RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C TY2B-DR1Q12472 1770 aa8.01□□□□□ -1.13
AFG2YLR397C TY2B-BQ12491 1770 aa8.01□□□□□ -1.13
AFG2YLR397C TY2B-OR2Q12501 1770 aa8.01□□□□□ -1.13
AFG2YLR397C TY1B-DR3Q99231 1755 aa8.01□□□□□ -1.13
AFG2YLR397C KCC4P25389 1037 aa8.01□□□□□ -1.13
AFG2YLR397C SLA2P33338 968 aa8.01□□□□□ -1.13
AFG2YLR397C CDC27P38042 758 aa8.01□□□□□ -1.13
AFG2YLR397C CCT5P40413 562 aaKnown RBP8.01□□□□□ -1.13
AFG2YLR397C RPL17BP46990 184 aaKnown RBP8.01□□□□□ -1.13
AFG2YLR397C YJR079WP47126 109 aa8.01□□□□□ -1.13
AFG2YLR397C TRP5P00931 707 aaKnown RBP8□□□□□ -1.13
AFG2YLR397C RAD1P06777 1100 aa8□□□□□ -1.13
AFG2YLR397C UBC1P21734 215 aaKnown RBP8□□□□□ -1.13
AFG2YLR397C PTC4P38089 393 aa8□□□□□ -1.13
AFG2YLR397C INA22P40576 216 aa8□□□□□ -1.13
AFG2YLR397C SET2P46995 733 aaKnown RBP8□□□□□ -1.13
AFG2YLR397C JJJ2P46997 583 aa8□□□□□ -1.13
AFG2YLR397C ILM1P47155 203 aa8□□□□□ -1.13
AFG2YLR397C ARR2Q06597 130 aa8□□□□□ -1.13
AFG2YLR397C DNL4Q08387 944 aaPredicted RBP8□□□□□ -1.13
AFG2YLR397C SNT2P53127 1403 aa8□□□□□ -1.13
AFG2YLR397C SEC15P22224 910 aa8□□□□□ -1.13
AFG2YLR397C CDC15P27636 974 aa8□□□□□ -1.13
AFG2YLR397C EFB1P32471 206 aaKnown RBP8□□□□□ -1.13
AFG2YLR397C MRE11P32829 692 aa8□□□□□ -1.13
AFG2YLR397C DMA1P38823 416 aa8□□□□□ -1.13
AFG2YLR397C CCT4P39078 528 aaKnown RBP8□□□□□ -1.13
AFG2YLR397C RTR1P40084 226 aaPredicted RBP8□□□□□ -1.13
AFG2YLR397C RPA14P50106 137 aa8□□□□□ -1.13
AFG2YLR397C HOS2P53096 452 aaPredicted RBP8□□□□□ -1.13
AFG2YLR397C THI22Q06490 572 aa8□□□□□ -1.13
AFG2YLR397C TDA11P38854 504 aa7.99□□□□□ -1.13
AFG2YLR397C MRX1P40050 688 aa7.99□□□□□ -1.13
AFG2YLR397C SYG1P40528 902 aa7.99□□□□□ -1.13
AFG2YLR397C YPL109CQ02981 657 aa7.99□□□□□ -1.13
AFG2YLR397C RSC2Q06488 889 aa7.99□□□□□ -1.13
AFG2YLR397C NOC3Q07896 663 aaPredicted RBP7.99□□□□□ -1.13
AFG2YLR397C HYR1P40581 163 aaKnown RBP7.98□□□□□ -1.13
AFG2YLR397C GCD10P41814 478 aa7.98□□□□□ -1.13
AFG2YLR397C FYV8P46949 817 aaKnown RBP7.98□□□□□ -1.13
AFG2YLR397C SSQ1Q05931 657 aaPredicted RBP7.98□□□□□ -1.13
AFG2YLR397C YOL036WQ08206 761 aa7.98□□□□□ -1.13
AFG2YLR397C NCR1Q12200 1170 aa7.98□□□□□ -1.13
AFG2YLR397C SBP1P10080 294 aaKnown RBP7.98□□□□□ -1.13
AFG2YLR397C VAN1P23642 535 aa7.98□□□□□ -1.13
AFG2YLR397C PRP22P24384 1145 aaKnown RBP7.98□□□□□ -1.13
AFG2YLR397C MUD2P36084 527 aaKnown RBP7.98□□□□□ -1.13
AFG2YLR397C BOI1P38041 980 aaKnown RBP7.98□□□□□ -1.13
AFG2YLR397C NMD3P38861 518 aaKnown RBP7.98□□□□□ -1.13
AFG2YLR397C HUL4P40985 892 aa7.98□□□□□ -1.13
AFG2YLR397C RAD17P48581 401 aa7.98□□□□□ -1.13
AFG2YLR397C APT1P49435 187 aaKnown RBP7.98□□□□□ -1.13
AFG2YLR397C SHE10P53075 577 aa7.98□□□□□ -1.13
AFG2YLR397C YGR266WP53326 701 aa7.98□□□□□ -1.13
AFG2YLR397C BNI5P53890 448 aaKnown RBP7.98□□□□□ -1.13
AFG2YLR397C ESBP6P53918 673 aa7.98□□□□□ -1.13
AFG2YLR397C STE23Q06010 1027 aa7.98□□□□□ -1.13
AFG2YLR397C CSR1Q06705 408 aaKnown RBP7.98□□□□□ -1.13
AFG2YLR397C RPN2P32565 945 aaKnown RBP7.97□□□□□ -1.13
AFG2YLR397C SSP1P38871 571 aa7.97□□□□□ -1.13
AFG2YLR397C SAK1P38990 1142 aa7.97□□□□□ -1.13
AFG2YLR397C WAR1Q03631 944 aa7.97□□□□□ -1.13
AFG2YLR397C SPO71Q03868 1245 aa7.97□□□□□ -1.13
AFG2YLR397C ERB1Q04660 807 aaKnown RBP7.97□□□□□ -1.13
AFG2YLR397C SPN1Q06505 410 aaPredicted RBP7.97□□□□□ -1.13
AFG2YLR397C ATG23Q06671 453 aa7.97□□□□□ -1.13
AFG2YLR397C HTZ1Q12692 134 aaKnown RBP7.97□□□□□ -1.13
AFG2YLR397C TY1B-HO13535 1793 aa7.97□□□□□ -1.13
AFG2YLR397C TY1B-DR5P0C2I2 1755 aa7.97□□□□□ -1.13
AFG2YLR397C TY1B-DR6P0C2I3 1755 aa7.97□□□□□ -1.13
AFG2YLR397C TY1B-LR2P0C2I5 1755 aa7.97□□□□□ -1.13
AFG2YLR397C TY1B-LR3P0C2I6 1755 aaKnown RBP7.97□□□□□ -1.13
AFG2YLR397C TY1B-PR1P0C2I9 1755 aaKnown RBP7.97□□□□□ -1.13
AFG2YLR397C TY1B-PR2P0C2J0 1756 aa7.97□□□□□ -1.13
AFG2YLR397C TY1B-PR3P0C2J1 1755 aaKnown RBP7.97□□□□□ -1.13
AFG2YLR397C TY1B-JR1P47098 1755 aa7.97□□□□□ -1.13
AFG2YLR397C TY1B-ML2Q03434 1755 aaKnown RBP7.97□□□□□ -1.13
AFG2YLR397C TY1B-ER1Q03612 1755 aa7.97□□□□□ -1.13
AFG2YLR397C TY1B-ML1Q04711 1755 aaKnown RBP7.97□□□□□ -1.13
AFG2YLR397C TY1B-GR2Q12269 1755 aa7.97□□□□□ -1.13
AFG2YLR397C TY1B-OLQ12273 1755 aa7.97□□□□□ -1.13
AFG2YLR397C TY1B-PLQ12414 1755 aaKnown RBP7.97□□□□□ -1.13
AFG2YLR397C FUS1P11710 512 aa7.97□□□□□ -1.13
AFG2YLR397C KGD2P19262 463 aaPredicted RBP7.97□□□□□ -1.13
AFG2YLR397C TFC3P34111 1160 aa7.97□□□□□ -1.13
AFG2YLR397C TBS1P38114 1094 aa7.97□□□□□ -1.13
AFG2YLR397C FZO1P38297 855 aa7.97□□□□□ -1.13
AFG2YLR397C SPC72P39723 622 aa7.97□□□□□ -1.13
AFG2YLR397C MIC19P43594 170 aa7.97□□□□□ -1.13
AFG2YLR397C RKM4Q12504 494 aa7.97□□□□□ -1.13
AFG2YLR397C TYR1P20049 452 aa7.96□□□□□ -1.13
AFG2YLR397C PAP1P29468 568 aaKnown RBP7.96□□□□□ -1.13
AFG2YLR397C HCS1P34243 683 aa7.96□□□□□ -1.13
AFG2YLR397C PET100P38958 111 aa7.96□□□□□ -1.13
AFG2YLR397C GCN20P43535 752 aaKnown RBP7.96□□□□□ -1.13
AFG2YLR397C STR2P47164 639 aa7.96□□□□□ -1.13
AFG2YLR397C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.96□□□□□ -1.13not detected
AFG2YLR397C LYS2P07702 1392 aa7.96□□□□□ -1.14
AFG2YLR397C RNR2P09938 399 aaKnown RBP7.96□□□□□ -1.14
AFG2YLR397C RPO26P20435 155 aa7.96□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms