RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C RNR3P21672 869 aaKnown RBP3.43□□□□□ -1.86
NMD2YHR077C PFF1P38244 976 aa3.43□□□□□ -1.86
NMD2YHR077C RTS1P38903 757 aa3.43□□□□□ -1.86
NMD2YHR077C HSP82P02829 709 aaKnown RBP3.43□□□□□ -1.86
NMD2YHR077C ARG82P07250 355 aa3.43□□□□□ -1.86
NMD2YHR077C TPM1P17536 199 aaKnown RBP3.43□□□□□ -1.86
NMD2YHR077C MIC60P36112 540 aa3.43□□□□□ -1.86
NMD2YHR077C UTP7P40055 554 aaKnown RBP3.43□□□□□ -1.86
NMD2YHR077C DAK2P43550 591 aa3.43□□□□□ -1.86
NMD2YHR077C STU2P46675 888 aa3.43□□□□□ -1.86
NMD2YHR077C AIP1P46680 615 aaKnown RBP3.43□□□□□ -1.86
NMD2YHR077C RAD61Q99359 647 aa3.43□□□□□ -1.86
NMD2YHR077C RPL22AP05749 121 aaKnown RBP3.42□□□□□ -1.86
NMD2YHR077C HCA4P20448 770 aaKnown RBP3.42□□□□□ -1.86
NMD2YHR077C BMH1P29311 267 aaKnown RBP3.42□□□□□ -1.86
NMD2YHR077C VID27P40157 782 aa3.42□□□□□ -1.86
NMD2YHR077C YGR153WP48238 217 aa3.42□□□□□ -1.86
NMD2YHR077C LSC2P53312 427 aa3.42□□□□□ -1.86
NMD2YHR077C ESF1Q06344 628 aaKnown RBP3.42□□□□□ -1.86
NMD2YHR077C SES1P07284 462 aaKnown RBP3.42□□□□□ -1.86
NMD2YHR077C ALG1P16661 449 aa3.42□□□□□ -1.86
NMD2YHR077C RPN1P38764 993 aaKnown RBP3.42□□□□□ -1.86
NMD2YHR077C THI6P41835 540 aa3.42□□□□□ -1.86
NMD2YHR077C VMS1Q04311 632 aaKnown RBP3.42□□□□□ -1.86
NMD2YHR077C CST9Q06032 482 aa3.42□□□□□ -1.86
NMD2YHR077C SKG3Q06315 1026 aa3.42□□□□□ -1.86
NMD2YHR077C HIR1P32479 840 aa3.41□□□□□ -1.86
NMD2YHR077C YKT6P36015 200 aaKnown RBP3.41□□□□□ -1.86
NMD2YHR077C PCH2P38126 564 aa3.41□□□□□ -1.86
NMD2YHR077C HFM1P51979 1187 aa3.41□□□□□ -1.86
NMD2YHR077C FAR11P53917 953 aa3.41□□□□□ -1.86
NMD2YHR077C MMR1Q06324 491 aa3.41□□□□□ -1.86
NMD2YHR077C YOL075CQ08234 1294 aa3.41□□□□□ -1.86
NMD2YHR077C TUS1Q06412 1307 aa3.41□□□□□ -1.86
NMD2YHR077C SSA2P10592 639 aaKnown RBP3.41□□□□□ -1.86
NMD2YHR077C STI1P15705 589 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
NMD2YHR077C RGP1P16664 663 aa3.41□□□□□ -1.86
NMD2YHR077C RIT1P23796 513 aa3.41□□□□□ -1.86
NMD2YHR077C EBP2P36049 427 aaKnown RBP3.41□□□□□ -1.86
NMD2YHR077C YBL086CP38177 466 aa3.41□□□□□ -1.86
NMD2YHR077C RRM3P38766 723 aa3.41□□□□□ -1.86
NMD2YHR077C YGR237CP50089 785 aa3.41□□□□□ -1.86
NMD2YHR077C AFT2Q08957 416 aa3.41□□□□□ -1.86
NMD2YHR077C HXK1P04806 485 aaKnown RBP3.41□□□□□ -1.86
NMD2YHR077C ATG32P40458 529 aa3.41□□□□□ -1.86
NMD2YHR077C MSH4P40965 878 aaPredicted RBP3.41□□□□□ -1.86
NMD2YHR077C MTC3P53077 123 aa3.41□□□□□ -1.86
NMD2YHR077C PRP42Q03776 544 aaKnown RBP3.41□□□□□ -1.86
NMD2YHR077C ETT1Q08421 412 aaKnown RBP3.41□□□□□ -1.86
NMD2YHR077C TOM1Q03280 3268 aa3.41□□□□□ -1.86
NMD2YHR077C HOP09932 586 aa3.4□□□□□ -1.86
NMD2YHR077C CHS3P29465 1165 aa3.4□□□□□ -1.86
NMD2YHR077C YKR023WP36119 530 aaKnown RBP3.4□□□□□ -1.86
NMD2YHR077C UBP5P39944 805 aa3.4□□□□□ -1.86
NMD2YHR077C YJL181WP46987 611 aa3.4□□□□□ -1.86
NMD2YHR077C DSE3Q08729 430 aa3.4□□□□□ -1.86
NMD2YHR077C SPO11P23179 398 aa3.4□□□□□ -1.87
NMD2YHR077C RPS7AP26786 190 aaKnown RBP3.4□□□□□ -1.87
NMD2YHR077C MAL31P38156 614 aa3.4□□□□□ -1.87
NMD2YHR077C BCD1P38772 366 aa3.4□□□□□ -1.87
NMD2YHR077C STT3P39007 718 aaKnown RBP3.4□□□□□ -1.87
NMD2YHR077C BOP3P53958 396 aa3.4□□□□□ -1.87
NMD2YHR077C COG4Q06096 861 aa3.4□□□□□ -1.87
NMD2YHR077C ISY1P21374 235 aaPredicted RBP3.39□□□□□ -1.87
NMD2YHR077C STE11P23561 717 aa3.39□□□□□ -1.87
NMD2YHR077C ASF1P32447 279 aa3.39□□□□□ -1.87
NMD2YHR077C YET1P35723 206 aa3.39□□□□□ -1.87
NMD2YHR077C RTT107P38850 1070 aa3.39□□□□□ -1.87
NMD2YHR077C GTT3P39996 337 aa3.39□□□□□ -1.87
NMD2YHR077C MGA2P40578 1113 aa3.39□□□□□ -1.87
NMD2YHR077C EAF6P47128 113 aa3.39□□□□□ -1.87
NMD2YHR077C VPS75P53853 264 aa3.39□□□□□ -1.87
NMD2YHR077C MDM1Q01846 1127 aa3.39□□□□□ -1.87
NMD2YHR077C MDL2P33311 773 aa3.39□□□□□ -1.87
NMD2YHR077C NDT80P38830 627 aa3.39□□□□□ -1.87
NMD2YHR077C TAD1P53065 400 aa3.39□□□□□ -1.87
NMD2YHR077C RET3P53600 189 aa3.39□□□□□ -1.87
NMD2YHR077C NAF1P53919 492 aaKnown RBP3.39□□□□□ -1.87
NMD2YHR077C RPT6Q01939 405 aaKnown RBP3.39□□□□□ -1.87
NMD2YHR077C HOS3Q02959 697 aaKnown RBP3.39□□□□□ -1.87
NMD2YHR077C GIS4Q04233 774 aa3.39□□□□□ -1.87
NMD2YHR077C MCM16Q12262 181 aa3.39□□□□□ -1.87
NMD2YHR077C PDC1P06169 563 aaKnown RBP3.39□□□□□ -1.87
NMD2YHR077C NUC1P08466 329 aa3.39□□□□□ -1.87
NMD2YHR077C YEL076C-AP0CX16 216 aa3.39□□□□□ -1.87
NMD2YHR077C YLR464WP0CX17 216 aa3.39□□□□□ -1.87
NMD2YHR077C RPS6AP0CX37 236 aaKnown RBP3.39□□□□□ -1.87
NMD2YHR077C RPS6BP0CX38 236 aaPredicted RBP3.39□□□□□ -1.87
NMD2YHR077C TUP1P16649 713 aa3.39□□□□□ -1.87
NMD2YHR077C YEL076CP39971 216 aa3.39□□□□□ -1.87
NMD2YHR077C CEP3P40969 608 aa3.39□□□□□ -1.87
NMD2YHR077C APL6P46682 809 aa3.39□□□□□ -1.87
NMD2YHR077C RSM7P47150 247 aa3.39□□□□□ -1.87
NMD2YHR077C ASE1P50275 885 aa3.39□□□□□ -1.87
NMD2YHR077C GDE1Q02979 1223 aa3.39□□□□□ -1.87
NMD2YHR077C SAS4Q04003 481 aa3.39□□□□□ -1.87
NMD2YHR077C UBP1P25037 809 aa3.38□□□□□ -1.87
NMD2YHR077C CDC15P27636 974 aa3.38□□□□□ -1.87
NMD2YHR077C NOC2P39744 710 aaKnown RBP3.38□□□□□ -1.87
NMD2YHR077C BRE2P43132 505 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms