RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	KRE33	P53914	1056 aa	Known RBP	2.96	□□□□□ -1.94
RIC1	YLR039C	NOG1	Q02892	647 aa	Known RBP	2.96	□□□□□ -1.94
RIC1	YLR039C	TY1A-MR1	Q04215	440 aa		2.96	□□□□□ -1.94
RIC1	YLR039C	RTT10	Q08924	1013 aa		2.96	□□□□□ -1.94
RIC1	YLR039C	CDC53	Q12018	815 aa	Known RBP	2.96	□□□□□ -1.94
RIC1	YLR039C	TY1A-GR1	Q12085	440 aa		2.96	□□□□□ -1.94
RIC1	YLR039C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	2.96	□□□□□ -1.94
RIC1	YLR039C	TY1A-OL	Q92392	440 aa	Known RBP	2.96	□□□□□ -1.94
RIC1	YLR039C	SQT1	P35184	431 aa		2.96	□□□□□ -1.94
RIC1	YLR039C	SPF1	P39986	1215 aa	Known RBP	2.96	□□□□□ -1.94
RIC1	YLR039C	BUD6	P41697	788 aa		2.96	□□□□□ -1.94
RIC1	YLR039C	TY1A-DR2	Q03964	440 aa	Known RBP	2.96	□□□□□ -1.94
RIC1	YLR039C	FPR4	Q06205	392 aa	Predicted RBP	2.96	□□□□□ -1.94
RIC1	YLR039C	SEC23	P15303	768 aa	Known RBP	2.95	□□□□□ -1.94
RIC1	YLR039C	BAS1	P22035	811 aa		2.95	□□□□□ -1.94
RIC1	YLR039C	MET22	P32179	357 aa		2.95	□□□□□ -1.94
RIC1	YLR039C	STE5	P32917	917 aa		2.95	□□□□□ -1.94
RIC1	YLR039C	RDH54	P38086	958 aa		2.95	□□□□□ -1.94
RIC1	YLR039C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
RIC1	YLR039C	EXO5	P38289	585 aa		2.95	□□□□□ -1.94
RIC1	YLR039C	ADE12	P80210	433 aa	Known RBP	2.95	□□□□□ -1.94
RIC1	YLR039C	YMR265C	Q03508	461 aa	Known RBP	2.95	□□□□□ -1.94
RIC1	YLR039C	YLR346C	Q06139	101 aa		2.95	□□□□□ -1.94
RIC1	YLR039C	RAD4	P14736	754 aa		2.95	□□□□□ -1.94
RIC1	YLR039C	SEA4	P38164	1038 aa		2.95	□□□□□ -1.94
RIC1	YLR039C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
RIC1	YLR039C	TDA5	Q06417	326 aa	Known RBP	2.95	□□□□□ -1.94
RIC1	YLR039C	FAL1	Q12099	399 aa	Known RBP	2.95	□□□□□ -1.94
RIC1	YLR039C	RER2	P35196	286 aa		2.94	□□□□□ -1.94
RIC1	YLR039C	BRN1	P38170	754 aa		2.94	□□□□□ -1.94
RIC1	YLR039C	YIR007W	P40566	764 aa		2.94	□□□□□ -1.94
RIC1	YLR039C	ROD1	Q02805	837 aa		2.94	□□□□□ -1.94
RIC1	YLR039C	RPN4	Q03465	531 aa		2.94	□□□□□ -1.94
RIC1	YLR039C	LCB5	Q06147	687 aa	Known RBP	2.94	□□□□□ -1.94
RIC1	YLR039C	HTS1	P07263	546 aa	Known RBP	2.94	□□□□□ -1.94
RIC1	YLR039C	FPS1	P23900	669 aa		2.94	□□□□□ -1.94
RIC1	YLR039C	ABD1	P32783	436 aa	Predicted RBP	2.94	□□□□□ -1.94
RIC1	YLR039C	YHR020W	P38708	688 aa	Known RBP	2.94	□□□□□ -1.94
RIC1	YLR039C	YDR444W	Q04093	687 aa		2.94	□□□□□ -1.94
RIC1	YLR039C	TRP2	P00899	507 aa	Known RBP	2.94	□□□□□ -1.94
RIC1	YLR039C	MOT2	P34909	587 aa	Known RBP	2.94	□□□□□ -1.94
RIC1	YLR039C	TYW3	P53177	273 aa		2.94	□□□□□ -1.94
RIC1	YLR039C	GCR2	Q01722	534 aa		2.94	□□□□□ -1.94
RIC1	YLR039C	HEH2	Q03281	663 aa		2.94	□□□□□ -1.94
RIC1	YLR039C	DED1	P06634	604 aa	Known RBP	2.93	□□□□□ -1.94
RIC1	YLR039C	NEM1	P38757	446 aa		2.93	□□□□□ -1.94
RIC1	YLR039C	SLS1	P42900	643 aa		2.93	□□□□□ -1.94
RIC1	YLR039C	HAS1	Q03532	505 aa	Known RBP	2.93	□□□□□ -1.94
RIC1	YLR039C	YLR225C	Q05948	407 aa	Known RBP	2.93	□□□□□ -1.94
RIC1	YLR039C	RSC2	Q06488	889 aa		2.93	□□□□□ -1.94
RIC1	YLR039C	SYT1	Q06836	1226 aa		2.93	□□□□□ -1.94
RIC1	YLR039C	PPM2	Q08282	695 aa		2.93	□□□□□ -1.94
RIC1	YLR039C	SOG2	Q08817	791 aa		2.93	□□□□□ -1.94
RIC1	YLR039C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.93	□□□□□ -1.94	not detected
RIC1	YLR039C	PPG1	P32838	368 aa		2.93	□□□□□ -1.94
RIC1	YLR039C	TIM54	P47045	478 aa		2.93	□□□□□ -1.94
RIC1	YLR039C	YBR184W	P38299	523 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	FET4	P40988	552 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	YJL049W	P47048	450 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	LYS5	P50113	272 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	SOK2	P53438	785 aa	Predicted RBP	2.92	□□□□□ -1.94
RIC1	YLR039C	ALG12	P53730	551 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	SIW14	P53965	281 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	RAT1	Q02792	1006 aa	Known RBP	2.92	□□□□□ -1.94
RIC1	YLR039C	YDR461C-A	Q2V2P7	80 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	NMD2	P38798	1089 aa	Known RBP	2.92	□□□□□ -1.94
RIC1	YLR039C	CAF120	P53836	1060 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.92	□□□□□ -1.94	not detected
RIC1	YLR039C	MKK2	P32491	506 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	TIM23	P32897	222 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	NEO1	P40527	1151 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	YPL066W	Q12194	479 aa		2.92	□□□□□ -1.94
RIC1	YLR039C	NAN1	Q02931	896 aa	Known RBP	2.91	□□□□□ -1.94
RIC1	YLR039C	UTP5	Q04177	643 aa	Known RBP	2.91	□□□□□ -1.94
RIC1	YLR039C	VBA5	P36172	582 aa		2.91	□□□□□ -1.94
RIC1	YLR039C	ACO2	P39533	789 aa		2.91	□□□□□ -1.94
RIC1	YLR039C	TIF35	Q04067	274 aa	Known RBP	2.91	□□□□□ -1.94
RIC1	YLR039C	TMA46	Q12000	345 aa	Known RBP	2.91	□□□□□ -1.94
RIC1	YLR039C	RPP1A	P05318	106 aa	Predicted RBP	2.9	□□□□□ -1.94
RIC1	YLR039C	ERR1	P0CX10	437 aa		2.9	□□□□□ -1.94
RIC1	YLR039C	ERR2	P0CX11	437 aa		2.9	□□□□□ -1.94
RIC1	YLR039C	NAR1	P23503	491 aa	Known RBP	2.9	□□□□□ -1.94
RIC1	YLR039C	LYP1	P32487	611 aa		2.9	□□□□□ -1.94
RIC1	YLR039C	AFG2	P32794	780 aa		2.9	□□□□□ -1.94
RIC1	YLR039C	CEM1	P39525	442 aa		2.9	□□□□□ -1.94
RIC1	YLR039C	PFD1	P46988	109 aa		2.9	□□□□□ -1.94
RIC1	YLR039C	DOS2	P54858	310 aa		2.9	□□□□□ -1.94
RIC1	YLR039C	EST2	Q06163	884 aa		2.9	□□□□□ -1.94
RIC1	YLR039C	VMA4	P22203	233 aa	Known RBP	2.9	□□□□□ -1.95
RIC1	YLR039C	RAD27	P26793	382 aa		2.9	□□□□□ -1.95
RIC1	YLR039C	YKL077W	P36081	392 aa		2.9	□□□□□ -1.95
RIC1	YLR039C	PAN5	P38787	379 aa		2.9	□□□□□ -1.95
RIC1	YLR039C	NUP82	P40368	713 aa		2.9	□□□□□ -1.95
RIC1	YLR039C	TED1	P40533	473 aa		2.9	□□□□□ -1.95
RIC1	YLR039C	SPO74	P45819	413 aa		2.9	□□□□□ -1.95
RIC1	YLR039C	UTP22	P53254	1237 aa	Predicted RBP	2.9	□□□□□ -1.95
RIC1	YLR039C	YNR063W	P53749	607 aa		2.9	□□□□□ -1.95
RIC1	YLR039C	AOS1	Q06624	347 aa		2.9	□□□□□ -1.95
RIC1	YLR039C	YIG1	Q08956	461 aa		2.9	□□□□□ -1.95
RIC1	YLR039C	FLC1	Q08967	793 aa		2.9	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms