RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W GCD6P32501 712 aaKnown RBP7.13□□□□□ -1.27
SEC28YIL076W IPL1P38991 367 aa7.13□□□□□ -1.27
SEC28YIL076W RVS167P39743 482 aaKnown RBP7.13□□□□□ -1.27
SEC28YIL076W UTP22P53254 1237 aaPredicted RBP7.13□□□□□ -1.27
SEC28YIL076W SEC20P28791 383 aa7.12□□□□□ -1.27
SEC28YIL076W MAC1P35192 417 aa7.12□□□□□ -1.27
SEC28YIL076W YKR073CP36153 106 aa7.12□□□□□ -1.27
SEC28YIL076W OMA1P36163 345 aa7.12□□□□□ -1.27
SEC28YIL076W YGR130CP53278 816 aa7.12□□□□□ -1.27
SEC28YIL076W SEN54Q02825 467 aaPredicted RBP7.12□□□□□ -1.27
SEC28YIL076W YLL054CQ12244 843 aa7.12□□□□□ -1.27
SEC28YIL076W TY1A-LR4P0C2I8 440 aaKnown RBP7.11□□□□□ -1.27
SEC28YIL076W TY1A-DR6P0CX70 440 aa7.11□□□□□ -1.27
SEC28YIL076W TY1A-ER1P0CX71 440 aa7.11□□□□□ -1.27
SEC28YIL076W TY1A-LR2P0CX72 440 aa7.11□□□□□ -1.27
SEC28YIL076W TY1A-PLP0CX73 440 aa7.11□□□□□ -1.27
SEC28YIL076W TY1A-JR1P0CX74 440 aa7.11□□□□□ -1.27
SEC28YIL076W TY1A-LR3P0CX75 440 aa7.11□□□□□ -1.27
SEC28YIL076W TY1A-ML2P0CX76 440 aa7.11□□□□□ -1.27
SEC28YIL076W VPS35P34110 944 aa7.11□□□□□ -1.27
SEC28YIL076W GPT2P36148 743 aa7.11□□□□□ -1.27
SEC28YIL076W MEC3Q02574 474 aa7.11□□□□□ -1.27
SEC28YIL076W DOT1Q04089 582 aaKnown RBP7.11□□□□□ -1.27
SEC28YIL076W MED7Q08278 222 aa7.11□□□□□ -1.27
SEC28YIL076W TY1A-GR1Q12085 440 aa7.11□□□□□ -1.27
SEC28YIL076W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.11□□□□□ -1.27
SEC28YIL076W TY1A-OLQ92392 440 aaKnown RBP7.11□□□□□ -1.27
SEC28YIL076W DAK2P43550 591 aa7.1□□□□□ -1.27
SEC28YIL076W INP52P50942 1183 aa7.1□□□□□ -1.27
SEC28YIL076W GIC2Q06648 383 aa7.1□□□□□ -1.27
SEC28YIL076W ALG6Q12001 544 aaKnown RBP7.1□□□□□ -1.27
SEC28YIL076W PRP40P33203 583 aaKnown RBP7.09□□□□□ -1.27
SEC28YIL076W REI1P38344 393 aaPredicted RBP7.09□□□□□ -1.27
SEC28YIL076W UGA4P32837 571 aa7.08□□□□□ -1.28
SEC28YIL076W TOS1P38288 455 aa7.08□□□□□ -1.28
SEC28YIL076W DAL4Q04895 635 aa7.08□□□□□ -1.28
SEC28YIL076W EXO5P38289 585 aa7.07□□□□□ -1.28
SEC28YIL076W SPO74P45819 413 aa7.07□□□□□ -1.28
SEC28YIL076W TOS4Q06266 489 aa7.07□□□□□ -1.28
SEC28YIL076W MSB1P21339 1137 aaKnown RBP7.06□□□□□ -1.28
SEC28YIL076W YKL077WP36081 392 aa7.06□□□□□ -1.28
SEC28YIL076W YML020WQ03722 664 aa7.06□□□□□ -1.28
SEC28YIL076W CYC7P00045 113 aa7.05□□□□□ -1.28
SEC28YIL076W RPT1P33299 467 aaKnown RBP7.05□□□□□ -1.28
SEC28YIL076W SHU2P38957 223 aa7.05□□□□□ -1.28
SEC28YIL076W OXR1Q08952 273 aa7.05□□□□□ -1.28
SEC28YIL076W ARL1P38116 183 aaKnown RBP7.04□□□□□ -1.28
SEC28YIL076W ULP1Q02724 621 aa7.04□□□□□ -1.28
SEC28YIL076W NOG1Q02892 647 aaKnown RBP7.04□□□□□ -1.28
SEC28YIL076W KAR2P16474 682 aaKnown RBP7.03□□□□□ -1.28
SEC28YIL076W LIP5P32875 414 aa7.03□□□□□ -1.28
SEC28YIL076W SLD2P34252 453 aa7.03□□□□□ -1.28
SEC28YIL076W WHI3P34761 661 aaKnown RBP7.03□□□□□ -1.28
SEC28YIL076W NEM1P38757 446 aa7.03□□□□□ -1.28
SEC28YIL076W MMM1P41800 426 aa7.03□□□□□ -1.28
SEC28YIL076W SLS1P42900 643 aa7.03□□□□□ -1.28
SEC28YIL076W RSM26P47141 266 aa7.03□□□□□ -1.28
SEC28YIL076W PEX13P80667 386 aa7.03□□□□□ -1.28
SEC28YIL076W MSH3P25336 1018 aa7.02□□□□□ -1.29
SEC28YIL076W SQT1P35184 431 aa7.02□□□□□ -1.29
SEC28YIL076W FAA3P39002 694 aa7.02□□□□□ -1.29
SEC28YIL076W MSH4P40965 878 aaPredicted RBP7.02□□□□□ -1.29
SEC28YIL076W YGR045CP53229 120 aa7.02□□□□□ -1.29
SEC28YIL076W ELA1P53861 379 aaPredicted RBP7.02□□□□□ -1.29
SEC28YIL076W AVO1Q08236 1176 aa7.02□□□□□ -1.29
SEC28YIL076W RPS4AP0CX35 261 aaKnown RBP7.01□□□□□ -1.29
SEC28YIL076W RPS4BP0CX36 261 aaKnown RBP7.01□□□□□ -1.29
SEC28YIL076W PUB1P32588 453 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
SEC28YIL076W CIT3P43635 486 aa7.01□□□□□ -1.29
SEC28YIL076W CTH1P47976 325 aa7.01□□□□□ -1.29
SEC28YIL076W MAG2Q06436 670 aaKnown RBP7.01□□□□□ -1.29
SEC28YIL076W BRE4Q07660 1125 aa7□□□□□ -1.29
SEC28YIL076W GCD1P09032 578 aaPredicted RBP6.99□□□□□ -1.29
SEC28YIL076W MTR4P47047 1073 aaKnown RBP6.99□□□□□ -1.29
SEC28YIL076W ALT1P52893 592 aa6.99□□□□□ -1.29
SEC28YIL076W SDH1Q00711 640 aa6.99□□□□□ -1.29
SEC28YIL076W NOP8Q08287 484 aaPredicted RBP6.99□□□□□ -1.29
SEC28YIL076W PEX28P38848 579 aa6.98□□□□□ -1.29
SEC28YIL076W YPL109CQ02981 657 aa6.98□□□□□ -1.29
SEC28YIL076W EAR1Q03212 550 aa6.98□□□□□ -1.29
SEC28YIL076W HXK1P04806 485 aaKnown RBP6.97□□□□□ -1.29
SEC28YIL076W NFS1P25374 497 aa6.97□□□□□ -1.29
SEC28YIL076W SMY2P32909 740 aaKnown RBP6.97□□□□□ -1.29
SEC28YIL076W RCM1P53972 490 aa6.97□□□□□ -1.29
SEC28YIL076W ADI1Q03677 179 aa6.97□□□□□ -1.29
SEC28YIL076W UTP5Q04177 643 aaKnown RBP6.97□□□□□ -1.29
SEC28YIL076W NNK1P36003 928 aa6.96□□□□□ -1.3
SEC28YIL076W SEA4P38164 1038 aa6.96□□□□□ -1.3
SEC28YIL076W YAR028WP39548 234 aa6.96□□□□□ -1.3
SEC28YIL076W XKS1P42826 600 aa6.96□□□□□ -1.3
SEC28YIL076W YOR059CQ08448 450 aaKnown RBP6.96□□□□□ -1.3
SEC28YIL076W VMA4P22203 233 aaKnown RBP6.95□□□□□ -1.3
SEC28YIL076W POL32P47110 350 aa6.95□□□□□ -1.3
SEC28YIL076W NSI1Q12457 570 aa6.95□□□□□ -1.3
SEC28YIL076W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
SEC28YIL076W OYE3P41816 400 aaPredicted RBP6.94□□□□□ -1.3
SEC28YIL076W ATE1P16639 503 aa6.93□□□□□ -1.3
SEC28YIL076W YGL140CP53120 1219 aa6.93□□□□□ -1.3
SEC28YIL076W YGR122WP53272 402 aa6.93□□□□□ -1.3
SEC28YIL076W YVC1Q12324 675 aa6.93□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms