI2YLR398C SEC20P28791 383 aa6.71□□□□□ -1.33
SKI2YLR398C INA17Q02888 182 aa6.71□□□□□ -1.33
SKI2YLR398C KRE28Q04431 385 aa6.71□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms