RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W YLL054CQ12244 843 aa6.26□□□□□ -1.41
SMD2YLR275W PRP40P33203 583 aaKnown RBP6.25□□□□□ -1.41
SMD2YLR275W DAL4Q04895 635 aa6.25□□□□□ -1.41
SMD2YLR275W YOR223WQ12015 292 aa6.25□□□□□ -1.41
SMD2YLR275W KAR2P16474 682 aaKnown RBP6.24□□□□□ -1.41
SMD2YLR275W AKR1P39010 764 aa6.24□□□□□ -1.41
SMD2YLR275W MEC3Q02574 474 aa6.24□□□□□ -1.41
SMD2YLR275W RPT1P33299 467 aaKnown RBP6.23□□□□□ -1.41
SMD2YLR275W SAF1P38352 637 aa6.23□□□□□ -1.41
SMD2YLR275W SHU2P38957 223 aa6.23□□□□□ -1.41
SMD2YLR275W TY1A-LR4P0C2I8 440 aaKnown RBP6.22□□□□□ -1.41
SMD2YLR275W TY1A-DR6P0CX70 440 aa6.22□□□□□ -1.41
SMD2YLR275W TY1A-ER1P0CX71 440 aa6.22□□□□□ -1.41
SMD2YLR275W TY1A-LR2P0CX72 440 aa6.22□□□□□ -1.41
SMD2YLR275W TY1A-PLP0CX73 440 aa6.22□□□□□ -1.41
SMD2YLR275W TY1A-JR1P0CX74 440 aa6.22□□□□□ -1.41
SMD2YLR275W TY1A-LR3P0CX75 440 aa6.22□□□□□ -1.41
SMD2YLR275W TY1A-ML2P0CX76 440 aa6.22□□□□□ -1.41
SMD2YLR275W NAM7P30771 971 aaKnown RBP6.22□□□□□ -1.41
SMD2YLR275W YKL077WP36081 392 aa6.22□□□□□ -1.41
SMD2YLR275W TOS4Q06266 489 aa6.22□□□□□ -1.41
SMD2YLR275W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
SMD2YLR275W TY1A-GR1Q12085 440 aa6.22□□□□□ -1.41
SMD2YLR275W YLR122CQ12312 125 aa6.22□□□□□ -1.41
SMD2YLR275W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.22□□□□□ -1.41
SMD2YLR275W TY1A-OLQ92392 440 aaKnown RBP6.22□□□□□ -1.41
SMD2YLR275W UGA4P32837 571 aa6.21□□□□□ -1.42
SMD2YLR275W KAE1P36132 386 aa6.21□□□□□ -1.42
SMD2YLR275W REI1P38344 393 aaPredicted RBP6.21□□□□□ -1.42
SMD2YLR275W NOG1Q02892 647 aaKnown RBP6.21□□□□□ -1.42
SMD2YLR275W DOT1Q04089 582 aaKnown RBP6.21□□□□□ -1.42
SMD2YLR275W CHS2P14180 963 aa6.2□□□□□ -1.42
SMD2YLR275W HEM3P28789 327 aa6.2□□□□□ -1.42
SMD2YLR275W ARL1P38116 183 aaKnown RBP6.2□□□□□ -1.42
SMD2YLR275W EXO5P38289 585 aa6.2□□□□□ -1.42
SMD2YLR275W POL32P47110 350 aa6.2□□□□□ -1.42
SMD2YLR275W ULP1Q02724 621 aa6.2□□□□□ -1.42
SMD2YLR275W GIC2Q06648 383 aa6.2□□□□□ -1.42
SMD2YLR275W GPT2P36148 743 aa6.19□□□□□ -1.42
SMD2YLR275W FAA3P39002 694 aa6.19□□□□□ -1.42
SMD2YLR275W RSM26P47141 266 aa6.19□□□□□ -1.42
SMD2YLR275W ALG6Q12001 544 aaKnown RBP6.19□□□□□ -1.42
SMD2YLR275W SQT1P35184 431 aa6.18□□□□□ -1.42
SMD2YLR275W MGE1P38523 228 aa6.18□□□□□ -1.42
SMD2YLR275W HXK1P04806 485 aaKnown RBP6.17□□□□□ -1.42
SMD2YLR275W MSH3P25336 1018 aa6.17□□□□□ -1.42
SMD2YLR275W ALO1P54783 526 aaKnown RBP6.17□□□□□ -1.42
SMD2YLR275W PEX13P80667 386 aa6.17□□□□□ -1.42
SMD2YLR275W YPL109CQ02981 657 aa6.17□□□□□ -1.42
SMD2YLR275W ADI1Q03677 179 aa6.17□□□□□ -1.42
SMD2YLR275W ATE1P16639 503 aa6.16□□□□□ -1.42
SMD2YLR275W NEM1P38757 446 aa6.16□□□□□ -1.42
SMD2YLR275W SLS1P42900 643 aa6.16□□□□□ -1.42
SMD2YLR275W YGR130CP53278 816 aa6.16□□□□□ -1.42
SMD2YLR275W TRP3P00937 484 aa6.15□□□□□ -1.42
SMD2YLR275W PEX28P38848 579 aa6.15□□□□□ -1.42
SMD2YLR275W MTR4P47047 1073 aaKnown RBP6.15□□□□□ -1.42
SMD2YLR275W YGR122WP53272 402 aa6.15□□□□□ -1.42
SMD2YLR275W RRP15Q06511 250 aaPredicted RBP6.15□□□□□ -1.42
SMD2YLR275W AVO1Q08236 1176 aa6.15□□□□□ -1.42
SMD2YLR275W MED7Q08278 222 aa6.15□□□□□ -1.42
SMD2YLR275W MSB1P21339 1137 aaKnown RBP6.14□□□□□ -1.43
SMD2YLR275W ASF1P32447 279 aa6.14□□□□□ -1.43
SMD2YLR275W YKR073CP36153 106 aa6.14□□□□□ -1.43
SMD2YLR275W SPO74P45819 413 aa6.14□□□□□ -1.43
SMD2YLR275W YGR045CP53229 120 aa6.14□□□□□ -1.43
SMD2YLR275W VMA4P22203 233 aaKnown RBP6.13□□□□□ -1.43
SMD2YLR275W OMA1P36163 345 aa6.13□□□□□ -1.43
SMD2YLR275W MSH4P40965 878 aaPredicted RBP6.13□□□□□ -1.43
SMD2YLR275W MMM1P41800 426 aa6.13□□□□□ -1.43
SMD2YLR275W YJR107WP47145 328 aa6.13□□□□□ -1.43
SMD2YLR275W ELA1P53861 379 aaPredicted RBP6.13□□□□□ -1.43
SMD2YLR275W MAC1P35192 417 aa6.12□□□□□ -1.43
SMD2YLR275W YGL140CP53120 1219 aa6.12□□□□□ -1.43
SMD2YLR275W UTP5Q04177 643 aaKnown RBP6.12□□□□□ -1.43
SMD2YLR275W MCD1Q12158 566 aa6.12□□□□□ -1.43
SMD2YLR275W CYC7P00045 113 aa6.11□□□□□ -1.43
SMD2YLR275W RPS4AP0CX35 261 aaKnown RBP6.11□□□□□ -1.43
SMD2YLR275W RPS4BP0CX36 261 aaKnown RBP6.11□□□□□ -1.43
SMD2YLR275W SMY2P32909 740 aaKnown RBP6.11□□□□□ -1.43
SMD2YLR275W WHI3P34761 661 aaKnown RBP6.11□□□□□ -1.43
SMD2YLR275W ATG14P38270 344 aa6.11□□□□□ -1.43
SMD2YLR275W TOS1P38288 455 aa6.11□□□□□ -1.43
SMD2YLR275W RPS26AP39938 119 aaKnown RBP6.11□□□□□ -1.43
SMD2YLR275W RPS26BP39939 119 aaKnown RBP6.11□□□□□ -1.43
SMD2YLR275W PIC2P40035 300 aa6.11□□□□□ -1.43
SMD2YLR275W MRPS18P42847 217 aa6.11□□□□□ -1.43
SMD2YLR275W CIT3P43635 486 aa6.11□□□□□ -1.43
SMD2YLR275W INP52P50942 1183 aa6.11□□□□□ -1.43
SMD2YLR275W ALT1P52893 592 aa6.11□□□□□ -1.43
SMD2YLR275W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
SMD2YLR275W RAD2P07276 1031 aa6.1□□□□□ -1.43
SMD2YLR275W CYC8P14922 966 aa6.1□□□□□ -1.43
SMD2YLR275W PRE9P23638 258 aaKnown RBP6.1□□□□□ -1.43
SMD2YLR275W NFS1P25374 497 aa6.1□□□□□ -1.43
SMD2YLR275W MCM2P29469 868 aa6.1□□□□□ -1.43
SMD2YLR275W NNK1P36003 928 aa6.1□□□□□ -1.43
SMD2YLR275W RDH54P38086 958 aa6.1□□□□□ -1.43
SMD2YLR275W YAR028WP39548 234 aa6.1□□□□□ -1.43
SMD2YLR275W XKS1P42826 600 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms