RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGD1	YLR336C	FET4	P40988	552 aa		3.2	□□□□□ -1.9
SGD1	YLR336C	YGL140C	P53120	1219 aa		3.2	□□□□□ -1.9
SGD1	YLR336C	GUP1	P53154	560 aa		3.2	□□□□□ -1.9
SGD1	YLR336C	ALD6	P54115	500 aa	Known RBP	3.2	□□□□□ -1.9
SGD1	YLR336C	TY1A-GR1	Q12085	440 aa		3.2	□□□□□ -1.9
SGD1	YLR336C	DPH6	Q12429	685 aa		3.2	□□□□□ -1.9
SGD1	YLR336C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.2	□□□□□ -1.9
SGD1	YLR336C	TY1A-OL	Q92392	440 aa	Known RBP	3.2	□□□□□ -1.9
SGD1	YLR336C	DUT1	P33317	147 aa		3.19	□□□□□ -1.9
SGD1	YLR336C	PAN5	P38787	379 aa		3.19	□□□□□ -1.9
SGD1	YLR336C	SQT1	P35184	431 aa		3.19	□□□□□ -1.9
SGD1	YLR336C	ALG14	P38242	237 aa		3.19	□□□□□ -1.9
SGD1	YLR336C	VAC8	P39968	578 aa		3.19	□□□□□ -1.9
SGD1	YLR336C	MAD1	P40957	749 aa		3.19	□□□□□ -1.9
SGD1	YLR336C	XKS1	P42826	600 aa		3.19	□□□□□ -1.9
SGD1	YLR336C	REC8	Q12188	680 aa		3.19	□□□□□ -1.9
SGD1	YLR336C	MNR2	P35724	969 aa		3.18	□□□□□ -1.9
SGD1	YLR336C	RDH54	P38086	958 aa		3.18	□□□□□ -1.9
SGD1	YLR336C	POL5	P39985	1022 aa	Known RBP	3.18	□□□□□ -1.9
SGD1	YLR336C	GNP1	P48813	663 aa		3.18	□□□□□ -1.9
SGD1	YLR336C	HDA2	Q06629	674 aa		3.18	□□□□□ -1.9
SGD1	YLR336C	TY4B-P	A0A0B7P3V8	1104 aa		3.17	□□□□□ -1.9
SGD1	YLR336C	CDC34	P14682	295 aa		3.17	□□□□□ -1.9
SGD1	YLR336C	SEC23	P15303	768 aa	Known RBP	3.17	□□□□□ -1.9
SGD1	YLR336C	MRL1	Q06815	381 aa		3.17	□□□□□ -1.9
SGD1	YLR336C	YIG1	Q08956	461 aa		3.17	□□□□□ -1.9
SGD1	YLR336C	TY4A-H	Q6Q5P6	413 aa		3.17	□□□□□ -1.9
SGD1	YLR336C	CLN2	P20438	545 aa		3.17	□□□□□ -1.9
SGD1	YLR336C	SBE2	P42223	864 aa	Known RBP	3.17	□□□□□ -1.9
SGD1	YLR336C	SLS1	P42900	643 aa		3.17	□□□□□ -1.9
SGD1	YLR336C	FAA4	P47912	694 aa	Known RBP	3.17	□□□□□ -1.9
SGD1	YLR336C	UTP22	P53254	1237 aa	Predicted RBP	3.17	□□□□□ -1.9
SGD1	YLR336C	SLP1	Q12232	587 aa		3.17	□□□□□ -1.9
SGD1	YLR336C	ERS1	P17261	260 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	NAP1	P25293	417 aa	Known RBP	3.16	□□□□□ -1.9
SGD1	YLR336C	NEM1	P38757	446 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	HXT13	P39924	564 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	LEM3	P42838	414 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	HXT17	P53631	564 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	HXT15	P54854	567 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	NHA1	Q99271	985 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	YKL077W	P36081	392 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	SHU2	P38957	223 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	ORC1	P54784	914 aa	Predicted RBP	3.16	□□□□□ -1.9
SGD1	YLR336C	GDE1	Q02979	1223 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	SPO71	Q03868	1245 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	RTT10	Q08924	1013 aa		3.16	□□□□□ -1.9
SGD1	YLR336C	YGR053C	P53234	283 aa		3.15	□□□□□ -1.9
SGD1	YLR336C	CWC24	P53769	259 aa		3.15	□□□□□ -1.9
SGD1	YLR336C	EEB1	Q02891	456 aa		3.15	□□□□□ -1.9
SGD1	YLR336C	UTP5	Q04177	643 aa	Known RBP	3.15	□□□□□ -1.9
SGD1	YLR336C	VMA4	P22203	233 aa	Known RBP	3.15	□□□□□ -1.91
SGD1	YLR336C	YFL066C	P43538	392 aa		3.15	□□□□□ -1.91
SGD1	YLR336C	SSF2	Q12153	453 aa	Predicted RBP	3.15	□□□□□ -1.91
SGD1	YLR336C	OCA5	P38738	679 aa		3.14	□□□□□ -1.91
SGD1	YLR336C	RRM3	P38766	723 aa		3.14	□□□□□ -1.91
SGD1	YLR336C	MEC3	Q02574	474 aa		3.14	□□□□□ -1.91
SGD1	YLR336C	ROD1	Q02805	837 aa		3.14	□□□□□ -1.91
SGD1	YLR336C	ALG6	Q12001	544 aa	Known RBP	3.14	□□□□□ -1.91
SGD1	YLR336C	ELG1	Q12050	791 aa		3.14	□□□□□ -1.91
SGD1	YLR336C	DED1	P06634	604 aa	Known RBP	3.14	□□□□□ -1.91
SGD1	YLR336C	SAC7	P17121	654 aa		3.14	□□□□□ -1.91
SGD1	YLR336C	MDJ1	P35191	511 aa		3.14	□□□□□ -1.91
SGD1	YLR336C	BOI2	P39969	1040 aa		3.14	□□□□□ -1.91
SGD1	YLR336C	SIW14	P53965	281 aa		3.14	□□□□□ -1.91
SGD1	YLR336C	GAS5	Q08193	484 aa		3.14	□□□□□ -1.91
SGD1	YLR336C	AI1	P03875	834 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	PRI2	P20457	528 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	RER2	P35196	286 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	YKL069W	P36088	180 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	REI1	P38344	393 aa	Predicted RBP	3.13	□□□□□ -1.91
SGD1	YLR336C	SPO74	P45819	413 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	GCV1	P48015	400 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	YNR014W	P53719	212 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	THI72	Q08579	599 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	KIP3	P53086	805 aa	Known RBP	3.13	□□□□□ -1.91
SGD1	YLR336C	RAT1	Q02792	1006 aa	Known RBP	3.13	□□□□□ -1.91
SGD1	YLR336C	EST2	Q06163	884 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	TY1A-NL1	Q12391	440 aa	Known RBP	3.13	□□□□□ -1.91
SGD1	YLR336C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	RIP-Chip
SGD1	YLR336C	TAF13	P11747	167 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	MKK2	P32491	506 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	MAE1	P36013	669 aa	Known RBP	3.13	□□□□□ -1.91
SGD1	YLR336C	YNR063W	P53749	607 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
SGD1	YLR336C	TDA6	Q06466	467 aa		3.13	□□□□□ -1.91
SGD1	YLR336C	TRP2	P00899	507 aa	Known RBP	3.12	□□□□□ -1.91
SGD1	YLR336C	AFG2	P32794	780 aa		3.12	□□□□□ -1.91
SGD1	YLR336C	ADD66	P36040	267 aa		3.12	□□□□□ -1.91
SGD1	YLR336C	TAT2	P38967	592 aa		3.12	□□□□□ -1.91
SGD1	YLR336C	MTR4	P47047	1073 aa	Known RBP	3.12	□□□□□ -1.91
SGD1	YLR336C	DSE4	P53753	1117 aa		3.12	□□□□□ -1.91
SGD1	YLR336C	YMR074C	Q04773	145 aa		3.12	□□□□□ -1.91
SGD1	YLR336C	ESC2	Q06340	456 aa		3.12	□□□□□ -1.91
SGD1	YLR336C	OPI10	Q08202	246 aa		3.12	□□□□□ -1.91
SGD1	YLR336C	TMA46	Q12000	345 aa	Known RBP	3.12	□□□□□ -1.91
SGD1	YLR336C	ARL1	P38116	183 aa	Known RBP	3.12	□□□□□ -1.91
SGD1	YLR336C	NNF1	P47149	201 aa		3.12	□□□□□ -1.91
SGD1	YLR336C	BUD9	P53226	547 aa		3.12	□□□□□ -1.91
SGD1	YLR336C	YGR045C	P53229	120 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms