RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W RPS24AP0CX31 135 aaKnown RBP5.26□□□□□ -1.57
SSL1YLR005W RPS24BP0CX32 135 aaKnown RBP5.26□□□□□ -1.57
SSL1YLR005W PUS1Q12211 544 aaKnown RBP5.26□□□□□ -1.57
SSL1YLR005W RGP1P16664 663 aa5.25□□□□□ -1.57
SSL1YLR005W UBX7P38349 436 aa5.25□□□□□ -1.57
SSL1YLR005W MTO1P53070 669 aa5.25□□□□□ -1.57
SSL1YLR005W PHM7Q12252 991 aa5.25□□□□□ -1.57
SSL1YLR005W GPM1P00950 247 aaKnown RBP5.24□□□□□ -1.57
SSL1YLR005W NGR1P32831 672 aaKnown RBP5.24□□□□□ -1.57
SSL1YLR005W CHZ1P40019 153 aaPredicted RBP5.24□□□□□ -1.57
SSL1YLR005W VAN1P23642 535 aa5.23□□□□□ -1.57
SSL1YLR005W TY1A-DR2Q03964 440 aaKnown RBP5.23□□□□□ -1.57
SSL1YLR005W BUG1Q12191 341 aa5.23□□□□□ -1.57
SSL1YLR005W PUP1P25043 261 aa5.22□□□□□ -1.57
SSL1YLR005W HXT5P38695 592 aa5.22□□□□□ -1.57
SSL1YLR005W YML133CQ03099 1374 aa5.22□□□□□ -1.57
SSL1YLR005W YLL067CQ07888 1374 aa5.22□□□□□ -1.57
SSL1YLR005W YLL066CQ99208 1374 aa5.22□□□□□ -1.57
SSL1YLR005W RAD4P14736 754 aa5.21□□□□□ -1.58
SSL1YLR005W MSC7P38694 644 aa5.21□□□□□ -1.58
SSL1YLR005W LSB3P43603 459 aaKnown RBP5.21□□□□□ -1.58
SSL1YLR005W SAP155P43612 1002 aa5.21□□□□□ -1.58
SSL1YLR005W UTP22P53254 1237 aaPredicted RBP5.21□□□□□ -1.58
SSL1YLR005W YNR014WP53719 212 aa5.21□□□□□ -1.58
SSL1YLR005W TDA6Q06466 467 aa5.21□□□□□ -1.58
SSL1YLR005W SUV3P32580 737 aa5.2□□□□□ -1.58
SSL1YLR005W SEC3P33332 1336 aaKnown RBP5.19□□□□□ -1.58
SSL1YLR005W PDC5P16467 563 aaKnown RBP5.19□□□□□ -1.58
SSL1YLR005W KAP122P32767 1081 aa5.19□□□□□ -1.58
SSL1YLR005W SCD5P34758 872 aa5.19□□□□□ -1.58
SSL1YLR005W CWH41P53008 833 aa5.19□□□□□ -1.58
SSL1YLR005W ADE16P54113 591 aaKnown RBP5.19□□□□□ -1.58
SSL1YLR005W YML083CQ04526 418 aa5.19□□□□□ -1.58
SSL1YLR005W ATG13Q06628 738 aa5.19□□□□□ -1.58
SSL1YLR005W RPO41P13433 1351 aaKnown RBP5.18□□□□□ -1.58
SSL1YLR005W GRX1P25373 110 aaKnown RBP5.18□□□□□ -1.58
SSL1YLR005W BOI2P39969 1040 aa5.18□□□□□ -1.58
SSL1YLR005W YNR040WP53736 256 aa5.18□□□□□ -1.58
SSL1YLR005W UTP4Q06679 776 aaKnown RBP5.18□□□□□ -1.58
SSL1YLR005W TRS33Q99394 268 aa5.18□□□□□ -1.58
SSL1YLR005W MHP1P43638 1398 aa5.18□□□□□ -1.58
SSL1YLR005W GRX4P32642 244 aa5.17□□□□□ -1.58
SSL1YLR005W TOS1P38288 455 aa5.17□□□□□ -1.58
SSL1YLR005W QDR2P40474 542 aa5.17□□□□□ -1.58
SSL1YLR005W CUS1Q02554 436 aaPredicted RBP5.17□□□□□ -1.58
SSL1YLR005W YPR053CQ6Q5F3 151 aa5.17□□□□□ -1.58
SSL1YLR005W CTT1P06115 562 aa5.16□□□□□ -1.58
SSL1YLR005W KNS1P32350 737 aaPredicted RBP5.16□□□□□ -1.58
SSL1YLR005W YER156CP40093 338 aaKnown RBP5.16□□□□□ -1.58
SSL1YLR005W RRT14P40470 206 aa5.16□□□□□ -1.58
SSL1YLR005W YMR187CQ03236 431 aa5.16□□□□□ -1.58
SSL1YLR005W NOB1Q08444 459 aaKnown RBP5.16□□□□□ -1.58
SSL1YLR005W NAB2P32505 525 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
SSL1YLR005W YKL222CP35995 705 aa5.16□□□□□ -1.58
SSL1YLR005W YBR197CP38306 217 aa5.16□□□□□ -1.58
SSL1YLR005W EAF6P47128 113 aa5.16□□□□□ -1.58
SSL1YLR005W SKP1P52286 194 aa5.16□□□□□ -1.58
SSL1YLR005W TAP42Q04372 366 aa5.16□□□□□ -1.58
SSL1YLR005W PUN1Q06991 263 aa5.16□□□□□ -1.58
SSL1YLR005W UTP10P42945 1769 aaKnown RBP5.15□□□□□ -1.59
SSL1YLR005W RPP1AP05318 106 aaPredicted RBP5.15□□□□□ -1.59
SSL1YLR005W SSA4P22202 642 aaKnown RBP5.15□□□□□ -1.59
SSL1YLR005W NCL1P38205 684 aaKnown RBP5.15□□□□□ -1.59
SSL1YLR005W PRK1P40494 810 aa5.15□□□□□ -1.59
SSL1YLR005W RPS9BP05755 195 aaKnown RBP5.14□□□□□ -1.59
SSL1YLR005W RPC31P17890 251 aa5.14□□□□□ -1.59
SSL1YLR005W VMA3P25515 160 aa5.14□□□□□ -1.59
SSL1YLR005W MCX1P38323 520 aaPredicted RBP5.14□□□□□ -1.59
SSL1YLR005W APM2P38700 605 aa5.14□□□□□ -1.59
SSL1YLR005W CCT8P47079 568 aaKnown RBP5.14□□□□□ -1.59
SSL1YLR005W HEH2Q03281 663 aa5.14□□□□□ -1.59
SSL1YLR005W MRPL33P20084 86 aa5.13□□□□□ -1.59
SSL1YLR005W YCK2P23292 546 aaKnown RBP5.13□□□□□ -1.59
SSL1YLR005W MET1P36150 593 aa5.13□□□□□ -1.59
SSL1YLR005W ERT1P38140 529 aa5.13□□□□□ -1.59
SSL1YLR005W SLN1P39928 1220 aaPredicted RBP5.13□□□□□ -1.59
SSL1YLR005W INP54Q08227 384 aaKnown RBP5.13□□□□□ -1.59
SSL1YLR005W AUS1Q08409 1394 aa5.12□□□□□ -1.59
SSL1YLR005W ISC10P32645 267 aa5.12□□□□□ -1.59
SSL1YLR005W SKN7P38889 622 aa5.12□□□□□ -1.59
SSL1YLR005W YBP2P53169 641 aa5.12□□□□□ -1.59
SSL1YLR005W TOM1Q03280 3268 aa5.11□□□□□ -1.59
SSL1YLR005W OSM1P21375 501 aaKnown RBP5.11□□□□□ -1.59
SSL1YLR005W PGM2P37012 569 aaKnown RBP5.11□□□□□ -1.59
SSL1YLR005W ALG14P38242 237 aa5.11□□□□□ -1.59
SSL1YLR005W SQS1P53866 767 aaKnown RBP5.11□□□□□ -1.59
SSL1YLR005W MDG1P53885 366 aa5.11□□□□□ -1.59
SSL1YLR005W CTF4Q01454 927 aa5.11□□□□□ -1.59
SSL1YLR005W PUF6Q04373 656 aaKnown RBP5.11□□□□□ -1.59
SSL1YLR005W MRP10O75012 95 aa5.1□□□□□ -1.59
SSL1YLR005W BSD2P38356 321 aa5.1□□□□□ -1.59
SSL1YLR005W ITC1P53125 1264 aa5.1□□□□□ -1.59
SSL1YLR005W YDR215CQ12240 137 aa5.1□□□□□ -1.59
SSL1YLR005W LDH1P38139 375 aa5.09□□□□□ -1.59
SSL1YLR005W PRY1P47032 299 aa5.09□□□□□ -1.59
SSL1YLR005W CWC15Q03772 175 aaKnown RBP5.09□□□□□ -1.59
SSL1YLR005W MCA1Q08601 432 aa5.09□□□□□ -1.59
SSL1YLR005W SRS2P12954 1174 aa5.08□□□□□ -1.6
SSL1YLR005W PFF1P38244 976 aa5.08□□□□□ -1.6
SSL1YLR005W TPS3P38426 1054 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms