RNA–Protein interactions for RNA: YJL074C

SMC3, Transcript of Subunit of the multiprotein cohesin complex, yeast

Gene SMC3, Length 3,693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC3	YJL074C	SPO11	P23179	398 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	SPT16	P32558	1035 aa	Known RBP	3.8	□□□□□ -1.8
SMC3	YJL074C	ECM32	P32644	1121 aa	Known RBP	3.8	□□□□□ -1.8
SMC3	YJL074C	CNS1	P33313	385 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	STO1	P34160	861 aa	Known RBP	3.8	□□□□□ -1.8
SMC3	YJL074C	SEC9	P40357	651 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	MIC19	P43594	170 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
SMC3	YJL074C	HSP82	P02829	709 aa	Known RBP	3.8	□□□□□ -1.8
SMC3	YJL074C	RPA135	P22138	1203 aa	Known RBP	3.8	□□□□□ -1.8
SMC3	YJL074C	EFM2	P38347	419 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	VID28	P40547	921 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	ERG5	P54781	538 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	TLG1	Q03322	224 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	YDR338C	Q05497	695 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	NEW1	Q08972	1196 aa	Known RBP	3.8	□□□□□ -1.8
SMC3	YJL074C	DCS2	Q12123	353 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	OSH2	Q12451	1283 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	SEC14	P24280	304 aa	Known RBP	3.8	□□□□□ -1.8
SMC3	YJL074C	PEP3	P27801	918 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	HXT1	P32465	570 aa		3.8	□□□□□ -1.8
SMC3	YJL074C	TMA64	Q04600	565 aa	Known RBP	3.8	□□□□□ -1.8
SMC3	YJL074C	POB3	Q04636	552 aa	Known RBP	3.8	□□□□□ -1.8
SMC3	YJL074C	LAM4	P38800	1345 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	RPL17A	P05740	184 aa	Known RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	PDC1	P06169	563 aa	Known RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	MPH3	P0CE00	602 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	CDC10	P25342	322 aa	Known RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	SPT5	P27692	1063 aa	Known RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	BMH1	P29311	267 aa	Known RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	SPT8	P38915	602 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	CAJ1	P39101	391 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	RPL17B	P46990	184 aa	Known RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	PKH3	Q03306	898 aa	Predicted RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	RMD1	Q03441	430 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	ITT1	Q04638	464 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	VAC14	Q06708	880 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	GLC3	P32775	704 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	ADE17	P38009	592 aa	Known RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	PXR1	P53335	271 aa	Predicted RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	YML119W	Q03208	357 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	NGL3	Q03210	505 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	INP54	Q08227	384 aa	Known RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	PIF1	P07271	859 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	ZUO1	P32527	433 aa	Known RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	CIC1	P38779	376 aa	Known RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	STM1	P39015	273 aa	Known RBP	3.79	□□□□□ -1.8
SMC3	YJL074C	BUD6	P41697	788 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	RNH70	P53331	553 aa		3.79	□□□□□ -1.8
SMC3	YJL074C	GCG1	P32656	232 aa	Known RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.78	□□□□□ -1.8	not detected
SMC3	YJL074C	SHM1	P37292	490 aa	Predicted RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	PTC4	P38089	393 aa		3.78	□□□□□ -1.8
SMC3	YJL074C	BCD1	P38772	366 aa		3.78	□□□□□ -1.8
SMC3	YJL074C	NOC2	P39744	710 aa	Known RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	MRX1	P40050	688 aa		3.78	□□□□□ -1.8
SMC3	YJL074C	ZDS2	P54786	942 aa		3.78	□□□□□ -1.8
SMC3	YJL074C	CUS1	Q02554	436 aa	Predicted RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	MTC5	Q03897	1148 aa		3.78	□□□□□ -1.8
SMC3	YJL074C	ISW2	Q08773	1120 aa		3.78	□□□□□ -1.8
SMC3	YJL074C	PGA3	Q12746	312 aa	Known RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	MAK16	P10962	306 aa	Predicted RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	KEX2	P13134	814 aa		3.78	□□□□□ -1.8
SMC3	YJL074C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.78	□□□□□ -1.8	not detected
SMC3	YJL074C	DIT2	P21595	489 aa		3.78	□□□□□ -1.8
SMC3	YJL074C	URA1	P28272	314 aa	Predicted RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	SEC20	P28791	383 aa		3.78	□□□□□ -1.8
SMC3	YJL074C	CDC3	P32457	520 aa	Known RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	PDB1	P32473	366 aa	Known RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	NUP133	P36161	1157 aa		3.78	□□□□□ -1.8
SMC3	YJL074C	GFD1	Q04839	188 aa	Known RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	RUD3	Q12234	484 aa	Known RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	SSK22	P25390	1331 aa	Predicted RBP	3.78	□□□□□ -1.8
SMC3	YJL074C	SPT2	P06843	333 aa	Predicted RBP	3.77	□□□□□ -1.81
SMC3	YJL074C	CKI1	P20485	582 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	MRPS28	P21771	286 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	SSA4	P22202	642 aa	Known RBP	3.77	□□□□□ -1.81
SMC3	YJL074C	SMF1	P38925	575 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	TRS85	P46944	698 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	GRX3	Q03835	250 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	DPL1	Q05567	589 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	RRP15	Q06511	250 aa	Predicted RBP	3.77	□□□□□ -1.81
SMC3	YJL074C	GYP5	Q12344	894 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	FKS1	P38631	1876 aa	Known RBP	3.77	□□□□□ -1.81
SMC3	YJL074C	PBS2	P08018	668 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	NIP1	P32497	812 aa	Known RBP	3.77	□□□□□ -1.81
SMC3	YJL074C	ERP2	P39704	215 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	TIF4632	P39936	914 aa	Known RBP	3.77	□□□□□ -1.81
SMC3	YJL074C	FAF1	P40546	346 aa	Predicted RBP	3.77	□□□□□ -1.81
SMC3	YJL074C	TFB3	Q03290	321 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	KRS1	P15180	591 aa	Known RBP	3.77	□□□□□ -1.81
SMC3	YJL074C	HEL1	P36113	551 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	PPX1	P38698	397 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	ENT3	P47160	408 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	EIS1	Q05050	843 aa	Known RBP	3.77	□□□□□ -1.81
SMC3	YJL074C	ORM2	Q06144	216 aa		3.77	□□□□□ -1.81
SMC3	YJL074C	MAG2	Q06436	670 aa	Known RBP	3.77	□□□□□ -1.81
SMC3	YJL074C	RAD57	P25301	460 aa		3.76	□□□□□ -1.81
SMC3	YJL074C	PWP2	P25635	923 aa	Known RBP	3.76	□□□□□ -1.81
SMC3	YJL074C	RPL5	P26321	297 aa	Known RBP	3.76	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms