RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C GSC2P40989 1895 aa11.19□□□□□ -0.62
MET28YIR017C PCT1P13259 424 aa11.19□□□□□ -0.62
MET28YIR017C YHL017WP38745 532 aa11.19□□□□□ -0.62
MET28YIR017C VPS45P38932 577 aa11.19□□□□□ -0.62
MET28YIR017C TIF4631P39935 952 aaKnown RBP11.19□□□□□ -0.62
MET28YIR017C LYS14P40971 790 aa11.19□□□□□ -0.62
MET28YIR017C TUS1Q06412 1307 aa11.18□□□□□ -0.62
MET28YIR017C NUC1P08466 329 aa11.18□□□□□ -0.62
MET28YIR017C AKR1P39010 764 aa11.18□□□□□ -0.62
MET28YIR017C UBP9P39967 754 aa11.18□□□□□ -0.62
MET28YIR017C CSM2P40465 213 aa11.18□□□□□ -0.62
MET28YIR017C BUD6P41697 788 aa11.18□□□□□ -0.62
MET28YIR017C SOL4P53315 255 aa11.18□□□□□ -0.62
MET28YIR017C VPS20Q04272 221 aa11.18□□□□□ -0.62
MET28YIR017C SAM2P19358 384 aaKnown RBP11.17□□□□□ -0.62
MET28YIR017C RNR3P21672 869 aaKnown RBP11.17□□□□□ -0.62
MET28YIR017C SEC20P28791 383 aa11.17□□□□□ -0.62
MET28YIR017C TTI1P36097 1038 aa11.17□□□□□ -0.62
MET28YIR017C VAB2P40003 282 aa11.17□□□□□ -0.62
MET28YIR017C EPL1P43572 832 aa11.17□□□□□ -0.62
MET28YIR017C CTF18P49956 741 aa11.17□□□□□ -0.62
MET28YIR017C YOR111WQ99210 232 aa11.17□□□□□ -0.62
MET28YIR017C HVG1P0CE11 249 aa11.16□□□□□ -0.62
MET28YIR017C KRS1P15180 591 aaKnown RBP11.16□□□□□ -0.62
MET28YIR017C BMH2P34730 273 aaKnown RBP11.16□□□□□ -0.62
MET28YIR017C ENT3P47160 408 aa11.16□□□□□ -0.62
MET28YIR017C HCA4P20448 770 aaKnown RBP11.15□□□□□ -0.62
MET28YIR017C PER1P25625 357 aa11.15□□□□□ -0.62
MET28YIR017C MCD4P36051 919 aa11.15□□□□□ -0.62
MET28YIR017C TOM71P38825 639 aaKnown RBP11.15□□□□□ -0.62
MET28YIR017C LSB1P53281 241 aa11.15□□□□□ -0.62
MET28YIR017C FBP1P09201 348 aa11.14□□□□□ -0.63
MET28YIR017C RSC30P38781 883 aa11.14□□□□□ -0.63
MET28YIR017C TPM2P40414 161 aa11.14□□□□□ -0.63
MET28YIR017C NET1P47035 1189 aa11.14□□□□□ -0.63
MET28YIR017C PEX14P53112 341 aa11.14□□□□□ -0.63
MET28YIR017C MDM1Q01846 1127 aa11.14□□□□□ -0.63
MET28YIR017C RBA50Q04418 439 aa11.14□□□□□ -0.63
MET28YIR017C CST9Q06032 482 aa11.14□□□□□ -0.63
MET28YIR017C YLR407WQ06070 228 aa11.14□□□□□ -0.63
MET28YIR017C ELG1Q12050 791 aa11.14□□□□□ -0.63
MET28YIR017C CIT1P00890 479 aa11.13□□□□□ -0.63
MET28YIR017C BIK1P11709 440 aa11.13□□□□□ -0.63
MET28YIR017C SPB4P25808 606 aaPredicted RBP11.13□□□□□ -0.63
MET28YIR017C NPA3P47122 385 aa11.13□□□□□ -0.63
MET28YIR017C GDE1Q02979 1223 aa11.13□□□□□ -0.63
MET28YIR017C JIP4Q03361 876 aa11.13□□□□□ -0.63
MET28YIR017C YML037CQ03703 340 aa11.13□□□□□ -0.63
MET28YIR017C YDR341CQ05506 607 aaKnown RBP11.13□□□□□ -0.63
MET28YIR017C DSE3Q08729 430 aa11.13□□□□□ -0.63
MET28YIR017C SRP54P20424 541 aaKnown RBP11.12□□□□□ -0.63
MET28YIR017C CBP3P21560 335 aa11.12□□□□□ -0.63
MET28YIR017C DIT2P21595 489 aa11.12□□□□□ -0.63
MET28YIR017C YDJ1P25491 409 aaKnown RBP11.12□□□□□ -0.63
MET28YIR017C ETP1P38748 585 aaKnown RBP11.12□□□□□ -0.63
MET28YIR017C RPN10P38886 268 aaKnown RBP11.12□□□□□ -0.63
MET28YIR017C YJL007CP47080 104 aa11.12□□□□□ -0.63
MET28YIR017C SWI4P25302 1093 aaKnown RBP11.11□□□□□ -0.63
MET28YIR017C VPS24P36095 224 aaKnown RBP11.11□□□□□ -0.63
MET28YIR017C APE3P37302 537 aaKnown RBP11.11□□□□□ -0.63
MET28YIR017C RXT2P38255 430 aa11.11□□□□□ -0.63
MET28YIR017C UTP4Q06679 776 aaKnown RBP11.11□□□□□ -0.63
MET28YIR017C LSP1Q12230 341 aaKnown RBP11.11□□□□□ -0.63
MET28YIR017C TIF6Q12522 245 aaKnown RBP11.11□□□□□ -0.63
MET28YIR017C MET6P05694 767 aaKnown RBP11.1□□□□□ -0.63
MET28YIR017C RPL8AP17076 256 aaKnown RBP11.1□□□□□ -0.63
MET28YIR017C PWP2P25635 923 aaKnown RBP11.1□□□□□ -0.63
MET28YIR017C PCI8P40512 444 aa11.1□□□□□ -0.63
MET28YIR017C VIP1Q06685 1146 aaKnown RBP11.1□□□□□ -0.63
MET28YIR017C CFT2Q12102 859 aaPredicted RBP11.1□□□□□ -0.63
MET28YIR017C YPL150WQ12152 901 aa11.1□□□□□ -0.63
MET28YIR017C CEX1Q12453 761 aa11.1□□□□□ -0.63
MET28YIR017C HSP82P02829 709 aaKnown RBP11.09□□□□□ -0.63
MET28YIR017C CPA2P03965 1118 aaKnown RBP11.09□□□□□ -0.63
MET28YIR017C RAD18P10862 487 aa11.09□□□□□ -0.63
MET28YIR017C PRX1P34227 261 aaKnown RBP11.09□□□□□ -0.63
MET28YIR017C YKR018CP36114 725 aa11.09□□□□□ -0.63
MET28YIR017C RFC5P38251 354 aa11.09□□□□□ -0.63
MET28YIR017C YAF9P53930 226 aa11.09□□□□□ -0.63
MET28YIR017C UBX5Q06682 500 aa11.09□□□□□ -0.63
MET28YIR017C ASF1P32447 279 aa11.08□□□□□ -0.64
MET28YIR017C CCT3P39077 534 aaKnown RBP11.08□□□□□ -0.64
MET28YIR017C SPR3P41901 512 aa11.08□□□□□ -0.64
MET28YIR017C STI1P15705 589 aaKnown RBP RIP-Chip data11.07□□□□□ -0.64not detected
MET28YIR017C VMA2P16140 517 aaKnown RBP11.07□□□□□ -0.64
MET28YIR017C ASH1P34233 588 aa11.07□□□□□ -0.64
MET28YIR017C PHO88P38264 188 aaPredicted RBP11.07□□□□□ -0.64
MET28YIR017C YGL081WP53156 320 aa11.07□□□□□ -0.64
MET28YIR017C PIL1P53252 339 aaKnown RBP11.07□□□□□ -0.64
MET28YIR017C NAF1P53919 492 aaKnown RBP11.07□□□□□ -0.64
MET28YIR017C ALD6P54115 500 aaKnown RBP11.07□□□□□ -0.64
MET28YIR017C SUE1Q06524 206 aa11.07□□□□□ -0.64
MET28YIR017C TOM1Q03280 3268 aa11.07□□□□□ -0.64
MET28YIR017C PGI1P12709 554 aaKnown RBP11.06□□□□□ -0.64
MET28YIR017C MAK11P20484 414 aaKnown RBP11.06□□□□□ -0.64
MET28YIR017C MOT2P34909 587 aaKnown RBP11.06□□□□□ -0.64
MET28YIR017C ERG7P38604 731 aa11.06□□□□□ -0.64
MET28YIR017C HRQ1Q05549 1077 aa11.06□□□□□ -0.64
MET28YIR017C NBL1Q3E7Y6 73 aa11.06□□□□□ -0.64
MET28YIR017C CDC60P26637 1090 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms