RNA–Protein interactions for RNA: YJL100W

LSB6, Transcript of Type II phosphatidylinositol 4-kinase, yeast

Gene LSB6, Length 1,824 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB6	YJL100W	TLG2	Q08144	397 aa		10.12	□□□□□ -0.79
LSB6	YJL100W	YKL068W-A	Q3E826	78 aa		10.12	□□□□□ -0.79
LSB6	YJL100W	KRE2	P27809	442 aa		10.11	□□□□□ -0.79
LSB6	YJL100W	CLB5	P30283	435 aa		10.11	□□□□□ -0.79
LSB6	YJL100W	MGA2	P40578	1113 aa		10.11	□□□□□ -0.79
LSB6	YJL100W	YIR042C	P40586	236 aa		10.11	□□□□□ -0.79
LSB6	YJL100W	IRC8	P47046	822 aa		10.11	□□□□□ -0.79
LSB6	YJL100W	ENP2	P48234	707 aa	Known RBP	10.11	□□□□□ -0.79
LSB6	YJL100W	UBC1	P21734	215 aa	Known RBP	10.1	□□□□□ -0.79
LSB6	YJL100W	SPC110	P32380	944 aa		10.1	□□□□□ -0.79
LSB6	YJL100W	YKU70	P32807	602 aa		10.1	□□□□□ -0.79
LSB6	YJL100W	SMC3	P47037	1230 aa		10.1	□□□□□ -0.79
LSB6	YJL100W	APT1	P49435	187 aa	Known RBP	10.1	□□□□□ -0.79
LSB6	YJL100W	UBX2	Q04228	584 aa		10.1	□□□□□ -0.79
LSB6	YJL100W	GET3	Q12154	354 aa	Known RBP	10.1	□□□□□ -0.79
LSB6	YJL100W	PHO13	P19881	312 aa		10.1	□□□□□ -0.79
LSB6	YJL100W	MSH3	P25336	1018 aa		10.1	□□□□□ -0.79
LSB6	YJL100W	RPT3	P33298	428 aa	Known RBP	10.1	□□□□□ -0.79
LSB6	YJL100W	SEC9	P40357	651 aa		10.1	□□□□□ -0.79
LSB6	YJL100W	PIF1	P07271	859 aa		10.09	□□□□□ -0.79
LSB6	YJL100W	ICL1	P28240	557 aa	Predicted RBP	10.09	□□□□□ -0.79
LSB6	YJL100W	SEC65	P29478	273 aa		10.09	□□□□□ -0.79
LSB6	YJL100W	PXL1	P36166	706 aa		10.09	□□□□□ -0.79
LSB6	YJL100W	CAF130	P53280	1122 aa	Predicted RBP	10.09	□□□□□ -0.79
LSB6	YJL100W	RPT4	P53549	437 aa	Known RBP	10.09	□□□□□ -0.79
LSB6	YJL100W	INM2	Q05533	292 aa		10.09	□□□□□ -0.79
LSB6	YJL100W	TFC6	Q06339	672 aa		10.09	□□□□□ -0.79
LSB6	YJL100W	CSC1	Q06538	782 aa		10.09	□□□□□ -0.79
LSB6	YJL100W	PMD1	P32634	1753 aa		10.08	□□□□□ -0.8
LSB6	YJL100W	RET1	P22276	1149 aa	Known RBP	10.08	□□□□□ -0.8
LSB6	YJL100W	ADE17	P38009	592 aa	Known RBP	10.08	□□□□□ -0.8
LSB6	YJL100W	CUE3	P53137	624 aa	Known RBP	10.08	□□□□□ -0.8
LSB6	YJL100W	PTC5	Q12511	572 aa		10.08	□□□□□ -0.8
LSB6	YJL100W	BMH2	P34730	273 aa	Known RBP	10.07	□□□□□ -0.8
LSB6	YJL100W	SPT21	P35209	758 aa		10.07	□□□□□ -0.8
LSB6	YJL100W	SHM1	P37292	490 aa	Predicted RBP	10.07	□□□□□ -0.8
LSB6	YJL100W	SPL2	P38839	148 aa		10.07	□□□□□ -0.8
LSB6	YJL100W	RRP8	P38961	392 aa	Known RBP	10.07	□□□□□ -0.8
LSB6	YJL100W	UFD2	P54860	961 aa		10.07	□□□□□ -0.8
LSB6	YJL100W	HCR1	Q05775	265 aa	Known RBP	10.07	□□□□□ -0.8
LSB6	YJL100W	YOL098C	Q12496	1037 aa		10.07	□□□□□ -0.8
LSB6	YJL100W	RPS9B	P05755	195 aa	Known RBP	10.07	□□□□□ -0.8
LSB6	YJL100W	STO1	P34160	861 aa	Known RBP	10.07	□□□□□ -0.8
LSB6	YJL100W	REI1	P38344	393 aa	Predicted RBP	10.07	□□□□□ -0.8
LSB6	YJL100W	TIF4632	P39936	914 aa	Known RBP	10.07	□□□□□ -0.8
LSB6	YJL100W	GFD1	Q04839	188 aa	Known RBP	10.07	□□□□□ -0.8
LSB6	YJL100W	TOP1	P04786	769 aa		10.06	□□□□□ -0.8
LSB6	YJL100W	STE11	P23561	717 aa		10.06	□□□□□ -0.8
LSB6	YJL100W	DEP1	P31385	405 aa		10.06	□□□□□ -0.8
LSB6	YJL100W	YET1	P35723	206 aa		10.06	□□□□□ -0.8
LSB6	YJL100W	RPS15	Q01855	142 aa	Known RBP	10.06	□□□□□ -0.8
LSB6	YJL100W	GYL1	Q04322	720 aa		10.06	□□□□□ -0.8
LSB6	YJL100W	RBA50	Q04418	439 aa		10.06	□□□□□ -0.8
LSB6	YJL100W	CAJ1	P39101	391 aa		10.05	□□□□□ -0.8
LSB6	YJL100W	LSC2	P53312	427 aa		10.05	□□□□□ -0.8
LSB6	YJL100W	EIS1	Q05050	843 aa	Known RBP	10.05	□□□□□ -0.8
LSB6	YJL100W	RPS6A	P0CX37	236 aa	Known RBP	10.05	□□□□□ -0.8
LSB6	YJL100W	RPS6B	P0CX38	236 aa	Predicted RBP	10.05	□□□□□ -0.8
LSB6	YJL100W	IRC4	Q03036	179 aa		10.05	□□□□□ -0.8
LSB6	YJL100W	VPS38	Q05919	439 aa		10.05	□□□□□ -0.8
LSB6	YJL100W	PSR2	Q07949	397 aa		10.05	□□□□□ -0.8
LSB6	YJL100W	ATG9	Q12142	997 aa		10.05	□□□□□ -0.8
LSB6	YJL100W	PSF3	Q12146	194 aa		10.05	□□□□□ -0.8
LSB6	YJL100W	CLB1	P24868	471 aa		10.04	□□□□□ -0.8
LSB6	YJL100W	LCB1	P25045	558 aa	Known RBP	10.04	□□□□□ -0.8
LSB6	YJL100W	MSH1	P25846	959 aa		10.04	□□□□□ -0.8
LSB6	YJL100W	SPT8	P38915	602 aa		10.04	□□□□□ -0.8
LSB6	YJL100W	VPS41	P38959	992 aa		10.04	□□□□□ -0.8
LSB6	YJL100W	CCC2	P38995	1004 aa		10.04	□□□□□ -0.8
LSB6	YJL100W	CSM2	P40465	213 aa		10.04	□□□□□ -0.8
LSB6	YJL100W	PCI8	P40512	444 aa		10.04	□□□□□ -0.8
LSB6	YJL100W	MVP1	P40959	511 aa	Known RBP	10.04	□□□□□ -0.8
LSB6	YJL100W	SML1	Q04964	104 aa		10.04	□□□□□ -0.8
LSB6	YJL100W	MMR1	Q06324	491 aa		10.04	□□□□□ -0.8
LSB6	YJL100W	GIN4	Q12263	1142 aa		10.04	□□□□□ -0.8
LSB6	YJL100W	RPL22A	P05749	121 aa	Known RBP	10.03	□□□□□ -0.8
LSB6	YJL100W	SSA1	P10591	642 aa	Known RBP	10.03	□□□□□ -0.8
LSB6	YJL100W	SHC1	P39000	512 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	JJJ2	P46997	583 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	YGR237C	P50089	785 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	YGL140C	P53120	1219 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	MRS2	Q01926	470 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	YOR111W	Q99210	232 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	CDC37	P06101	506 aa	Known RBP	10.03	□□□□□ -0.8
LSB6	YJL100W	BMH1	P29311	267 aa	Known RBP	10.03	□□□□□ -0.8
LSB6	YJL100W	ANP1	P32629	500 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	SAP190	P36123	1033 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	RXT2	P38255	430 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	GDT1	P38301	280 aa	Predicted RBP	10.03	□□□□□ -0.8
LSB6	YJL100W	SAP1	P39955	897 aa	Known RBP	10.03	□□□□□ -0.8
LSB6	YJL100W	NDC80	P40460	691 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	LYS14	P40971	790 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	IOC3	P43596	787 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	DPL1	Q05567	589 aa		10.03	□□□□□ -0.8
LSB6	YJL100W	YHL050C	P38721	697 aa		10.02	□□□□□ -0.81
LSB6	YJL100W	ALF1	P53904	254 aa		10.02	□□□□□ -0.81
LSB6	YJL100W	DPB3	P27344	201 aa		10.01	□□□□□ -0.81
LSB6	YJL100W	SQS1	P53866	767 aa	Known RBP	10.01	□□□□□ -0.81
LSB6	YJL100W	FAR11	P53917	953 aa		10.01	□□□□□ -0.81
LSB6	YJL100W	PRP42	Q03776	544 aa	Known RBP	10.01	□□□□□ -0.81

Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms