RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W YBL113CQ7M4S9 792 aa6.89□□□□□ -1.31
CBF1YJR060W RPO41P13433 1351 aaKnown RBP6.89□□□□□ -1.31
CBF1YJR060W YBR197CP38306 217 aa6.88□□□□□ -1.31
CBF1YJR060W XKS1P42826 600 aa6.88□□□□□ -1.31
CBF1YJR060W KAR2P16474 682 aaKnown RBP6.87□□□□□ -1.31
CBF1YJR060W UTP4Q06679 776 aaKnown RBP6.87□□□□□ -1.31
CBF1YJR060W YEF3P16521 1044 aaKnown RBP6.86□□□□□ -1.31
CBF1YJR060W SEC20P28791 383 aa6.86□□□□□ -1.31
CBF1YJR060W ASF1P32447 279 aa6.86□□□□□ -1.31
CBF1YJR060W MEC3Q02574 474 aa6.86□□□□□ -1.31
CBF1YJR060W KAR5Q04746 504 aa6.86□□□□□ -1.31
CBF1YJR060W ISC10P32645 267 aa6.85□□□□□ -1.31
CBF1YJR060W PAM1P37304 830 aaKnown RBP6.85□□□□□ -1.31
CBF1YJR060W ERP5P38819 212 aa6.85□□□□□ -1.31
CBF1YJR060W MTO1P53070 669 aa6.85□□□□□ -1.31
CBF1YJR060W CUZ1P53899 274 aa6.85□□□□□ -1.31
CBF1YJR060W YRF1-4O13559 1382 aa6.84□□□□□ -1.31
CBF1YJR060W CCP1P00431 361 aa6.84□□□□□ -1.31
CBF1YJR060W FUR4P05316 633 aaKnown RBP6.84□□□□□ -1.31
CBF1YJR060W LEU1P07264 779 aaKnown RBP6.84□□□□□ -1.31
CBF1YJR060W YKL133CP36066 463 aa6.84□□□□□ -1.31
CBF1YJR060W MRPL16P38064 232 aa6.84□□□□□ -1.31
CBF1YJR060W YMR265CQ03508 461 aaKnown RBP6.84□□□□□ -1.31
CBF1YJR060W MRPL33P20084 86 aa6.83□□□□□ -1.32
CBF1YJR060W DIT1P21623 536 aa6.83□□□□□ -1.32
CBF1YJR060W PRP40P33203 583 aaKnown RBP6.83□□□□□ -1.32
CBF1YJR060W DOT5P40553 215 aa6.83□□□□□ -1.32
CBF1YJR060W STB3Q12427 513 aa6.83□□□□□ -1.32
CBF1YJR060W KAP122P32767 1081 aa6.82□□□□□ -1.32
CBF1YJR060W YJL181WP46987 611 aa6.82□□□□□ -1.32
CBF1YJR060W ALD2P47771 506 aa6.82□□□□□ -1.32
CBF1YJR060W VMA3P25515 160 aa6.81□□□□□ -1.32
CBF1YJR060W QDR2P40474 542 aa6.81□□□□□ -1.32
CBF1YJR060W RPN11P43588 306 aaKnown RBP6.81□□□□□ -1.32
CBF1YJR060W KRE33P53914 1056 aaKnown RBP6.81□□□□□ -1.32
CBF1YJR060W YPL062WQ02781 134 aa6.81□□□□□ -1.32
CBF1YJR060W HIM1Q06674 414 aa6.81□□□□□ -1.32
CBF1YJR060W MSC6Q08818 692 aaKnown RBP6.81□□□□□ -1.32
CBF1YJR060W UTP10P42945 1769 aaKnown RBP6.8□□□□□ -1.32
CBF1YJR060W RGP1P16664 663 aa6.8□□□□□ -1.32
CBF1YJR060W GRS1P38088 690 aaKnown RBP6.8□□□□□ -1.32
CBF1YJR060W CEM1P39525 442 aa6.8□□□□□ -1.32
CBF1YJR060W BOL3P39724 118 aa6.8□□□□□ -1.32
CBF1YJR060W LDH1P38139 375 aa6.79□□□□□ -1.32
CBF1YJR060W YHL050CP38721 697 aa6.79□□□□□ -1.32
CBF1YJR060W YHR219WP38900 624 aa6.79□□□□□ -1.32
CBF1YJR060W ADE12P80210 433 aaKnown RBP6.79□□□□□ -1.32
CBF1YJR060W CTF4Q01454 927 aa6.79□□□□□ -1.32
CBF1YJR060W RPP1AP05318 106 aaPredicted RBP6.78□□□□□ -1.32
CBF1YJR060W YKR075CP36155 307 aa6.78□□□□□ -1.32
CBF1YJR060W DYS1P38791 387 aa6.78□□□□□ -1.32
CBF1YJR060W SPR3P41901 512 aa6.78□□□□□ -1.32
CBF1YJR060W YGR035CP53222 116 aa6.78□□□□□ -1.32
CBF1YJR060W PAP2P53632 584 aaKnown RBP6.78□□□□□ -1.32
CBF1YJR060W ADE16P54113 591 aaKnown RBP6.78□□□□□ -1.32
CBF1YJR060W IOC4Q04213 475 aa6.78□□□□□ -1.32
CBF1YJR060W HPF1Q05164 967 aa6.78□□□□□ -1.32
CBF1YJR060W COBP00163 385 aa6.77□□□□□ -1.33
CBF1YJR060W TRL1P09880 827 aaKnown RBP6.77□□□□□ -1.33
CBF1YJR060W FPS1P23900 669 aa6.77□□□□□ -1.33
CBF1YJR060W BOI1P38041 980 aaKnown RBP6.77□□□□□ -1.33
CBF1YJR060W LYS5P50113 272 aa6.77□□□□□ -1.33
CBF1YJR060W LSO1Q3E827 93 aa6.77□□□□□ -1.33
CBF1YJR060W SPT7P35177 1332 aa6.76□□□□□ -1.33
CBF1YJR060W GLO3P38682 493 aaKnown RBP6.76□□□□□ -1.33
CBF1YJR060W DSD1P53095 428 aa6.76□□□□□ -1.33
CBF1YJR060W ATG13Q06628 738 aa6.76□□□□□ -1.33
CBF1YJR060W INP54Q08227 384 aaKnown RBP6.76□□□□□ -1.33
CBF1YJR060W YDR461C-AQ2V2P7 80 aa6.76□□□□□ -1.33
CBF1YJR060W RPC31P17890 251 aa6.75□□□□□ -1.33
CBF1YJR060W AKL1P38080 1108 aaKnown RBP6.75□□□□□ -1.33
CBF1YJR060W MDJ2P42834 146 aa6.75□□□□□ -1.33
CBF1YJR060W POL32P47110 350 aa6.75□□□□□ -1.33
CBF1YJR060W SUT1P53032 299 aaKnown RBP6.75□□□□□ -1.33
CBF1YJR060W CUS1Q02554 436 aaPredicted RBP6.75□□□□□ -1.33
CBF1YJR060W SYT1Q06836 1226 aa6.75□□□□□ -1.33
CBF1YJR060W NPR2P39923 615 aa6.74□□□□□ -1.33
CBF1YJR060W SKP1P52286 194 aa6.74□□□□□ -1.33
CBF1YJR060W ATG1P53104 897 aa6.74□□□□□ -1.33
CBF1YJR060W DPH6Q12429 685 aa6.74□□□□□ -1.33
CBF1YJR060W NUP145P49687 1317 aa6.74□□□□□ -1.33
CBF1YJR060W HSP104P31539 908 aaKnown RBP6.73□□□□□ -1.33
CBF1YJR060W NCL1P38205 684 aaKnown RBP6.73□□□□□ -1.33
CBF1YJR060W PPX1P38698 397 aa6.73□□□□□ -1.33
CBF1YJR060W QDR1P40475 563 aa6.73□□□□□ -1.33
CBF1YJR060W AOS1Q06624 347 aa6.73□□□□□ -1.33
CBF1YJR060W APC11Q12157 165 aa6.73□□□□□ -1.33
CBF1YJR060W LYS2P07702 1392 aa6.72□□□□□ -1.33
CBF1YJR060W GRX1P25373 110 aaKnown RBP6.72□□□□□ -1.33
CBF1YJR060W UGA2P38067 497 aa6.72□□□□□ -1.33
CBF1YJR060W APM2P38700 605 aa6.72□□□□□ -1.33
CBF1YJR060W FIR1P40020 876 aa6.72□□□□□ -1.33
CBF1YJR060W HXT8P40886 569 aa6.72□□□□□ -1.33
CBF1YJR060W YOR296WQ08748 1289 aa6.72□□□□□ -1.33
CBF1YJR060W RAD4P14736 754 aa6.71□□□□□ -1.34
CBF1YJR060W RPB10P22139 70 aa6.71□□□□□ -1.34
CBF1YJR060W MSN1P22148 382 aa6.71□□□□□ -1.34
CBF1YJR060W GIP1P38229 639 aa6.71□□□□□ -1.34
CBF1YJR060W YBP2P53169 641 aa6.71□□□□□ -1.34
CBF1YJR060W ATE1P16639 503 aa6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms