RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W EAR1Q03212 550 aa4.98□□□□□ -1.61
RTT102YGR275W TRE1Q08919 783 aa4.98□□□□□ -1.61
RTT102YGR275W CMR1Q12510 522 aaKnown RBP4.98□□□□□ -1.61
RTT102YGR275W PRO1P32264 428 aa4.97□□□□□ -1.61
RTT102YGR275W RIM11P38615 370 aa4.97□□□□□ -1.61
RTT102YGR275W GLO3P38682 493 aaKnown RBP4.97□□□□□ -1.61
RTT102YGR275W ALT1P52893 592 aa4.97□□□□□ -1.61
RTT102YGR275W UTP22P53254 1237 aaPredicted RBP4.97□□□□□ -1.61
RTT102YGR275W MEC3Q02574 474 aa4.97□□□□□ -1.61
RTT102YGR275W MSH6Q03834 1242 aa4.96□□□□□ -1.62
RTT102YGR275W NFS1P25374 497 aa4.95□□□□□ -1.62
RTT102YGR275W UFD2P54860 961 aa4.95□□□□□ -1.62
RTT102YGR275W YVC1Q12324 675 aa4.95□□□□□ -1.62
RTT102YGR275W DUR3P33413 735 aa4.94□□□□□ -1.62
RTT102YGR275W ELA1P53861 379 aaPredicted RBP4.94□□□□□ -1.62
RTT102YGR275W SMY2P32909 740 aaKnown RBP4.93□□□□□ -1.62
RTT102YGR275W THI80P35202 319 aa4.93□□□□□ -1.62
RTT102YGR275W PTC7P38797 343 aa4.93□□□□□ -1.62
RTT102YGR275W QDR1P40475 563 aa4.93□□□□□ -1.62
RTT102YGR275W ORC3P54790 616 aa4.93□□□□□ -1.62
RTT102YGR275W RSC4Q02206 625 aa4.93□□□□□ -1.62
RTT102YGR275W KAR5Q04746 504 aa4.93□□□□□ -1.62
RTT102YGR275W LPX1Q12405 387 aaKnown RBP4.93□□□□□ -1.62
RTT102YGR275W AIM3P38266 947 aaKnown RBP4.92□□□□□ -1.62
RTT102YGR275W PEX7P39108 375 aa4.92□□□□□ -1.62
RTT102YGR275W AVO1Q08236 1176 aa4.92□□□□□ -1.62
RTT102YGR275W PRP6P19735 899 aaPredicted RBP4.91□□□□□ -1.62
RTT102YGR275W PRP5P21372 849 aaPredicted RBP4.91□□□□□ -1.62
RTT102YGR275W GTS1P40956 396 aa4.91□□□□□ -1.62
RTT102YGR275W YGR045CP53229 120 aa4.91□□□□□ -1.62
RTT102YGR275W FLR1P38124 548 aa4.9□□□□□ -1.63
RTT102YGR275W BSC2Q05611 235 aa4.9□□□□□ -1.63
RTT102YGR275W NNK1P36003 928 aa4.89□□□□□ -1.63
RTT102YGR275W MRPL22P53881 309 aa4.89□□□□□ -1.63
RTT102YGR275W TY1A-LR4P0C2I8 440 aaKnown RBP4.88□□□□□ -1.63
RTT102YGR275W TY1A-DR6P0CX70 440 aa4.88□□□□□ -1.63
RTT102YGR275W TY1A-ER1P0CX71 440 aa4.88□□□□□ -1.63
RTT102YGR275W TY1A-LR2P0CX72 440 aa4.88□□□□□ -1.63
RTT102YGR275W TY1A-PLP0CX73 440 aa4.88□□□□□ -1.63
RTT102YGR275W TY1A-JR1P0CX74 440 aa4.88□□□□□ -1.63
RTT102YGR275W TY1A-LR3P0CX75 440 aa4.88□□□□□ -1.63
RTT102YGR275W TY1A-ML2P0CX76 440 aa4.88□□□□□ -1.63
RTT102YGR275W PMT7Q06644 662 aa4.88□□□□□ -1.63
RTT102YGR275W TY1A-GR1Q12085 440 aa4.88□□□□□ -1.63
RTT102YGR275W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.88□□□□□ -1.63
RTT102YGR275W TY1A-OLQ92392 440 aaKnown RBP4.88□□□□□ -1.63
RTT102YGR275W FLP1P03870 423 aa4.87□□□□□ -1.63
RTT102YGR275W MCM5P29496 775 aaKnown RBP4.87□□□□□ -1.63
RTT102YGR275W ETP1P38748 585 aaKnown RBP4.87□□□□□ -1.63
RTT102YGR275W YAF9P53930 226 aa4.87□□□□□ -1.63
RTT102YGR275W YNL011CP53980 444 aa4.87□□□□□ -1.63
RTT102YGR275W TPP1Q03796 238 aa4.87□□□□□ -1.63
RTT102YGR275W SUB2Q07478 446 aaKnown RBP4.87□□□□□ -1.63
RTT102YGR275W YDL177CQ12257 170 aa4.87□□□□□ -1.63
RTT102YGR275W NUT1P53114 1132 aa4.86□□□□□ -1.63
RTT102YGR275W TRS120Q04183 1289 aa4.86□□□□□ -1.63
RTT102YGR275W PUS7Q08647 676 aaKnown RBP4.86□□□□□ -1.63
RTT102YGR275W ARL1P38116 183 aaKnown RBP4.85□□□□□ -1.63
RTT102YGR275W SAP155P43612 1002 aa4.85□□□□□ -1.63
RTT102YGR275W ATG1P53104 897 aa4.85□□□□□ -1.63
RTT102YGR275W MON1P53129 644 aa4.85□□□□□ -1.63
RTT102YGR275W RIM8P53179 542 aa4.85□□□□□ -1.63
RTT102YGR275W RPL34AP87262 121 aaPredicted RBP4.85□□□□□ -1.63
RTT102YGR275W HDA2Q06629 674 aa4.85□□□□□ -1.63
RTT102YGR275W YKL077WP36081 392 aa4.84□□□□□ -1.63
RTT102YGR275W NMD3P38861 518 aaKnown RBP4.84□□□□□ -1.63
RTT102YGR275W CDC55Q00362 526 aa4.84□□□□□ -1.63
RTT102YGR275W INP54Q08227 384 aaKnown RBP4.84□□□□□ -1.63
RTT102YGR275W TOD6P34219 525 aa4.83□□□□□ -1.64
RTT102YGR275W FOL2P51601 243 aaKnown RBP4.83□□□□□ -1.64
RTT102YGR275W SLS1P42900 643 aa4.82□□□□□ -1.64
RTT102YGR275W ACF4P47129 309 aa4.82□□□□□ -1.64
RTT102YGR275W MNL2Q12205 849 aa4.82□□□□□ -1.64
RTT102YGR275W EXO5P38289 585 aa4.81□□□□□ -1.64
RTT102YGR275W YHL012WP38709 493 aa4.81□□□□□ -1.64
RTT102YGR275W YAR028WP39548 234 aa4.81□□□□□ -1.64
RTT102YGR275W YLR257WQ06146 321 aaKnown RBP4.81□□□□□ -1.64
RTT102YGR275W SOD2P00447 233 aa4.8□□□□□ -1.64
RTT102YGR275W RPS13P05756 151 aaKnown RBP4.8□□□□□ -1.64
RTT102YGR275W SHU2P38957 223 aa4.8□□□□□ -1.64
RTT102YGR275W RVS167P39743 482 aaKnown RBP4.8□□□□□ -1.64
RTT102YGR275W SNO2P53823 222 aa4.8□□□□□ -1.64
RTT102YGR275W YPL277CQ08989 487 aa4.8□□□□□ -1.64
RTT102YGR275W AIM26P32858 118 aa4.79□□□□□ -1.64
RTT102YGR275W NEM1P38757 446 aa4.79□□□□□ -1.64
RTT102YGR275W MTR4P47047 1073 aaKnown RBP4.79□□□□□ -1.64
RTT102YGR275W SAM35P14693 329 aa4.78□□□□□ -1.64
RTT102YGR275W RET1P22276 1149 aaKnown RBP4.78□□□□□ -1.64
RTT102YGR275W GRS1P38088 690 aaKnown RBP4.77□□□□□ -1.65
RTT102YGR275W ATG14P38270 344 aa4.77□□□□□ -1.65
RTT102YGR275W HSE1P38753 452 aa4.77□□□□□ -1.65
RTT102YGR275W NOC3Q07896 663 aaPredicted RBP4.77□□□□□ -1.65
RTT102YGR275W HRK1Q08732 759 aaKnown RBP4.77□□□□□ -1.65
RTT102YGR275W MDL2P33311 773 aa4.76□□□□□ -1.65
RTT102YGR275W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
RTT102YGR275W XKS1P42826 600 aa4.75□□□□□ -1.65
RTT102YGR275W YNR063WP53749 607 aa4.75□□□□□ -1.65
RTT102YGR275W CLU1Q03690 1277 aaKnown RBP4.75□□□□□ -1.65
RTT102YGR275W GIS1Q03833 894 aa4.75□□□□□ -1.65
RTT102YGR275W GSF2Q04697 403 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms