RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W ITC1P53125 1264 aa3.9□□□□□ -1.78
NSP1YJL041W IST1P53843 298 aaPredicted RBP3.9□□□□□ -1.78
NSP1YJL041W ASI1P54074 624 aa3.9□□□□□ -1.78
NSP1YJL041W ERB1Q04660 807 aaKnown RBP3.9□□□□□ -1.78
NSP1YJL041W PNP1Q05788 311 aa3.9□□□□□ -1.78
NSP1YJL041W ISR1Q06098 443 aaKnown RBP3.9□□□□□ -1.78
NSP1YJL041W PUN1Q06991 263 aa3.9□□□□□ -1.78
NSP1YJL041W TSR1Q07381 788 aaKnown RBP3.9□□□□□ -1.78
NSP1YJL041W SGT2Q12118 346 aaKnown RBP3.9□□□□□ -1.78
NSP1YJL041W REV3P14284 1504 aa3.9□□□□□ -1.78
NSP1YJL041W PDI1P17967 522 aaKnown RBP3.9□□□□□ -1.79
NSP1YJL041W SEC14P24280 304 aaKnown RBP3.9□□□□□ -1.79
NSP1YJL041W TBS1P38114 1094 aa3.9□□□□□ -1.79
NSP1YJL041W TIF5P38431 405 aaKnown RBP3.9□□□□□ -1.79
NSP1YJL041W SAP1P39955 897 aaKnown RBP3.9□□□□□ -1.79
NSP1YJL041W AIM9P40053 627 aaKnown RBP3.9□□□□□ -1.79
NSP1YJL041W HYR1P40581 163 aaKnown RBP3.9□□□□□ -1.79
NSP1YJL041W LEM3P42838 414 aa3.9□□□□□ -1.79
NSP1YJL041W LAM5P43560 674 aa3.9□□□□□ -1.79
NSP1YJL041W ROM1P53046 1155 aa3.9□□□□□ -1.79
NSP1YJL041W ATG1P53104 897 aa3.9□□□□□ -1.79
NSP1YJL041W UTP22P53254 1237 aaPredicted RBP3.9□□□□□ -1.79
NSP1YJL041W DSL1P53847 754 aa3.9□□□□□ -1.79
NSP1YJL041W SML1Q04964 104 aa3.9□□□□□ -1.79
NSP1YJL041W CDC31P06704 161 aaKnown RBP3.89□□□□□ -1.79
NSP1YJL041W AFT1P22149 690 aa3.89□□□□□ -1.79
NSP1YJL041W UBP1P25037 809 aa3.89□□□□□ -1.79
NSP1YJL041W CDC48P25694 835 aaKnown RBP3.89□□□□□ -1.79
NSP1YJL041W SWE1P32944 819 aa3.89□□□□□ -1.79
NSP1YJL041W COY1P34237 679 aa3.89□□□□□ -1.79
NSP1YJL041W POL31P46957 487 aa3.89□□□□□ -1.79
NSP1YJL041W SET2P46995 733 aaKnown RBP3.89□□□□□ -1.79
NSP1YJL041W PRP43P53131 767 aaKnown RBP3.89□□□□□ -1.79
NSP1YJL041W BNI5P53890 448 aaKnown RBP3.89□□□□□ -1.79
NSP1YJL041W FAR11P53917 953 aa3.89□□□□□ -1.79
NSP1YJL041W MSC6Q08818 692 aaKnown RBP3.89□□□□□ -1.79
NSP1YJL041W HSP42Q12329 375 aa3.89□□□□□ -1.79
NSP1YJL041W HMG1P12683 1054 aa3.89□□□□□ -1.79
NSP1YJL041W POL4P25615 582 aa3.89□□□□□ -1.79
NSP1YJL041W PIM1P36775 1133 aa3.89□□□□□ -1.79
NSP1YJL041W TAF5P38129 798 aa3.89□□□□□ -1.79
NSP1YJL041W SHC1P39000 512 aa3.89□□□□□ -1.79
NSP1YJL041W RGA1P39083 1007 aa3.89□□□□□ -1.79
NSP1YJL041W EMW1P42842 904 aaKnown RBP3.89□□□□□ -1.79
NSP1YJL041W ACF4P47129 309 aa3.89□□□□□ -1.79
NSP1YJL041W MSN5P52918 1224 aa3.89□□□□□ -1.79
NSP1YJL041W BTN2P53286 410 aa3.89□□□□□ -1.79
NSP1YJL041W HDA3Q06623 655 aa3.89□□□□□ -1.79
NSP1YJL041W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
NSP1YJL041W APC2Q12440 853 aa3.89□□□□□ -1.79
NSP1YJL041W TY3B-IQ7LHG5 1498 aaKnown RBP3.89□□□□□ -1.79
NSP1YJL041W MIP1P15801 1254 aa3.88□□□□□ -1.79
NSP1YJL041W ASH1P34233 588 aa3.88□□□□□ -1.79
NSP1YJL041W ATG14P38270 344 aa3.88□□□□□ -1.79
NSP1YJL041W ERP5P38819 212 aa3.88□□□□□ -1.79
NSP1YJL041W LIN1P38852 340 aaPredicted RBP3.88□□□□□ -1.79
NSP1YJL041W VPS8P39702 1274 aa3.88□□□□□ -1.79
NSP1YJL041W AIM21P40563 679 aa3.88□□□□□ -1.79
NSP1YJL041W BUD27P43573 796 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
NSP1YJL041W VTC3Q02725 835 aa3.88□□□□□ -1.79
NSP1YJL041W VPS5Q92331 675 aa3.88□□□□□ -1.79
NSP1YJL041W BRR1Q99177 341 aaPredicted RBP3.88□□□□□ -1.79
NSP1YJL041W ATG2P53855 1592 aa3.88□□□□□ -1.79
NSP1YJL041W NTH2P35172 780 aa3.88□□□□□ -1.79
NSP1YJL041W UIP5P36137 443 aa3.88□□□□□ -1.79
NSP1YJL041W MRPL40P36534 297 aa3.88□□□□□ -1.79
NSP1YJL041W ARB1P40024 610 aaKnown RBP3.88□□□□□ -1.79
NSP1YJL041W TAF1P46677 1066 aa3.88□□□□□ -1.79
NSP1YJL041W GYP7P48365 746 aa3.88□□□□□ -1.79
NSP1YJL041W PEX19Q07418 342 aa3.88□□□□□ -1.79
NSP1YJL041W CLF1Q12309 687 aaPredicted RBP3.88□□□□□ -1.79
NSP1YJL041W GDB1Q06625 1536 aa3.88□□□□□ -1.79
NSP1YJL041W CYT1P07143 309 aa3.87□□□□□ -1.79
NSP1YJL041W RPB4P20433 221 aaPredicted RBP3.87□□□□□ -1.79
NSP1YJL041W UTR2P32623 467 aa3.87□□□□□ -1.79
NSP1YJL041W SEC9P40357 651 aa3.87□□□□□ -1.79
NSP1YJL041W GPD2P41911 440 aaKnown RBP3.87□□□□□ -1.79
NSP1YJL041W ITT1Q04638 464 aa3.87□□□□□ -1.79
NSP1YJL041W HEL2Q05580 639 aaKnown RBP3.87□□□□□ -1.79
NSP1YJL041W MRD1Q06106 887 aaKnown RBP3.87□□□□□ -1.79
NSP1YJL041W ATG26Q06321 1198 aa3.87□□□□□ -1.79
NSP1YJL041W NAT1P12945 854 aaKnown RBP3.87□□□□□ -1.79
NSP1YJL041W TAL1P15019 335 aaKnown RBP3.87□□□□□ -1.79
NSP1YJL041W MKS1P34072 584 aa3.87□□□□□ -1.79
NSP1YJL041W NOC2P39744 710 aaKnown RBP3.87□□□□□ -1.79
NSP1YJL041W SPR3P41901 512 aa3.87□□□□□ -1.79
NSP1YJL041W RSC1P53236 928 aa3.87□□□□□ -1.79
NSP1YJL041W ORC1P54784 914 aaPredicted RBP3.87□□□□□ -1.79
NSP1YJL041W ISU1Q03020 165 aa3.87□□□□□ -1.79
NSP1YJL041W DNL4Q08387 944 aaPredicted RBP3.87□□□□□ -1.79
NSP1YJL041W SFI1Q12369 946 aa3.87□□□□□ -1.79
NSP1YJL041W HIR3P47171 1648 aa3.87□□□□□ -1.79
NSP1YJL041W YOR1P53049 1477 aa3.87□□□□□ -1.79
NSP1YJL041W RPS6AP0CX37 236 aaKnown RBP3.86□□□□□ -1.79
NSP1YJL041W RPS6BP0CX38 236 aaPredicted RBP3.86□□□□□ -1.79
NSP1YJL041W MCM1P11746 286 aa3.86□□□□□ -1.79
NSP1YJL041W FBP26P32604 452 aa3.86□□□□□ -1.79
NSP1YJL041W MRT4P33201 236 aaKnown RBP3.86□□□□□ -1.79
NSP1YJL041W SAS3P34218 831 aa3.86□□□□□ -1.79
NSP1YJL041W MRP8P35719 219 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms