RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W TOP1P04786 769 aa5.33□□□□□ -1.56
CBF5YLR175W TRL1P09880 827 aaKnown RBP5.33□□□□□ -1.56
CBF5YLR175W SLY41P22215 453 aa5.33□□□□□ -1.56
CBF5YLR175W MSM1P22438 575 aa5.33□□□□□ -1.56
CBF5YLR175W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
CBF5YLR175W OPY1P38271 328 aa5.33□□□□□ -1.56
CBF5YLR175W APL6P46682 809 aa5.33□□□□□ -1.56
CBF5YLR175W BIO2P32451 375 aa5.32□□□□□ -1.56
CBF5YLR175W AFG2P32794 780 aa5.32□□□□□ -1.56
CBF5YLR175W RSC30P38781 883 aa5.32□□□□□ -1.56
CBF5YLR175W YJL171CP46992 396 aa5.32□□□□□ -1.56
CBF5YLR175W PUS6P53294 404 aa5.32□□□□□ -1.56
CBF5YLR175W SUB2Q07478 446 aaKnown RBP5.32□□□□□ -1.56
CBF5YLR175W NCR1Q12200 1170 aa5.32□□□□□ -1.56
CBF5YLR175W FLO11P08640 1367 aa5.32□□□□□ -1.56
CBF5YLR175W FLO1P32768 1537 aa5.32□□□□□ -1.56
CBF5YLR175W RNR2P09938 399 aaKnown RBP5.32□□□□□ -1.56
CBF5YLR175W SSA4P22202 642 aaKnown RBP5.32□□□□□ -1.56
CBF5YLR175W RPS7AP26786 190 aaKnown RBP5.32□□□□□ -1.56
CBF5YLR175W MDL2P33311 773 aa5.32□□□□□ -1.56
CBF5YLR175W CRG1P38892 291 aaRIP-Chip data5.32□□□□□ -1.56not detected
CBF5YLR175W AIM9P40053 627 aaKnown RBP5.32□□□□□ -1.56
CBF5YLR175W GSM1P42950 618 aa5.32□□□□□ -1.56
CBF5YLR175W PIP2P52960 996 aa5.32□□□□□ -1.56
CBF5YLR175W SQS1P53866 767 aaKnown RBP5.32□□□□□ -1.56
CBF5YLR175W PPM2Q08282 695 aa5.32□□□□□ -1.56
CBF5YLR175W PCT1P13259 424 aa5.31□□□□□ -1.56
CBF5YLR175W COQ1P18900 473 aa5.31□□□□□ -1.56
CBF5YLR175W PEP3P27801 918 aa5.31□□□□□ -1.56
CBF5YLR175W RTG2P32608 588 aaKnown RBP5.31□□□□□ -1.56
CBF5YLR175W RTS1P38903 757 aa5.31□□□□□ -1.56
CBF5YLR175W MSH4P40965 878 aaPredicted RBP5.31□□□□□ -1.56
CBF5YLR175W YNL108CP53929 270 aa5.31□□□□□ -1.56
CBF5YLR175W SPN1Q06505 410 aaPredicted RBP5.31□□□□□ -1.56
CBF5YLR175W YDL129WQ07555 291 aa5.31□□□□□ -1.56
CBF5YLR175W ERG12P07277 443 aa5.3□□□□□ -1.56
CBF5YLR175W SUP45P12385 437 aaKnown RBP5.3□□□□□ -1.56
CBF5YLR175W SPT5P27692 1063 aaKnown RBP5.3□□□□□ -1.56
CBF5YLR175W RRP8P38961 392 aaKnown RBP5.3□□□□□ -1.56
CBF5YLR175W UTP7P40055 554 aaKnown RBP5.3□□□□□ -1.56
CBF5YLR175W MTC3P53077 123 aa5.3□□□□□ -1.56
CBF5YLR175W YGR117CP53270 476 aa5.3□□□□□ -1.56
CBF5YLR175W TIM50Q02776 476 aa5.3□□□□□ -1.56
CBF5YLR175W YLR278CQ05854 1341 aa5.3□□□□□ -1.56
CBF5YLR175W SRS2P12954 1174 aa5.29□□□□□ -1.56
CBF5YLR175W NUD1P32336 851 aa5.29□□□□□ -1.56
CBF5YLR175W CIC1P38779 376 aaKnown RBP5.29□□□□□ -1.56
CBF5YLR175W SLN1P39928 1220 aaPredicted RBP5.29□□□□□ -1.56
CBF5YLR175W NSG2P53898 299 aa5.29□□□□□ -1.56
CBF5YLR175W RPS15Q01855 142 aaKnown RBP5.29□□□□□ -1.56
CBF5YLR175W ECM23Q02710 187 aa5.29□□□□□ -1.56
CBF5YLR175W PCL8Q08966 492 aa5.29□□□□□ -1.56
CBF5YLR175W YPL260WQ08977 551 aa5.29□□□□□ -1.56
CBF5YLR175W LSP1Q12230 341 aaKnown RBP5.29□□□□□ -1.56
CBF5YLR175W CHO2P05374 869 aaKnown RBP5.28□□□□□ -1.56
CBF5YLR175W MAK16P10962 306 aaPredicted RBP5.28□□□□□ -1.56
CBF5YLR175W KEX2P13134 814 aa5.28□□□□□ -1.56
CBF5YLR175W RER2P35196 286 aa5.28□□□□□ -1.56
CBF5YLR175W MYO3P36006 1272 aa5.28□□□□□ -1.56
CBF5YLR175W FET4P40988 552 aa5.28□□□□□ -1.56
CBF5YLR175W UFD2P54860 961 aa5.28□□□□□ -1.56
CBF5YLR175W TRM44Q02648 567 aaKnown RBP5.28□□□□□ -1.56
CBF5YLR175W RAD61Q99359 647 aa5.28□□□□□ -1.56
CBF5YLR175W MATALPHA2P0CY08 210 aa5.27□□□□□ -1.57
CBF5YLR175W HMLALPHA2P0CY09 210 aa5.27□□□□□ -1.57
CBF5YLR175W TRM1P15565 570 aaKnown RBP5.27□□□□□ -1.57
CBF5YLR175W IMP2'P32351 346 aa5.27□□□□□ -1.57
CBF5YLR175W FBP26P32604 452 aa5.27□□□□□ -1.57
CBF5YLR175W TTI1P36097 1038 aa5.27□□□□□ -1.57
CBF5YLR175W STV1P37296 890 aa5.27□□□□□ -1.57
CBF5YLR175W YHL050CP38721 697 aa5.27□□□□□ -1.57
CBF5YLR175W PES4P39684 611 aa5.27□□□□□ -1.57
CBF5YLR175W KRI1P42846 591 aaKnown RBP5.27□□□□□ -1.57
CBF5YLR175W EMP47P43555 445 aa5.27□□□□□ -1.57
CBF5YLR175W ARH1P48360 493 aa5.27□□□□□ -1.57
CBF5YLR175W VPS4P52917 437 aa5.27□□□□□ -1.57
CBF5YLR175W HAP5Q02516 242 aa5.27□□□□□ -1.57
CBF5YLR175W SEN54Q02825 467 aaPredicted RBP5.27□□□□□ -1.57
CBF5YLR175W MRD1Q06106 887 aaKnown RBP5.27□□□□□ -1.57
CBF5YLR175W EST2Q06163 884 aa5.27□□□□□ -1.57
CBF5YLR175W KEL3Q08979 651 aaPredicted RBP5.27□□□□□ -1.57
CBF5YLR175W GSC2P40989 1895 aa5.27□□□□□ -1.57
CBF5YLR175W PDR1P12383 1068 aa5.26□□□□□ -1.57
CBF5YLR175W YDJ1P25491 409 aaKnown RBP5.26□□□□□ -1.57
CBF5YLR175W IME2P32581 645 aa5.26□□□□□ -1.57
CBF5YLR175W ANP1P32629 500 aa5.26□□□□□ -1.57
CBF5YLR175W SIS2P36024 562 aa5.26□□□□□ -1.57
CBF5YLR175W ERF2Q06551 359 aa5.26□□□□□ -1.57
CBF5YLR175W PSK2Q08217 1101 aa5.26□□□□□ -1.57
CBF5YLR175W PGA3Q12746 312 aaKnown RBP5.26□□□□□ -1.57
CBF5YLR175W THS1P04801 734 aaKnown RBP5.26□□□□□ -1.57
CBF5YLR175W HPR1P17629 752 aaKnown RBP5.26□□□□□ -1.57
CBF5YLR175W PRE8P23639 250 aa5.26□□□□□ -1.57
CBF5YLR175W VPS24P36095 224 aaKnown RBP5.26□□□□□ -1.57
CBF5YLR175W YHL017WP38745 532 aa5.26□□□□□ -1.57
CBF5YLR175W VID27P40157 782 aa5.26□□□□□ -1.57
CBF5YLR175W YKE2P52553 114 aa5.26□□□□□ -1.57
CBF5YLR175W VPS20Q04272 221 aa5.26□□□□□ -1.57
CBF5YLR175W SKG3Q06315 1026 aa5.26□□□□□ -1.57
CBF5YLR175W ESF1Q06344 628 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms