RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C YMR074CQ04773 145 aa2.86□□□□□ -1.95
RFX1YLR176C AI3P03877 415 aa2.85□□□□□ -1.95
RFX1YLR176C HXK1P04806 485 aaKnown RBP2.85□□□□□ -1.95
RFX1YLR176C TY1A-LR4P0C2I8 440 aaKnown RBP2.85□□□□□ -1.95
RFX1YLR176C TY1A-DR6P0CX70 440 aa2.85□□□□□ -1.95
RFX1YLR176C TY1A-ER1P0CX71 440 aa2.85□□□□□ -1.95
RFX1YLR176C TY1A-LR2P0CX72 440 aa2.85□□□□□ -1.95
RFX1YLR176C TY1A-PLP0CX73 440 aa2.85□□□□□ -1.95
RFX1YLR176C TY1A-JR1P0CX74 440 aa2.85□□□□□ -1.95
RFX1YLR176C TY1A-LR3P0CX75 440 aa2.85□□□□□ -1.95
RFX1YLR176C TY1A-ML2P0CX76 440 aa2.85□□□□□ -1.95
RFX1YLR176C RPS26AP39938 119 aaKnown RBP2.85□□□□□ -1.95
RFX1YLR176C RPS26BP39939 119 aaKnown RBP2.85□□□□□ -1.95
RFX1YLR176C FYV10P40492 516 aa2.85□□□□□ -1.95
RFX1YLR176C RSM26P47141 266 aa2.85□□□□□ -1.95
RFX1YLR176C YIG1Q08956 461 aa2.85□□□□□ -1.95
RFX1YLR176C TY1A-GR1Q12085 440 aa2.85□□□□□ -1.95
RFX1YLR176C TY1A-NL1Q12391 440 aaKnown RBP2.85□□□□□ -1.95
RFX1YLR176C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.85□□□□□ -1.95
RFX1YLR176C TY1A-OLQ92392 440 aaKnown RBP2.85□□□□□ -1.95
RFX1YLR176C SFA1P32771 386 aa2.85□□□□□ -1.95
RFX1YLR176C SEC8P32855 1065 aa2.85□□□□□ -1.95
RFX1YLR176C KIP3P53086 805 aaKnown RBP2.85□□□□□ -1.95
RFX1YLR176C UTP22P53254 1237 aaPredicted RBP2.85□□□□□ -1.95
RFX1YLR176C YGR122WP53272 402 aa2.85□□□□□ -1.95
RFX1YLR176C YPL109CQ02981 657 aa2.85□□□□□ -1.95
RFX1YLR176C OYE2Q03558 400 aaKnown RBP2.85□□□□□ -1.95
RFX1YLR176C SPR28Q04921 423 aa2.85□□□□□ -1.95
RFX1YLR176C SQT1P35184 431 aa2.84□□□□□ -1.95
RFX1YLR176C NRD1P53617 575 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
RFX1YLR176C FAR11P53917 953 aa2.84□□□□□ -1.95
RFX1YLR176C PEX13P80667 386 aa2.84□□□□□ -1.95
RFX1YLR176C RSC6P25632 483 aa2.84□□□□□ -1.95
RFX1YLR176C YKL077WP36081 392 aa2.84□□□□□ -1.95
RFX1YLR176C SHU2P38957 223 aa2.84□□□□□ -1.95
RFX1YLR176C GCV1P48015 400 aa2.84□□□□□ -1.95
RFX1YLR176C ADI1Q03677 179 aa2.84□□□□□ -1.95
RFX1YLR176C CYC8P14922 966 aa2.83□□□□□ -1.96
RFX1YLR176C MSH3P25336 1018 aa2.83□□□□□ -1.96
RFX1YLR176C EXO5P38289 585 aa2.83□□□□□ -1.96
RFX1YLR176C ARI1P53111 347 aaKnown RBP2.83□□□□□ -1.96
RFX1YLR176C NCE103P53615 221 aa2.83□□□□□ -1.96
RFX1YLR176C MEC3Q02574 474 aa2.83□□□□□ -1.96
RFX1YLR176C NOG1Q02892 647 aaKnown RBP2.83□□□□□ -1.96
RFX1YLR176C RAD2P07276 1031 aa2.83□□□□□ -1.96
RFX1YLR176C REI1P38344 393 aaPredicted RBP2.83□□□□□ -1.96
RFX1YLR176C PEX28P38848 579 aa2.83□□□□□ -1.96
RFX1YLR176C ALG6Q12001 544 aaKnown RBP2.83□□□□□ -1.96
RFX1YLR176C REC8Q12188 680 aa2.83□□□□□ -1.96
RFX1YLR176C YLL054CQ12244 843 aa2.83□□□□□ -1.96
RFX1YLR176C PRE9P23638 258 aaKnown RBP2.82□□□□□ -1.96
RFX1YLR176C PEP7P32609 515 aa2.82□□□□□ -1.96
RFX1YLR176C PIC2P40035 300 aa2.82□□□□□ -1.96
RFX1YLR176C MRPS18P42847 217 aa2.82□□□□□ -1.96
RFX1YLR176C SLS1P42900 643 aa2.82□□□□□ -1.96
RFX1YLR176C YPL034WQ03083 165 aa2.82□□□□□ -1.96
RFX1YLR176C YOR223WQ12015 292 aa2.82□□□□□ -1.96
RFX1YLR176C MCD1Q12158 566 aa2.82□□□□□ -1.96
RFX1YLR176C NAM7P30771 971 aaKnown RBP2.82□□□□□ -1.96
RFX1YLR176C PGM1P33401 570 aaKnown RBP2.82□□□□□ -1.96
RFX1YLR176C NEM1P38757 446 aa2.82□□□□□ -1.96
RFX1YLR176C AKR1P39010 764 aa2.82□□□□□ -1.96
RFX1YLR176C DOT1Q04089 582 aaKnown RBP2.82□□□□□ -1.96
RFX1YLR176C YGL140CP53120 1219 aa2.81□□□□□ -1.96
RFX1YLR176C COQ2P32378 372 aa2.81□□□□□ -1.96
RFX1YLR176C GPT2P36148 743 aa2.81□□□□□ -1.96
RFX1YLR176C SPO74P45819 413 aa2.81□□□□□ -1.96
RFX1YLR176C MTR4P47047 1073 aaKnown RBP2.81□□□□□ -1.96
RFX1YLR176C ESF1Q06344 628 aaKnown RBP2.81□□□□□ -1.96
RFX1YLR176C HEM13P11353 328 aaKnown RBP2.8□□□□□ -1.96
RFX1YLR176C ARL1P38116 183 aaKnown RBP2.8□□□□□ -1.96
RFX1YLR176C XKS1P42826 600 aa2.8□□□□□ -1.96
RFX1YLR176C INP52P50942 1183 aa2.8□□□□□ -1.96
RFX1YLR176C ELA1P53861 379 aaPredicted RBP2.8□□□□□ -1.96
RFX1YLR176C UTP5Q04177 643 aaKnown RBP2.8□□□□□ -1.96
RFX1YLR176C AVO1Q08236 1176 aa2.8□□□□□ -1.96
RFX1YLR176C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
RFX1YLR176C SEC23P15303 768 aaKnown RBP2.8□□□□□ -1.96
RFX1YLR176C VMA4P22203 233 aaKnown RBP2.8□□□□□ -1.96
RFX1YLR176C YGR045CP53229 120 aa2.8□□□□□ -1.96
RFX1YLR176C YNR063WP53749 607 aa2.8□□□□□ -1.96
RFX1YLR176C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
RFX1YLR176C RDH54P38086 958 aa2.79□□□□□ -1.96
RFX1YLR176C ATG14P38270 344 aa2.79□□□□□ -1.96
RFX1YLR176C SNU71P53207 620 aaKnown RBP2.79□□□□□ -1.96
RFX1YLR176C GIC2Q06648 383 aa2.79□□□□□ -1.96
RFX1YLR176C DED1P06634 604 aaKnown RBP2.79□□□□□ -1.96
RFX1YLR176C SEA4P38164 1038 aa2.79□□□□□ -1.96
RFX1YLR176C SAF1P38352 637 aa2.79□□□□□ -1.96
RFX1YLR176C YAR028WP39548 234 aa2.79□□□□□ -1.96
RFX1YLR176C MSH4P40965 878 aaPredicted RBP2.79□□□□□ -1.96
RFX1YLR176C MRL1Q06815 381 aa2.79□□□□□ -1.96
RFX1YLR176C YLR122CQ12312 125 aa2.79□□□□□ -1.96
RFX1YLR176C GCR1P07261 785 aa2.78□□□□□ -1.96
RFX1YLR176C RMD1Q03441 430 aa2.78□□□□□ -1.96
RFX1YLR176C EST2Q06163 884 aa2.78□□□□□ -1.96
RFX1YLR176C HDA2Q06629 674 aa2.78□□□□□ -1.96
RFX1YLR176C SBP1P10080 294 aaKnown RBP2.78□□□□□ -1.97
RFX1YLR176C CHS2P14180 963 aa2.78□□□□□ -1.97
RFX1YLR176C ADD66P36040 267 aa2.78□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 75.9 ms