RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W TY1A-PR2P0CX60 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-DR5P0CX65 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-ER2P0CX66 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-GR3P0CX67 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-LR1P0CX68 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-MR2P0CX69 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-JR2P47099 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-DR1Q03856 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-ML1Q04706 440 aaKnown RBP7.8□□□□□ -1.16
PRE3YJL001W GYP1Q08484 637 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-BRQ12217 440 aa7.8□□□□□ -1.16
PRE3YJL001W MCM16Q12262 181 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-NL2Q12470 440 aa7.8□□□□□ -1.16
PRE3YJL001W TY1A-GR2Q12485 440 aa7.8□□□□□ -1.16
PRE3YJL001W SEC2P17065 759 aa7.79□□□□□ -1.16
PRE3YJL001W NIT1P40447 199 aa7.79□□□□□ -1.16
PRE3YJL001W ACK1Q07622 623 aaPredicted RBP7.79□□□□□ -1.16
PRE3YJL001W BUD20Q08004 166 aaPredicted RBP7.79□□□□□ -1.16
PRE3YJL001W PUP1P25043 261 aa7.78□□□□□ -1.16
PRE3YJL001W ASH1P34233 588 aa7.78□□□□□ -1.16
PRE3YJL001W RPA14P50106 137 aa7.78□□□□□ -1.16
PRE3YJL001W SRT1Q03175 343 aa7.78□□□□□ -1.16
PRE3YJL001W PSH1Q12161 406 aa7.78□□□□□ -1.16
PRE3YJL001W MRP7P12687 371 aa7.77□□□□□ -1.17
PRE3YJL001W GAL2P13181 574 aa7.77□□□□□ -1.17
PRE3YJL001W HEF3P53978 1044 aaKnown RBP7.77□□□□□ -1.17
PRE3YJL001W YLR225CQ05948 407 aaKnown RBP7.77□□□□□ -1.17
PRE3YJL001W SGD1Q06132 899 aa7.77□□□□□ -1.17
PRE3YJL001W WRS1Q12109 432 aaKnown RBP7.77□□□□□ -1.17
PRE3YJL001W TGL4P36165 910 aa7.76□□□□□ -1.17
PRE3YJL001W MPP10P47083 593 aaKnown RBP7.76□□□□□ -1.17
PRE3YJL001W MTC5Q03897 1148 aa7.76□□□□□ -1.17
PRE3YJL001W YML083CQ04526 418 aa7.76□□□□□ -1.17
PRE3YJL001W ALR1Q08269 859 aa7.76□□□□□ -1.17
PRE3YJL001W ISF1P32488 338 aa7.75□□□□□ -1.17
PRE3YJL001W SRC1Q03707 834 aa7.75□□□□□ -1.17
PRE3YJL001W YPR097WQ06839 1073 aa7.75□□□□□ -1.17
PRE3YJL001W NOP8Q08287 484 aaPredicted RBP7.75□□□□□ -1.17
PRE3YJL001W PRT1P06103 763 aaKnown RBP7.74□□□□□ -1.17
PRE3YJL001W PEP12P32854 288 aa7.74□□□□□ -1.17
PRE3YJL001W JJJ2P46997 583 aa7.74□□□□□ -1.17
PRE3YJL001W PPM2Q08282 695 aa7.74□□□□□ -1.17
PRE3YJL001W PSF3Q12146 194 aa7.74□□□□□ -1.17
PRE3YJL001W PFK2P16862 959 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
PRE3YJL001W TEC1P18412 486 aa7.73□□□□□ -1.17
PRE3YJL001W RDS2P19541 446 aaKnown RBP7.73□□□□□ -1.17
PRE3YJL001W PAT1P25644 796 aaKnown RBP7.73□□□□□ -1.17
PRE3YJL001W CDC3P32457 520 aaKnown RBP7.73□□□□□ -1.17
PRE3YJL001W PAC1P39946 494 aaKnown RBP7.73□□□□□ -1.17
PRE3YJL001W SPR3P41901 512 aa7.73□□□□□ -1.17
PRE3YJL001W HXT10P43581 546 aa7.73□□□□□ -1.17
PRE3YJL001W YGR122WP53272 402 aa7.73□□□□□ -1.17
PRE3YJL001W GIN4Q12263 1142 aa7.73□□□□□ -1.17
PRE3YJL001W FLO1P32768 1537 aa7.73□□□□□ -1.17
PRE3YJL001W KEL1P38853 1164 aaKnown RBP7.72□□□□□ -1.17
PRE3YJL001W NUG1P40010 520 aaKnown RBP7.72□□□□□ -1.17
PRE3YJL001W KTR7P40504 517 aa7.72□□□□□ -1.17
PRE3YJL001W RRN7P40992 514 aa7.72□□□□□ -1.17
PRE3YJL001W KXD1P53158 218 aa7.72□□□□□ -1.17
PRE3YJL001W ADR1P07248 1323 aa7.72□□□□□ -1.17
PRE3YJL001W RAS1P01119 309 aa7.71□□□□□ -1.18
PRE3YJL001W PDC1P06169 563 aaKnown RBP7.71□□□□□ -1.18
PRE3YJL001W AMS1P22855 1083 aa7.71□□□□□ -1.18
PRE3YJL001W TPD3P31383 635 aa7.71□□□□□ -1.18
PRE3YJL001W GUT2P32191 649 aa7.71□□□□□ -1.18
PRE3YJL001W PAH1P32567 862 aa7.71□□□□□ -1.18
PRE3YJL001W FIG4P42837 879 aa7.71□□□□□ -1.18
PRE3YJL001W STE20Q03497 939 aaKnown RBP7.71□□□□□ -1.18
PRE3YJL001W RAD53P22216 821 aa7.7□□□□□ -1.18
PRE3YJL001W SWC3P31376 625 aa7.7□□□□□ -1.18
PRE3YJL001W RPT3P33298 428 aaKnown RBP7.7□□□□□ -1.18
PRE3YJL001W UBP12P39538 1254 aa7.7□□□□□ -1.18
PRE3YJL001W YFH7P43591 353 aa7.7□□□□□ -1.18
PRE3YJL001W ULP1Q02724 621 aa7.7□□□□□ -1.18
PRE3YJL001W SUP35P05453 685 aaKnown RBP7.69□□□□□ -1.18
PRE3YJL001W YVH1Q02256 364 aaKnown RBP7.69□□□□□ -1.18
PRE3YJL001W ECM23Q02710 187 aa7.69□□□□□ -1.18
PRE3YJL001W FRA1Q07825 749 aa7.69□□□□□ -1.18
PRE3YJL001W FBP1P09201 348 aa7.68□□□□□ -1.18
PRE3YJL001W MRF1P30775 413 aaPredicted RBP7.68□□□□□ -1.18
PRE3YJL001W RAD24P32641 659 aa7.68□□□□□ -1.18
PRE3YJL001W TPS3P38426 1054 aaKnown RBP7.68□□□□□ -1.18
PRE3YJL001W ERG7P38604 731 aa7.68□□□□□ -1.18
PRE3YJL001W ATG3P40344 310 aa7.68□□□□□ -1.18
PRE3YJL001W PSF2P40359 213 aa7.68□□□□□ -1.18
PRE3YJL001W YDL144CQ07589 356 aa7.68□□□□□ -1.18
PRE3YJL001W SNU66Q12420 587 aaPredicted RBP7.68□□□□□ -1.18
PRE3YJL001W SNF3P10870 884 aa7.67□□□□□ -1.18
PRE3YJL001W SPT16P32558 1035 aaKnown RBP7.67□□□□□ -1.18
PRE3YJL001W CLA4P48562 842 aa7.67□□□□□ -1.18
PRE3YJL001W YPR084WQ06821 456 aa7.67□□□□□ -1.18
PRE3YJL001W IXR1P33417 597 aa7.66□□□□□ -1.18
PRE3YJL001W GLO3P38682 493 aaKnown RBP7.66□□□□□ -1.18
PRE3YJL001W NET1P47035 1189 aa7.66□□□□□ -1.18
PRE3YJL001W YEL077CQ3E7X8 1277 aa7.66□□□□□ -1.18
PRE3YJL001W ADP1P25371 1049 aa7.65□□□□□ -1.18
PRE3YJL001W SLD2P34252 453 aa7.65□□□□□ -1.18
PRE3YJL001W APL6P46682 809 aa7.65□□□□□ -1.18
PRE3YJL001W PMA1P05030 918 aaKnown RBP7.64□□□□□ -1.19
PRE3YJL001W BOI2P39969 1040 aa7.64□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms