RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	MRS2	Q01926	470 aa		5.8	□□□□□ -1.48
PWP1	YLR196W	UTP13	Q05946	817 aa	Known RBP	5.8	□□□□□ -1.48
PWP1	YLR196W	ARV1	Q06541	321 aa		5.8	□□□□□ -1.48
PWP1	YLR196W	DBP10	Q12389	995 aa	Known RBP	5.8	□□□□□ -1.48
PWP1	YLR196W	OCA5	P38738	679 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	YER034W	P40022	185 aa	Known RBP	5.79	□□□□□ -1.48
PWP1	YLR196W	TGL3	P40308	642 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	YGL140C	P53120	1219 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	HEF3	P53978	1044 aa	Known RBP	5.79	□□□□□ -1.48
PWP1	YLR196W	UBX2	Q04228	584 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	NOC3	Q07896	663 aa	Predicted RBP	5.79	□□□□□ -1.48
PWP1	YLR196W	NUP145	P49687	1317 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	APN1	P22936	367 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	SEC14	P24280	304 aa	Known RBP	5.79	□□□□□ -1.48
PWP1	YLR196W	SMY1	P32364	656 aa	Known RBP	5.79	□□□□□ -1.48
PWP1	YLR196W	RTG2	P32608	588 aa	Known RBP	5.79	□□□□□ -1.48
PWP1	YLR196W	MRE11	P32829	692 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	TFC3	P34111	1160 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	CSE4	P36012	229 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	SSZ1	P38788	538 aa	Known RBP	5.79	□□□□□ -1.48
PWP1	YLR196W	SPC72	P39723	622 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	UTP18	P40362	594 aa	Predicted RBP	5.79	□□□□□ -1.48
PWP1	YLR196W	TIM54	P47045	478 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	YDL073W	Q07454	984 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	YOL057W	Q08225	711 aa		5.79	□□□□□ -1.48
PWP1	YLR196W	PRD1	P25375	712 aa		5.78	□□□□□ -1.48
PWP1	YLR196W	PAP1	P29468	568 aa	Known RBP	5.78	□□□□□ -1.48
PWP1	YLR196W	TTI1	P36097	1038 aa		5.78	□□□□□ -1.48
PWP1	YLR196W	SAP1	P39955	897 aa	Known RBP	5.78	□□□□□ -1.48
PWP1	YLR196W	FTR1	P40088	404 aa		5.78	□□□□□ -1.48
PWP1	YLR196W	YTA6	P40328	754 aa		5.78	□□□□□ -1.48
PWP1	YLR196W	LSC1	P53598	329 aa	Known RBP	5.78	□□□□□ -1.48
PWP1	YLR196W	YNL035C	P53962	389 aa	Known RBP	5.78	□□□□□ -1.48
PWP1	YLR196W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.78	□□□□□ -1.48	not detected
PWP1	YLR196W	FMP30	Q02883	468 aa		5.78	□□□□□ -1.48
PWP1	YLR196W	INP2	Q03824	705 aa		5.78	□□□□□ -1.48
PWP1	YLR196W	VMS1	Q04311	632 aa	Known RBP	5.78	□□□□□ -1.48
PWP1	YLR196W	YMR111C	Q04461	462 aa	Predicted RBP	5.78	□□□□□ -1.48
PWP1	YLR196W	SML1	Q04964	104 aa		5.78	□□□□□ -1.48
PWP1	YLR196W	CSR1	Q06705	408 aa	Known RBP	5.78	□□□□□ -1.48
PWP1	YLR196W	MPC54	Q08550	464 aa		5.78	□□□□□ -1.48
PWP1	YLR196W	SLK19	Q08581	821 aa	Known RBP	5.78	□□□□□ -1.48
PWP1	YLR196W	LEU1	P07264	779 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	KAR2	P16474	682 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	MRPL25	P23369	157 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	SWC3	P31376	625 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	SAS3	P34218	831 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
PWP1	YLR196W	VPS24	P36095	224 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	ARL1	P38116	183 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	OTU2	P38747	307 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	IPL1	P38991	367 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	SPR3	P41901	512 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	IOC3	P43596	787 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	SET2	P46995	733 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	RTF1	P53064	558 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	HOS3	Q02959	697 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	PUF6	Q04373	656 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	RRN11	Q04712	507 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	YPR097W	Q06839	1073 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	RTT109	Q07794	436 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	HEM1	P09950	548 aa	Predicted RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	NAT1	P12945	854 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	VMA1	P17255	1071 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	TSR4	P25040	408 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	CDC48	P25694	835 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	SWD1	P39706	426 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	PXA1	P41909	870 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	LAM5	P43560	674 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	YFR006W	P43590	535 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	STE20	Q03497	939 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	FUS2	Q05670	677 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	HIM1	Q06674	414 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	ISA1	Q07821	250 aa	Predicted RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	YOR352W	Q08816	343 aa		5.77	□□□□□ -1.49
PWP1	YLR196W	RIO1	Q12196	484 aa	Known RBP	5.77	□□□□□ -1.49
PWP1	YLR196W	SIR4	P11978	1358 aa		5.76	□□□□□ -1.49
PWP1	YLR196W	KAR1	P11927	433 aa		5.76	□□□□□ -1.49
PWP1	YLR196W	SEN2	P16658	377 aa		5.76	□□□□□ -1.49
PWP1	YLR196W	HNM1	P19807	563 aa		5.76	□□□□□ -1.49
PWP1	YLR196W	MAK11	P20484	414 aa	Known RBP	5.76	□□□□□ -1.49
PWP1	YLR196W	RPN12	P32496	274 aa		5.76	□□□□□ -1.49
PWP1	YLR196W	CSE1	P33307	960 aa		5.76	□□□□□ -1.49
PWP1	YLR196W	RRP1	P35178	278 aa	Predicted RBP	5.76	□□□□□ -1.49
PWP1	YLR196W	RTT107	P38850	1070 aa		5.76	□□□□□ -1.49
PWP1	YLR196W	HOP2	P53187	214 aa		5.76	□□□□□ -1.49
PWP1	YLR196W	IRC3	Q06683	689 aa		5.76	□□□□□ -1.49
PWP1	YLR196W	AUS1	Q08409	1394 aa		5.76	□□□□□ -1.49
PWP1	YLR196W	BNI1	P41832	1953 aa		5.75	□□□□□ -1.49
PWP1	YLR196W	PKC1	P24583	1151 aa		5.75	□□□□□ -1.49
PWP1	YLR196W	CDC10	P25342	322 aa	Known RBP	5.75	□□□□□ -1.49
PWP1	YLR196W	GGA2	P38817	585 aa	Known RBP	5.75	□□□□□ -1.49
PWP1	YLR196W	RTS1	P38903	757 aa		5.75	□□□□□ -1.49
PWP1	YLR196W	MXR1	P40029	184 aa		5.75	□□□□□ -1.49
PWP1	YLR196W	TMN3	P40071	706 aa		5.75	□□□□□ -1.49
PWP1	YLR196W	IRR1	P40541	1150 aa		5.75	□□□□□ -1.49
PWP1	YLR196W	GCD14	P46959	383 aa	Predicted RBP	5.75	□□□□□ -1.49
PWP1	YLR196W	ECM11	Q04110	302 aa		5.75	□□□□□ -1.49
PWP1	YLR196W	SPP382	Q06411	708 aa	Predicted RBP	5.75	□□□□□ -1.49
PWP1	YLR196W	DUR1,2	P32528	1835 aa	Known RBP	5.75	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms