RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W CDC19P00549 500 aaKnown RBP7.55□□□□□ -1.2
PRP40YKL012W HEM13P11353 328 aaKnown RBP7.55□□□□□ -1.2
PRP40YKL012W IDI1P15496 288 aa7.55□□□□□ -1.2
PRP40YKL012W SHU2P38957 223 aa7.55□□□□□ -1.2
PRP40YKL012W HXT13P39924 564 aa7.55□□□□□ -1.2
PRP40YKL012W KRI1P42846 591 aaKnown RBP7.55□□□□□ -1.2
PRP40YKL012W HXT17P53631 564 aa7.55□□□□□ -1.2
PRP40YKL012W SIW14P53965 281 aa7.55□□□□□ -1.2
PRP40YKL012W HXT15P54854 567 aa7.55□□□□□ -1.2
PRP40YKL012W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
PRP40YKL012W GLO4Q12320 285 aa7.55□□□□□ -1.2
PRP40YKL012W AGP1P25376 633 aa7.54□□□□□ -1.2
PRP40YKL012W TIM23P32897 222 aa7.54□□□□□ -1.2
PRP40YKL012W MNN1P39106 762 aa7.54□□□□□ -1.2
PRP40YKL012W UBP2Q01476 1272 aa7.54□□□□□ -1.2
PRP40YKL012W SPO75Q07798 868 aa7.54□□□□□ -1.2
PRP40YKL012W TRP2P00899 507 aaKnown RBP7.54□□□□□ -1.2
PRP40YKL012W STE5P32917 917 aa7.54□□□□□ -1.2
PRP40YKL012W RDH54P38086 958 aa7.54□□□□□ -1.2
PRP40YKL012W YBR184WP38299 523 aa7.54□□□□□ -1.2
PRP40YKL012W ENT3P47160 408 aa7.54□□□□□ -1.2
PRP40YKL012W SHE9Q04172 456 aa7.54□□□□□ -1.2
PRP40YKL012W PHO8P11491 566 aa7.53□□□□□ -1.2
PRP40YKL012W RER2P35196 286 aa7.53□□□□□ -1.2
PRP40YKL012W RSP5P39940 809 aaKnown RBP7.53□□□□□ -1.2
PRP40YKL012W SPO20Q04359 397 aa7.53□□□□□ -1.2
PRP40YKL012W YLR125WQ12138 136 aa7.53□□□□□ -1.2
PRP40YKL012W HVG1P0CE11 249 aa7.52□□□□□ -1.21
PRP40YKL012W LYP1P32487 611 aa7.52□□□□□ -1.21
PRP40YKL012W INP51P40559 946 aaKnown RBP7.52□□□□□ -1.21
PRP40YKL012W HEH2Q03281 663 aa7.52□□□□□ -1.21
PRP40YKL012W OSH2Q12451 1283 aa7.52□□□□□ -1.21
PRP40YKL012W YGR125WP53273 1036 aa7.51□□□□□ -1.21
PRP40YKL012W UTP14Q04500 899 aaKnown RBP7.51□□□□□ -1.21
PRP40YKL012W VMA4P22203 233 aaKnown RBP7.51□□□□□ -1.21
PRP40YKL012W TSR4P25040 408 aa7.51□□□□□ -1.21
PRP40YKL012W SBA1P28707 216 aaKnown RBP7.51□□□□□ -1.21
PRP40YKL012W MRP8P35719 219 aa7.51□□□□□ -1.21
PRP40YKL012W SEA4P38164 1038 aa7.51□□□□□ -1.21
PRP40YKL012W EXO5P38289 585 aa7.51□□□□□ -1.21
PRP40YKL012W IRR1P40541 1150 aa7.51□□□□□ -1.21
PRP40YKL012W BIO5P53744 561 aaKnown RBP7.51□□□□□ -1.21
PRP40YKL012W REC8Q12188 680 aa7.51□□□□□ -1.21
PRP40YKL012W RPL8BP29453 256 aaKnown RBP7.5□□□□□ -1.21
PRP40YKL012W AMN1P38285 549 aaPredicted RBP7.5□□□□□ -1.21
PRP40YKL012W YJL181WP46987 611 aa7.5□□□□□ -1.21
PRP40YKL012W YGR161W-CQ3E744 92 aa7.5□□□□□ -1.21
PRP40YKL012W ABD1P32783 436 aaPredicted RBP7.49□□□□□ -1.21
PRP40YKL012W TFA2P36145 328 aa7.49□□□□□ -1.21
PRP40YKL012W VBA5P36172 582 aa7.49□□□□□ -1.21
PRP40YKL012W OSH7P38755 437 aa7.49□□□□□ -1.21
PRP40YKL012W YJR124CP47159 448 aa7.49□□□□□ -1.21
PRP40YKL012W FMP25Q08023 583 aa7.49□□□□□ -1.21
PRP40YKL012W HSP60P19882 572 aaKnown RBP7.48□□□□□ -1.21
PRP40YKL012W YKL077WP36081 392 aa7.48□□□□□ -1.21
PRP40YKL012W GGA2P38817 585 aaKnown RBP7.48□□□□□ -1.21
PRP40YKL012W YLR225CQ05948 407 aaKnown RBP7.48□□□□□ -1.21
PRP40YKL012W ESC2Q06340 456 aa7.48□□□□□ -1.21
PRP40YKL012W GAL11P19659 1081 aa7.48□□□□□ -1.21
PRP40YKL012W MSC7P38694 644 aa7.48□□□□□ -1.21
PRP40YKL012W YJR142WP47173 342 aa7.48□□□□□ -1.21
PRP40YKL012W YNR065CP53751 1116 aa7.48□□□□□ -1.21
PRP40YKL012W ROD1Q02805 837 aa7.48□□□□□ -1.21
PRP40YKL012W CAN1P04817 590 aa7.47□□□□□ -1.21
PRP40YKL012W HTS1P07263 546 aaKnown RBP7.47□□□□□ -1.21
PRP40YKL012W PFD1P46988 109 aa7.47□□□□□ -1.21
PRP40YKL012W YGL081WP53156 320 aa7.47□□□□□ -1.21
PRP40YKL012W YLR346CQ06139 101 aa7.47□□□□□ -1.21
PRP40YKL012W SOG2Q08817 791 aa7.47□□□□□ -1.21
PRP40YKL012W CIT1P00890 479 aa7.46□□□□□ -1.21
PRP40YKL012W SBP1P10080 294 aaKnown RBP7.46□□□□□ -1.21
PRP40YKL012W THI4P32318 326 aa7.46□□□□□ -1.21
PRP40YKL012W PBY1P38254 753 aa7.46□□□□□ -1.21
PRP40YKL012W ERP6P53198 216 aa7.46□□□□□ -1.21
PRP40YKL012W OPT2Q06593 877 aa7.46□□□□□ -1.21
PRP40YKL012W ERR1P0CX10 437 aa7.46□□□□□ -1.22
PRP40YKL012W ERR2P0CX11 437 aa7.46□□□□□ -1.22
PRP40YKL012W MKK2P32491 506 aa7.46□□□□□ -1.22
PRP40YKL012W FET4P40988 552 aa7.46□□□□□ -1.22
PRP40YKL012W LSB6P42951 607 aa7.46□□□□□ -1.22
PRP40YKL012W NAM8Q00539 523 aaKnown RBP7.46□□□□□ -1.22
PRP40YKL012W EAF1Q06337 982 aa7.46□□□□□ -1.22
PRP40YKL012W DPS1P04802 557 aaKnown RBP7.45□□□□□ -1.22
PRP40YKL012W TOM20P35180 183 aa7.45□□□□□ -1.22
PRP40YKL012W MSH4P40965 878 aaPredicted RBP7.45□□□□□ -1.22
PRP40YKL012W EST2Q06163 884 aa7.45□□□□□ -1.22
PRP40YKL012W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
PRP40YKL012W TY1A-LR4P0C2I8 440 aaKnown RBP7.44□□□□□ -1.22
PRP40YKL012W TY1A-DR6P0CX70 440 aa7.44□□□□□ -1.22
PRP40YKL012W TY1A-ER1P0CX71 440 aa7.44□□□□□ -1.22
PRP40YKL012W TY1A-LR2P0CX72 440 aa7.44□□□□□ -1.22
PRP40YKL012W TY1A-PLP0CX73 440 aa7.44□□□□□ -1.22
PRP40YKL012W TY1A-JR1P0CX74 440 aa7.44□□□□□ -1.22
PRP40YKL012W TY1A-LR3P0CX75 440 aa7.44□□□□□ -1.22
PRP40YKL012W TY1A-ML2P0CX76 440 aa7.44□□□□□ -1.22
PRP40YKL012W GRX4P32642 244 aa7.44□□□□□ -1.22
PRP40YKL012W UTP8P53276 713 aaKnown RBP7.44□□□□□ -1.22
PRP40YKL012W TY1A-GR1Q12085 440 aa7.44□□□□□ -1.22
PRP40YKL012W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.44□□□□□ -1.22
PRP40YKL012W TY1A-OLQ92392 440 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 142.2 ms